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HOWTOs/jupyter-setup.md

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Installation Installation of Kernels Configuring Extensions
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Installation

python3 -m venv mypython
source mypython/bin/activate
pip install --upgrade pip
pip install Jupiterlab

Installation of Kernels

For the R kernel:

R> install.packages(c('repr', 'IRdisplay', 'evaluate', 'crayon', 'pbdZMQ', 'devtools', 'uuid', 'digest'))
R> devtools::install_github('IRkernel/IRkernel')

For the Julia kernel:

julia> Pkg.add("IJulia")

Configuring

jupyter notebook --generate-config

generate passwd using python3

cd ~/.jupyter
openssl req -x509 -nodes -days 3650 -newkey rsa:2048 -keyout mykey.key -out mycert.pem

see uncommented lines in my .jupyter/jupyter_notebook_config.py

grep -v "^#" jupyter_notebook_config.py |grep "c"

c.NotebookApp.certfile = u'/home/arndt/.jupyter/mycert.pem'
c.NotebookApp.ip = '*'
c.NotebookApp.keyfile = u'/home/arndt/.jupyter/mykey.key'
c.NotebookApp.open_browser = False
c.NotebookApp.password = u'sha1:aaaaaaaaaaaaaaabbbbbababababababababa'
c.NotebookApp.port = 11001

For a newer node version - needed during upgrade

export PATH=/usr/share/atom/resources/app/apm/bin:$PATH
export PATH=/home/arndt/tmp/node-v8.11.3-linux-x64/bin:$PATH

Extensions

to see plotly plot:

jupyter labextension install @jupyterlab/plotly-extension