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# shinyCalibration
#' - in order to make apps remember the following
#'
#' 1. Avoid wiping global name space
#' 2. Avoid saving .RDS or .RData files of intermediate results
#' 3. Rename main script to app.R
#'
#'
#' Otherwise fairly straight forward
#'
#' Second upload: heatmaps
#' - calculate per cutoff value seq(0.2, 1, 0.05) for relative error (log-scale)
#' - recursive fitting with elimination
#' - several options of plotting heatmaps
#'
#' Done:
#' - plot calibration curve with highlighting rejected points - at user specified cutoff: done
#' - pre-calculate curve: done
#' - output: use specified cutoff to calculate conversion factor: done
#' - what to do with compounds that do not have any points left or where R2 is bad?: done
#'
#' Remaining Issues
#' - output: check for extrapolation given cutoff done
#' - should this become part of supershiny? (maybe not)
#'
#' Future convetions
#' - CONC always ng / mL; done
#' - calculate nM; done
#' - no need to specify units; done
#' - assume injection volume the same for calibration and sample; yes
#' - one dilution factor for all samples can be given at the end; indeed