DCCul.xml

<?xml version="1.0"?>
<?xml-stylesheet type="text/css" href="http://deep.mpi-inf.mpg.de/DAC/files/style/deep_process_style.css"?>
<process>

	<name>DCC</name>
	<version>1</version>
	<author>
		<name>Peter Ebert</name>
		<email>pebert@mpi-inf.mpg.de</email>
	</author>
	<description>
		This is a mock-up document that merely exists to facilitate data management via the
		DAC-internal tracking database (i.e., all files uploaded from the DAC to the DCC
		are eventually input to this process/analysis).
	</description>

	<inputs>
		<filetype>
			<identifier>UPLOADFILE</identifier>
			<format>tar.gz</format>
			<quantity>single</quantity>
			<comment>By default, md5 checksum is also uploaded</comment>
		</filetype>
	</inputs>

	<references>
		<filetype>
			<identifier>no_ref</identifier>
			<format>none</format>
			<quantity>single</quantity>
			<comment>No key file necessary for sync; auth via user/pw</comment>
		</filetype>
	</references>

	<outputs>
		<filetype>
			<identifier>ad_acta</identifier>
			<format>any</format>
			<quantity>single</quantity>
			<comment>Successful upload checked manually, log files discarded</comment>
		</filetype>
	</outputs>

	<software>
		<tool>
			<name>ascp</name>
			<version>3.1.0.64761</version>
			<command_line>
				<![CDATA[
					ascp -Q -L ${LOGFOLDER} -T -k1 -v -P 33001 -l800m ${UPLOADFILE}
					${USERNAME}@dkfzaspera.dkfz-heidelberg.de:/upload
				]]>
 			</command_line>
			<loop>no looping</loop>
			<comment>
				NB: the upload folder is rw only for the respective user account and the DMG.
				To share data immediately with other groups, it has to be uploaded to /share
			</comment>
		</tool>
	</software>
</process>