From 499ad4d1b79dabe3804e976de32380633c5abebc Mon Sep 17 00:00:00 2001
From: Peter Ebert <pebert@mpi-inf.mpg.de>
Date: Fri, 30 Dec 2016 17:23:39 +0100
Subject: [PATCH] DOC: added more documentation to the template concerning the
 <loop> tag

---
 template/deep_process_template.xml | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/template/deep_process_template.xml b/template/deep_process_template.xml
index 4c052a6..ae2b6f6 100644
--- a/template/deep_process_template.xml
+++ b/template/deep_process_template.xml
@@ -60,9 +60,12 @@
 			<version>Tool_Version</version>
 			<command_line>
 				<![CDATA[
-					TOOL_CMDLINE
+					CMDLINE
 				]]>
 			</command_line>
+			<!-- looping: can the above command line be executed in parallel, e.g., for each
+			 chromosome separately? If so, please specify the corresponding identifier
+			 from the command line here -->
             <loop>no_looping</loop>
 			<comment>Comment_4</comment>
 		</tool>