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MAINT: changed names to be in line with folders
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pebert committed Dec 29, 2016
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Showing 1 changed file with 5 additions and 5 deletions.
10 changes: 5 additions & 5 deletions docs/README.md
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Assay | Alignment | Quantification | Comment
-----|:---------:|:------------:|-------
ChIP-seq | genome-aln | chip-seq | 6 histone modifications plus input control
DNaseI-seq | genome-aln | dnase-seq | DNaseI hypersensitivity
NOMe-seq | bisulfite-aln | xxx | Nucleosome occupancy and DNA methylation
ChIP-seq | genome | chip-seq | 6 histone modifications plus input control
DNaseI-seq | genome | dnase-seq | DNaseI hypersensitivity
NOMe-seq | bisulfite | xxx | Nucleosome occupancy and DNA methylation
(m)RNA-seq | xxx | xxx | polyA-enriched total RNA-seq (stranded)
(sn)RNA-seq | xxx | xxx | micro RNA
(t)RNA-seq | xxx | xxx | ribo-depleted total RNA-seq (stranded)
RRBS | bisulfite-aln | xxx | Reduced representation bisulfite sequencing
WGBS | bisulfite-aln | xxx | Whole-genome bisulfite sequencing
RRBS | bisulfite | xxx | Reduced representation bisulfite sequencing
WGBS | bisulfite | xxx | Whole-genome bisulfite sequencing

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