diff --git a/CellsortApplyFilter.m b/CellsortApplyFilter.m
index 13663d1..825db2c 100644
--- a/CellsortApplyFilter.m
+++ b/CellsortApplyFilter.m
@@ -44,7 +44,7 @@
 
 fprintf('Loading %5g frames for %d ROIs.\n', nt, size(ica_segments,1))
 tic
-while k<nt
+while k<nt %1:numberOfFrames
     ntcurr = min(500, nt-k);
     mov = zeros(pixw, pixh, ntcurr);
     for j=1:ntcurr
@@ -52,7 +52,7 @@
         mov(:,:,j) = movcurr;
     end
     mov = (mov ./ repmat(movm, [1,1,ntcurr])) - 1; % Normalize by background and subtract mean
-
+    
     if subtractmean
         % Subtract the mean of each frame
         movtm = mean(mean(mov,1),2);
diff --git a/alternativePlot.asv b/alternativePlot.asv
deleted file mode 100644
index 7afd4a2..0000000
--- a/alternativePlot.asv
+++ /dev/null
@@ -1,94 +0,0 @@
-function cell_sig_merged = alternativePlot(ica_segments, cluster, cell_sig, subPlotCols, sortedIdx, data_r)
-cm = colormap(hsv);
-tempImage = zeros(size(ica_segments, 2), size(ica_segments, 3), 3);
-
-for i = 1:subPlotCols
-    rgb = cm(round(64/subPlotCols * (i-1)+1),:);
-    for k = cluster{i}
-        for rgbIdx = 1:3
-            mask = squeeze(ica_segments(sortedIdx(k),:,:));
-            %transform mask to only outlines
-            mask = imfill(mask, 'holes');
-            mask = bwboundaries(mask);
-            mask = mask{:};
-            %create image with drawn lines between points
-            linemask = zeros(size(ica_segments, 2), size(ica_segments, 3));
-            for l = 1:size(mask,1)
-                linemask(mask(l,1),mask(l,2)) = 1;
-            end
-            
-            tempImage(:,:,rgbIdx) = tempImage(:,:,rgbIdx) + rgb(rgbIdx)*linemask;
-        end
-    end
-end
-%set pixels 0 which are smaller than 0, seems to happen in rare cases..
-for i = 1:3
-    tempImage(:,:,i) = (tempImage(:,:,i) > 0).*tempImage(:,:,i);
-end
-%scale tempImage
-% maximum = max(tempImage(:));
-% minimum = min(tempImage(:));
-% tempImage = uint16(65535*(tempImage - minimum)/(maximum-minimum));
-tempImage = uint16(tempImage*65535);
-
-%make background white
-% blackMask = uint16(all((tempImage < 1),3));
-% for i = 1:3
-%     tempImage(:,:,i) = blackMask * 65535 + tempImage(:,:,i);
-% end
-meanImage = mean(data_r,3);
-maximum = max(meanImage(:));
-minimum = min(meanImage(:));
-meanImage = (meanImage - minimum)/(maximum-minimum);
-meanImage = uint16(imadjust(meanImage, [0, 1], [0, 1], 0.4)*65535);
-%copy meanImage in every colorchannel
-for i = 1:3
-    tempImage(:,:,i) = tempImage(:,:,i) + meanImage;
-end
-
-subplot(1,2,1);
-imshow(tempImage);
-%draw number in each roi
-for drawNumberCt = 1:size(cluster{i})
-    number = cluster{i}(drawNumberCt);
-end
-subplot(1,2,2);
-hold on
-cell_sigPlot = cell_sig(sortedIdx,:);
-
-
-
-signal = zeros(size(cluster,2),size(cell_sig,2));
-for i = 1:size(cluster, 2)
-    cell_sig_merged{i} = mean(cell_sig_merged{i}(cluster{i},:), 1);
-    for clusterIdx = cluster{i}
-        %subtract minimum value
-        minimum = min(cell_sigPlot(clusterIdx,:));
-        cell_sigPlot(clusterIdx,:) = cell_sigPlot(clusterIdx,:) - minimum;
-        %norm cell signals
-        integral = median(cell_sigPlot(clusterIdx,:));
-        cell_sigPlot(clusterIdx,:)=cell_sigPlot(clusterIdx,:)/abs(integral);
-    end
-    %mean value of all cluster signals
-    signal(i,:) = mean(cell_sigPlot(cluster{i},:), 1);
-    %add maximum position from signal from before
-    if i ~= 1
-        %maximum = max(signal(i-1,:));
-        maximum = max(max(cell_sigPlot(cluster{i-1},:)));
-    else
-        maximum = 0;
-    end
-    signal(i,:) = signal(i,:) + maximum;
-    rgb = cm(round(64/subPlotCols * (i-1)+1),:);
-    plot(signal(i,:), 'Color', rgb);
-    text(size(signal,2), maximum, num2str(i))
-    %plot single components dotted
-    for clusterIdx = cluster{i}
-        cell_sigPlot(clusterIdx,:) = cell_sigPlot(clusterIdx,:) + maximum;
-        plot(cell_sigPlot(clusterIdx, :),':', 'Color', rgb);
-    end
-end
-xlim([0,size(signal,2)]);
-%maximum = max(cell_sigPlot(:));
-ylim auto;%([0, maximum]);
-end
\ No newline at end of file
diff --git a/alternativePlot.m b/alternativePlot.m
index ebfcf7a..a20388e 100644
--- a/alternativePlot.m
+++ b/alternativePlot.m
@@ -55,7 +55,7 @@
         %get position to draw number in
         mask = squeeze(ica_segments(number,:,:));
         cog = centerofgravity(mask);
-        text(cog(2), cog(1), num2str(i), 'Color', 'white')
+        text(cog(2), cog(1), num2str(i), 'Color', 'white', 'FontSize', 15)
 
     end
 end