From 699be720ac5436c64bcc75893dd1ddb6a473108a Mon Sep 17 00:00:00 2001 From: gajos Date: Fri, 17 Nov 2017 15:56:07 +0100 Subject: [PATCH] Update parameter_dependencies.in --- parameter_dependencies.in | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/parameter_dependencies.in b/parameter_dependencies.in index 60f52b9..5ef819b 100644 --- a/parameter_dependencies.in +++ b/parameter_dependencies.in @@ -1,7 +1,7 @@ # starIndex: provide the full path to the STAR index directory # NetSeqPipeline will: -# 1) create a large index files for the selected reference genome -# 2) if index has been previously created: make sure it is available in the given starIndex location +# 1) create a large index files for the selected reference genome +# 2) if index has been previously created: make sure it is available in the given starIndex location # in a subdirectory with name of the reference # example: for a reference genome e.g. GRCh38, make sure the file is located in /pathToStarIndex/GRCh38/ # IMPORTANT: make sure you have write permission