diff --git a/README.md b/README.md index 5d77737..37faa70 100644 --- a/README.md +++ b/README.md @@ -64,20 +64,20 @@ for more information regarding file formats. `-device [0,1,...]` GPU identifier, starting from 0 for first Graphics Card increasing in whole numbers -`-blockSize [2,3,...]` \t parameter for optimizing runtime. See explicit paragraph beneath +`-blockSize [2,3,...]` parameter for optimizing runtime. See explicit paragraph beneath -`-threads [1,2,...]` \t Number of threads to process results. See explicit paragraph beneath +`-threads [1,2,...]` Number of threads to process results. See explicit paragraph beneath -`-alphaPercent ]0.0;50.0[` \t Significance level for two-sided test. Allowed values: ]0.0;50.0[ +`-alphaPercent ]0.0;50.0[` Significance level for two-sided test. Allowed values: ]0.0;50.0[ ### OPTIONAL -`-pheno [0,1,...]` \t If your phenotype file contains multiple phenotypes, you can use this flag to specify which phenotype should be used. +`-pheno [0,1,...]` If your phenotype file contains multiple phenotypes, you can use this flag to specify which phenotype should be used. If you skip the `-pheno` flag, the first phenotype will be used (equivalent to `-pheno 0`). The second phenotype has index 1, the third index 2 and so forth... -`-testBlockSize 1` \t This will start a test-run with only one sub-matrix to be calculated. +`-testBlockSize 1` This will start a test-run with only one sub-matrix to be calculated. Use this flag to reduce runtime to test for the best possible value for `-blockSize` This will not create ANY results!