{% extends 'base.html' %} {% block title %} {% if tree %} {{ tree.label }} details {% else %} Tree Methods {% endif %} {% endblock %} {% block container %} {% import 'macros/pagination.html' as macro %}
{% if trees %}

Tree Methods

{% if g.debug %}{% endif %} {% for tm in trees %} {% if g.debug %}{% endif %} {% endfor %}
IDName based on
{{ tm.id }}{{ tm.description }} {{ tm.gf_method.method }}
{% elif tree %}

{{ tree.label }}: {{ tree.method.description }}

Tree for gene family {{ tree.family.name }}. View expression as heatmap: raw | row-normalized

{% if tree.phyloxml %}

(The heatmaps are normalized by row. Light yellow cells indicate no/low expression, dark blue cells show the maximum expression. White cells lacking a border are missing values.)


{% else %}
PhyloXML data empty. Cannot draw tree! This indicates trees included in the database haven't been reconciled yet.
{% endif %}

{{ macro.pagination('Sequences', url_for('tree.tree_sequences', tree_id=tree.id), tree.count, url_for('tree.tree_sequences_table', tree_id=tree.id), 'tree' ) }} {{ macro.pagination('Associations', url_for('tree.tree_associations', tree_id=tree.id), association_count, url_for('tree.tree_associations_table', tree_id=tree.id), 'association') }} {% endif %}
{% endblock %} {% block extrajs %} {% if trees %} {% elif tree and tree.phyloxml %} {% endif %} {% endblock %}