{% extends 'base.html' %} {% block title %} {% if form %} Search specific profiles {% else %} Specific profiles results {% endif %} {% endblock %} {% block container %}
{% if form %}

Specific Profiles

Using the form below genes can be found which are expressed specifically under a desired condition.

Search options
{{ form.csrf_token }} {{form.species(class_="form-control")}}
{{form.methods(class_="form-control", disabled=True)}}
{{form.conditions(class_="form-control", disabled=True)}}
{{form.cutoff(class_="form-control", **{'data-provide':"slider", 'data-slider-id':"cutoffSlider", 'data-slider-min':"0.5", 'data-slider-max':"1", 'data-slider-step': "0.01", 'data-slider-value': "0.85"})}}
Help
  • Select the species first
  • Next select a method. Note that different methods can include different options or different level of details in conditions
  • Select the desired condition/tissue
  • Set the SPM cutoff (recommended setting: 0.85). Higher values are more specific, lower ones will include genes that are expressed more broadly
  • Click Show genes When updating the slider a number will appear in the button indicating how many genes there will be in the results
{% elif results %}

{{species.name}} profiles specific for {{condition}}
Method: {{method.description}}

{% for r in results %} {% if r.profile.sequence %} {% if r.profile.sequence.aliases %} {% else %} {% endif %} {% if r.profile.sequence.description %} {% else %} {% endif %} {% endif %} {% endfor %}
Gene Aliases Description Condition SPM score Entropy score Tau score Info Action
{{ r.profile.sequence.name }}{{ r.profile.sequence.aliases }}None{{ r.profile.sequence.description }}None{{ r.condition }} {{ r.score|round(2) }} {{ r.entropy|round(2) }} {% if r.tau %}{{ r.tau|round(2) }}{% else %}None{% endif %} {% if r.profile.low_abundance %}{% endif %} view profile
Download table

{% endif %}
{% endblock %} {% block extrajs %} {% if form %} {% elif results %} {% endif %} {% endblock %}