README.md

# TFBSscan

The tool to search for motifs within the whole genome or regions of interest

Installation
-------------
1. Clone the directory
```bash
git clone https://github.molgen.mpg.de/anastasiia/TFBSscan
```
2. Switch to the directory
```bash
cd TFBSscan
```
3. Create the needed environment from the file tfbs.yaml
```bash
conda env create --file tfbs.yaml
```
4. Activate the environment
```bash
source activate tfbs
```
5. You are ready to use the TFBS scan! To learn how to use TFBS scan, just type 
```bash
python tfbsscan.py
```