From 86b5231c3fd61690f83667f591eae161db5bd348 Mon Sep 17 00:00:00 2001
From: "chung@molgen.mpg.de" <chung@mac-0221.molgen.mpg.de>
Date: Wed, 20 Jan 2016 17:39:24 +0100
Subject: [PATCH] what is with the second contig?

---
 src/rmn.cpp | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/rmn.cpp b/src/rmn.cpp
index b5e731e..fdb3625 100644
--- a/src/rmn.cpp
+++ b/src/rmn.cpp
@@ -308,7 +308,7 @@ Rcpp::List estimate(
       std::cout << iter << ": new z\n";
 
       estimateZ(arma::conv_to<std::vector<double> >::from(lnEmPN), lnTPN, z[iContig], empty[iContig], lnL);
-
+      std::cout << iContig << '\t' << z[iContig](arma::span(1, 10)) << std::endl;
     }
     std::cout << iter << ": new likelihood: " << lnL << std::endl;
   }