From 3620e72b2038542d8de36b29cf313528467348f0 Mon Sep 17 00:00:00 2001 From: Donald Buczek Date: Sun, 11 Sep 2022 13:19:51 +0200 Subject: [PATCH] Rename logfiles from .out to .log --- Adapting_new_script_for_computing_cluster.sh | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Adapting_new_script_for_computing_cluster.sh b/Adapting_new_script_for_computing_cluster.sh index fbac5fa..4cc46db 100755 --- a/Adapting_new_script_for_computing_cluster.sh +++ b/Adapting_new_script_for_computing_cluster.sh @@ -49,7 +49,7 @@ submit() { echo "no _2.fastq file for $f1" continue fi - "${MXQSUB[@]}" --stdout "$log_dir/$id.out" "$0" --execute "$id" "$f1" "$f2" + "${MXQSUB[@]}" --stdout "$log_dir/$id.log" "$0" --execute "$id" "$f1" "$f2" done # input files "blabla_R1_001.fastq" , ""blabla_R2_001.fastq" @@ -66,7 +66,7 @@ submit() { echo "no _R2_001.fastq file for $f1" continue fi - "${MXQSUB[@]}" --stdout "$log_dir/$id.out" "$0" --execute "$id" "$f1" "$f2" + "${MXQSUB[@]}" --stdout "$log_dir/$id.log" "$0" --execute "$id" "$f1" "$f2" done }