From d800970d2ba4e8ea7029d00767f6efddb4c24641 Mon Sep 17 00:00:00 2001 From: Donald Buczek Date: Sun, 11 Sep 2022 15:13:30 +0200 Subject: [PATCH] Remove superfluous backslash --- Adapting_new_script_for_computing_cluster.sh | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/Adapting_new_script_for_computing_cluster.sh b/Adapting_new_script_for_computing_cluster.sh index 90ba758..e9e8f78 100755 --- a/Adapting_new_script_for_computing_cluster.sh +++ b/Adapting_new_script_for_computing_cluster.sh @@ -136,7 +136,8 @@ execute() { # note: this is single-threaded but takes long. Put this into separate cluster job? prun python3 bamCoverage -b final_bam/${id}_sorted_blacklisted.bam -o bigwig/$id.bw -bs 10 -e \ --normalizeUsing CPM -ignore chrX chrY \ - --numberOfProcessors $THREADS \ + --numberOfProcessors $THREADS + prun python3 bamCoverage -b dedup/${id}_dedup.bam -o bigwig/${id}_dedup.bw -bs 10 -e \ --normalizeUsing CPM -ignore chrX chrY \ --numberOfProcessors $THREADS \