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Commits on Feb 5, 2020

• Added filtering of peaks not in input fasta

  msbentsen

  committedFeb 5, 2020
  5ccee94

Commits on Jan 28, 2020

• Split conda environments to prevent solving issues

  msbentsen

  committedJan 28, 2020
  b348eb7

Commits on Jan 6, 2020

• Added exception for configfiles depending on snakemake version

  msbentsen

  committedJan 6, 2020
  d789a13

Commits on Sep 9, 2019

• Set limit of 4 conditions for venn plots

  msbentsen

  committedSep 9, 2019
  4a7dde9

Commits on Sep 8, 2019

• Bug reading motif IDs for .meme files

  msbentsen

  committedSep 8, 2019
  8c8c14f

• Fixed error with path to environment files; snakefiles/scripts/environment files are now read relative to the location of Snakefile

  msbentsen

  committedSep 8, 2019
  fb76812

Commits on Sep 6, 2019

• Added check for globbed filenames in snakefile

  msbentsen

  committedSep 6, 2019
  2ff16d9

Commits on Sep 5, 2019

• Merge branch 'master' of https://github.molgen.mpg.de/loosolab/TOBIAS_snakemake

  msbentsen

  committedSep 5, 2019
  a846df2

• Added default parameters to atacorrect/footprinting/bindetect rules

  msbentsen

  committedSep 5, 2019
  3914178

• Update README.md

  msbentsen

  committedSep 5, 2019
  f0fbef6

Commits on Jul 5, 2019

• Update README.md

  msbentsen

  committedJul 5, 2019
  644474a

Commits on Jun 14, 2019

• Added join of venn diagrams to overview

  msbentsen

  committedJun 14, 2019
  d8f499d

Commits on Jun 10, 2019

• Added conda directive for MACS to make use of snakemake --use-conda

  msbentsen

  committedJun 10, 2019
  3d9d964

Commits on Jun 5, 2019

• Added venn diagram to visualization; changed calculation of output motifs to dynamic checkpoint

  msbentsen

  committedJun 5, 2019
  c28d17b

Commits on May 16, 2019

• Added handling of large number of motif input

  msbentsen

  committedMay 16, 2019
  8b59cf4

Commits on May 6, 2019

• Added globbing of input motifs, meaning that multiple motif file/dirs are possible

  msbentsen

  committedMay 6, 2019
  a370185

Commits on Apr 30, 2019

• added lineplot changes

  msbentsen

  committedApr 30, 2019
  3bcbd36

Commits on Apr 3, 2019

• Added workflow figure

  msbentsen

  committedApr 3, 2019
  098ccbb

• Updated readme

  msbentsen

  committedApr 3, 2019
  7e87189

• Changed the format of peak ids to exclude number, but include condition names in the order given in config

  msbentsen

  committedApr 3, 2019
  5d69d44

Commits on Mar 22, 2019

• Moved snakemake from TOBIAS main to separate repository; Added Wilson visualization rules

  msbentsen

  committedMar 22, 2019
  bf02df0