diff --git a/setup.py b/setup.py index 45c0285..1acddf0 100755 --- a/setup.py +++ b/setup.py @@ -4,7 +4,7 @@ long_description = """RNA-binding proteins (RBPs) play a vital role in the post-transcriptional control of RNAs. They are known to recognize RNA molecules by their nucleotide sequence as well as their three-dimensional structure. ssHMM is an RNA motif finder that combines a hidden Markov model (HMM) with Gibbs sampling to learn the joint sequence and structure binding preferences of RBPs from high-throughput RNA-binding experiments, such as CLIP-Seq. The model can be visualized as an intuitive graph illustrating the interplay between RNA sequence and structure.""" setup(name='sshmm', - version='1.0.7', + version='1.0.8', description='A sequence-structure hidden Markov model for the analysis of RNA-binding protein data.', long_description=long_description, url='https://github.molgen.mpg.de/heller/ssHMM', @@ -23,6 +23,6 @@ packages=['sshmm'], package_data={'sshmm': ['img/*.png'],}, zip_safe=False, - install_requires=['numpy', 'graphviz', 'pygraphviz', 'weblogo', 'future', 'logging_exceptions', 'forgi'], + install_requires=['numpy', 'graphviz', 'pygraphviz', 'weblogo', 'future', 'logging_exceptions', 'forgi==1.1'], scripts=['bin/preprocess_dataset', 'bin/train_seqstructhmm', 'bin/batch_seqstructhmm', 'bin/draw_model_graph'], ext_modules = [Extension("cEstimate", ["sshmm/cEstimate.c"])])