From 6de0d863834727182dcfe334f1612d91b7e4c7ee Mon Sep 17 00:00:00 2001
From: Anton Kriese <kriese_a@molgen.mpg.de>
Date: Fri, 3 Jun 2022 14:43:54 +0200
Subject: [PATCH] format

---
 README.md | 10 ++++++----
 1 file changed, 6 insertions(+), 4 deletions(-)

diff --git a/README.md b/README.md
index 8b173c9..4d3e1b8 100644
--- a/README.md
+++ b/README.md
@@ -16,12 +16,14 @@ pipeline. Currently, the following settings can be made:
 ```yaml
 read_cut_padding: # int, padding left and right of the conflict region
 
-region_file: # str (path to a conflict file)
-alternative_haplotype_vcf: # str (path to a vcf file with known SVs, e.g.
-from the HGSVC)
+# path to a conflict file
+region_file: # str
+
+# path to a vcf file with known SVs, e.g. from the HGSVC
+alternative_haplotype_vcf: # str
 
 # path to liftover directory (explained below)
-liftover_root: # default to 'resources/references/liftover'
+liftover_root: # str, defaults to 'resources/references/liftover'
 
 # Settings for the pairwise alignment
 pw_alignment: