From 7840d589f6da0da9a37191019c8d304b6fa72b19 Mon Sep 17 00:00:00 2001 From: Kiweler Date: Mon, 28 Jan 2019 16:00:20 +0100 Subject: [PATCH] installier anweisung --- R/gradient_functions.R | 1 + R/output_functions.R | 1 + README.Rmd | 7 ++++--- vignettes/using_MARMoSET.Rmd | 7 ++++--- 4 files changed, 10 insertions(+), 6 deletions(-) diff --git a/R/gradient_functions.R b/R/gradient_functions.R index c82d07b..7a10ed0 100644 --- a/R/gradient_functions.R +++ b/R/gradient_functions.R @@ -39,6 +39,7 @@ gradient_as_string <- function(flat_json, group_number) return() } + #' Gradient. #' #' @param flat_json A flattened JSON file, created by "prepare_json()". diff --git a/R/output_functions.R b/R/output_functions.R index e648de1..04ed81d 100644 --- a/R/output_functions.R +++ b/R/output_functions.R @@ -43,6 +43,7 @@ save_group_table <- function(groups_vector, output_path, group_number) utils::globalVariables('.') + #' write all groups to files #' #' @param groups_vector A List with a table for each group. diff --git a/README.Rmd b/README.Rmd index e40c0b5..d234fd9 100644 --- a/README.Rmd +++ b/README.Rmd @@ -33,11 +33,12 @@ The raw file format starts with meta data. It consists of more information about ## Installation -You can install MARMoSET from github with: +You can install MARMoSET from github the following way: -```{r} +```{r, message=FALSE} # install.packages("devtools") -# devtools::install_github("loosolab/MARMoSET") + +devtools::install_github("loosolab/MARMoSET", host="github.molgen.mpg.de/api/v3") library(MARMoSET) ``` diff --git a/vignettes/using_MARMoSET.Rmd b/vignettes/using_MARMoSET.Rmd index 74c0bde..cc5dc3c 100644 --- a/vignettes/using_MARMoSET.Rmd +++ b/vignettes/using_MARMoSET.Rmd @@ -37,11 +37,12 @@ The raw file format starts with meta data. It consists of more information about ## Installation -You can install MARMoSET from github with: +You can install MARMoSET from github the following way: -```{r} +```{r, message=FALSE} # install.packages("devtools") -# devtools::install_github("loosolab/MARMoSET") + +devtools::install_github("loosolab/MARMoSET", host="github.molgen.mpg.de/api/v3") library(MARMoSET) ```