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Term matching tables
marinakiweler edited this page Jun 7, 2019
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The term matching table provides the basis to filter the information of the Json file. It includes labels, keywords and links to the information in the json file.
| term_verbose | origin | handle_type | handle | example |
|---|---|---|---|---|
| Mass Spectrometer (MS) | author;miape;jpr_guidelines_ms | list_path | Instruments.Q Exactive Plus - Orbitrap MS.InstrumentFriendName | Q Exactive Plus - Orbitrap MS |
| MS Vendor | author;miape;jpr_guidelines_ms | literal | Thermo Scientific | Thermo Scientific |
| MS Model | author;miape;jpr_guidelines_ms | literal | QExactive Plus | QExactive Plus |
| MS Instrument Software | author;miape | literal | Xcalibur | Xcalibur |
| MS Instrument Software Version | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.SoftwareVersion | 2.4-182401/2.4.0.1824 |
| MS Measurement Polarity | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.FULL MS / DD-MS² (TOPN).Polarity | Positive |
| MS Ionization Type | author;miape | literal | Electrospray Ionization (ESI) | electrospray ionization (ESI) |
| MS Electrospray Voltage | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.SharedTuneData.Spray Voltage (+) | 2300 |
| MS Heated Capillary Temperature | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.SharedTuneData.Capillary Temperature (+ or +-) | 275 |
| MS Analyzer Precursor Ion Spectrum (MS1) | author;miape;jpr_guidelines_ms | literal | orbitrap | orbitrap |
| MS Data Type Precursor Ion Spectrum (MS1) | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.Full MS.Spectrum data type | Profile |
| MS Micro Spectrums Precursor Ion Spectrum (MS1) | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.Full MS.Microscans | 1 |
| MS Resolution Precursor Ion Spectrum (MS1) | author;miape;jpr_guidelines_ms | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.Full MS.Resolution | 70,000 |
| MS Resolution m/z Precursor Ion Spectrum (MS1) | author;miape | literal | 200 m/z | 200 m/z |
| MS Mass Range Precursor Ion Spectrum (MS1) | author;miape;jpr_guidelines_ms | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.Full MS.Scan range | 300 to 1750 m/z |
| MS Ion Target Value Precursor Ion Spectrum (MS1) | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.Full MS.AGC target | 3e6 |
| MS Max. Injection Time Precursor Ion Spectrum (MS1) | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.Full MS.Maximum IT | 20 ms |
| MS Analyzer Fragment Ion Spectrum (MS2) | author;miape;jpr_guidelines_ms | literal | orbitrap | orbitrap |
| MS Data Type Fragment Ion Spectrum (MS2) | author;miape | list_path | Instruments.Q Exactive Plus - Orbitrap MS.Method.dd-MS² / dd-SIM.Spectrum data type | Profile |