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spike_in

Kai Schmid edited this page Mar 25, 2019 · 9 revisions
spike_in(noise = 500, spike = 25, numberpatients = 500, proportion_noise = 0.7, proportion_spike = 0.7, overlap = 0.65, noise_FC = 2, spike_FC = 2, numberspikeins = 1)
argument function default
noise number of bimodal genes in the noise 500
spike number of bimodal genes in the spike 25
numberpatients number of patients in both spike and noise 500
proportion_noise proportion of the bimodality in the noise 0.7
proportion_spike proportion of the bimodality in the spike 0.7
overlap enhanced overlap between the spike genes in % 65
noise_FC distance between the means of the modalities in the noise 2
spike_FC distance between the means of the modalities in the spike 2
numberspikeins number of not connected spikes to be added to the noise 1

spike_graphic

table_out