From 0efd686802de9c97550900c3893d1e66426af856 Mon Sep 17 00:00:00 2001 From: msbentsen Date: Wed, 9 Jan 2019 09:43:56 +0100 Subject: [PATCH] Changed estimation of log2fc in BINDetect from density to GMM; included better finding of best number of components; bug fixes --- test_data/genes_chr4.gtf.sorted | 2510 -------------------- tobias/footprinting/BINDetect.py | 171 +- tobias/footprinting/BINDetect_functions.py | 53 +- tobias/plotting/plot_aggregate.py | 17 +- tobias/plotting/plot_heatmap.py | 62 +- tobias/utils/utilities.py | 2 +- 6 files changed, 197 insertions(+), 2618 deletions(-) delete mode 100644 test_data/genes_chr4.gtf.sorted diff --git a/test_data/genes_chr4.gtf.sorted b/test_data/genes_chr4.gtf.sorted deleted file mode 100644 index 3e06d93..0000000 --- a/test_data/genes_chr4.gtf.sorted +++ /dev/null @@ -1,2510 +0,0 @@ -chr4 havana gene 49096 50124 . - . gene_id "ENSG00000248302"; gene_version "3"; gene_name "BNIP3P41"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 53285 88211 . + . gene_id "ENSG00000272602"; gene_version "5"; gene_name "ZNF595"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 105959 107114 . - . gene_id "ENSG00000250238"; gene_version "1"; gene_name "AC253576.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 124480 202303 . + . gene_id "ENSG00000250312"; gene_version "7"; gene_name "ZNF718"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 149738 150317 . + . gene_id "ENSG00000275426"; gene_version "1"; gene_name "AC253576.2"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 201409 205009 . - . gene_id "ENSG00000250892"; gene_version "1"; gene_name "AC108475.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 212610 255985 . + . gene_id "ENSG00000198155"; gene_version "5"; gene_name "ZNF876P"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 268982 269531 . - . gene_id "ENSG00000251188"; gene_version "1"; gene_name "AC079140.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 269866 270175 . - . gene_id "ENSG00000251689"; gene_version "1"; gene_name "AC079140.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 270675 305321 . - . gene_id "ENSG00000186777"; gene_version "11"; gene_name "ZNF732"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 336258 336786 . - . gene_id "ENSG00000251535"; gene_version "1"; gene_name "AC079140.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 337814 384864 . + . gene_id "ENSG00000131127"; gene_version "13"; gene_name "ZNF141"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 338097 338583 . - . gene_id "ENSG00000248564"; gene_version "1"; gene_name "AC079140.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 342821 342962 . - . gene_id "ENSG00000250321"; gene_version "1"; gene_name "AC079140.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 350157 350252 . + . gene_id "ENSG00000207642"; gene_version "1"; gene_name "MIR571"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 386174 454070 . + . gene_id "ENSG00000281016"; gene_version "1"; gene_name "AC092574.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 393534 393658 . + . gene_id "ENSG00000249025"; gene_version "1"; gene_name "ZNF519P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 416118 416537 . - . gene_id "ENSG00000272885"; gene_version "1"; gene_name "AC092574.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 425435 474129 . - . gene_id "ENSG00000251595"; gene_version "7"; gene_name "ABCA11P"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 425815 499156 . - . gene_id "ENSG00000182903"; gene_version "15"; gene_name "ZNF721"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 499210 540196 . + . gene_id "ENSG00000174227"; gene_version "15"; gene_name "PIGG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 573880 576300 . - . gene_id "ENSG00000273238"; gene_version "2"; gene_name "TMEM271"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 577168 584866 . + . gene_id "ENSG00000283183"; gene_version "1"; gene_name "AC116565.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 625584 670782 . + . gene_id "ENSG00000133256"; gene_version "12"; gene_name "PDE6B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 652850 656213 . - . gene_id "ENSG00000242686"; gene_version "4"; gene_name "AC107464.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 661209 661945 . - . gene_id "ENSG00000272927"; gene_version "1"; gene_name "AC107464.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 672436 674338 . - . gene_id "ENSG00000169020"; gene_version "9"; gene_name "ATP5ME"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 673580 682033 . + . gene_id "ENSG00000215375"; gene_version "6"; gene_name "MYL5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 681829 689441 . - . gene_id "ENSG00000169026"; gene_version "12"; gene_name "SLC49A3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 705748 770640 . + . gene_id "ENSG00000185619"; gene_version "18"; gene_name "PCGF3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 722275 724034 . - . gene_id "ENSG00000248416"; gene_version "1"; gene_name "AC107464.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 757022 757740 . - . gene_id "ENSG00000272588"; gene_version "1"; gene_name "AC139887.4"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 762387 781849 . - . gene_id "ENSG00000249592"; gene_version "5"; gene_name "AC139887.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 764487 765074 . - . gene_id "ENSG00000233799"; gene_version "1"; gene_name "AC139887.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 784957 826198 . - . gene_id "ENSG00000168993"; gene_version "14"; gene_name "CPLX1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 836512 837224 . - . gene_id "ENSG00000260262"; gene_version "1"; gene_name "AC139887.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 849276 932373 . - . gene_id "ENSG00000178950"; gene_version "16"; gene_name "GAK"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 932387 958656 . + . gene_id "ENSG00000127419"; gene_version "16"; gene_name "TMEM175"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 958887 986895 . - . gene_id "ENSG00000145214"; gene_version "13"; gene_name "DGKQ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 979073 993440 . - . gene_id "ENSG00000145217"; gene_version "13"; gene_name "SLC26A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 986997 1004506 . + . gene_id "ENSG00000127415"; gene_version "12"; gene_name "IDUA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1009936 1026897 . + . gene_id "ENSG00000127418"; gene_version "14"; gene_name "FGFRL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 1027678 1028972 . + . gene_id "ENSG00000250259"; gene_version "1"; gene_name "AC019103.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 1056250 1113562 . - . gene_id "ENSG00000178222"; gene_version "12"; gene_name "RNF212"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 1100016 1101558 . - . gene_id "ENSG00000251639"; gene_version "2"; gene_name "AC092535.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 1113639 1132977 . + . gene_id "ENSG00000251652"; gene_version "1"; gene_name "AC092535.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 1115197 1153726 . - . gene_id "ENSG00000215367"; gene_version "10"; gene_name "TMED11P"; gene_source "havana"; gene_biotype "transcribed_unitary_pseudogene"; -chr4 ensembl gene 1118884 1119013 . + . gene_id "ENSG00000212458"; gene_version "1"; gene_name "RF00554"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 1151372 1153701 . + . gene_id "ENSG00000227189"; gene_version "2"; gene_name "AC092535.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 1166932 1208962 . - . gene_id "ENSG00000159674"; gene_version "11"; gene_name "SPON2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 1167778 1168174 . + . gene_id "ENSG00000273179"; gene_version "1"; gene_name "AC092535.4"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 1210120 1218591 . + . gene_id "ENSG00000280927"; gene_version "1"; gene_name "CTBP1-AS"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 1211448 1249953 . - . gene_id "ENSG00000159692"; gene_version "15"; gene_name "CTBP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1249300 1288291 . + . gene_id "ENSG00000196810"; gene_version "4"; gene_name "CTBP1-DT"; gene_source "ensembl_havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 1289851 1340147 . + . gene_id "ENSG00000090316"; gene_version "15"; gene_name "MAEA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1347266 1395992 . + . gene_id "ENSG00000163945"; gene_version "16"; gene_name "UVSSA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 1356581 1358075 . + . gene_id "ENSG00000254094"; gene_version "1"; gene_name "AC078852.2"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 1358479 1359461 . + . gene_id "ENSG00000253399"; gene_version "1"; gene_name "AC078852.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 ensembl_havana gene 1402932 1406331 . - . gene_id "ENSG00000235608"; gene_version "1"; gene_name "NKX1-1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 1550284 1550572 . + . gene_id "ENSG00000272783"; gene_version "1"; gene_name "AC147067.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 1574062 1580253 . - . gene_id "ENSG00000244459"; gene_version "2"; gene_name "AC147067.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 1617915 1684302 . - . gene_id "ENSG00000174137"; gene_version "12"; gene_name "FAM53A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 1683420 1683529 . - . gene_id "ENSG00000207009"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 1692800 1712555 . - . gene_id "ENSG00000163950"; gene_version "12"; gene_name "SLBP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 1712821 1713622 . + . gene_id "ENSG00000270195"; gene_version "1"; gene_name "AC016773.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 1715952 1721358 . - . gene_id "ENSG00000168936"; gene_version "10"; gene_name "TMEM129"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1721490 1745176 . + . gene_id "ENSG00000013810"; gene_version "18"; gene_name "TACC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1793293 1808872 . + . gene_id "ENSG00000068078"; gene_version "18"; gene_name "FGFR3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1811479 1856247 . - . gene_id "ENSG00000168924"; gene_version "14"; gene_name "LETM1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 1871424 1982207 . + . gene_id "ENSG00000109685"; gene_version "17"; gene_name "NSD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 1974636 1974760 . + . gene_id "ENSG00000249784"; gene_version "1"; gene_name "SCARNA22"; gene_source "ensembl"; gene_biotype "scaRNA"; -chr4 ensembl_havana gene 1982714 2041903 . - . gene_id "ENSG00000185049"; gene_version "14"; gene_name "NELFA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 1986384 1986477 . - . gene_id "ENSG00000284587"; gene_version "1"; gene_name "MIR943"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 2041993 2043970 . + . gene_id "ENSG00000243449"; gene_version "6"; gene_name "C4orf48"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2059512 2069089 . + . gene_id "ENSG00000185818"; gene_version "7"; gene_name "NAT8L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2071918 2242121 . - . gene_id "ENSG00000130997"; gene_version "16"; gene_name "POLN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 2088718 2090617 . - . gene_id "ENSG00000249006"; gene_version "1"; gene_name "AL136360.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 2139673 2141058 . + . gene_id "ENSG00000250623"; gene_version "1"; gene_name "AL136360.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 2227464 2242164 . - . gene_id "ENSG00000214367"; gene_version "7"; gene_name "HAUS3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 2234251 2234499 . + . gene_id "ENSG00000249047"; gene_version "2"; gene_name "COX6B1P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 2247432 2262294 . - . gene_id "ENSG00000123933"; gene_version "16"; gene_name "MXD4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 2250077 2250156 . - . gene_id "ENSG00000284276"; gene_version "1"; gene_name "MIR4800"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 2269582 2418663 . - . gene_id "ENSG00000159733"; gene_version "13"; gene_name "ZFYVE28"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 2295584 2319089 . + . gene_id "ENSG00000251148"; gene_version "1"; gene_name "AL158068.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 2316197 2316506 . - . gene_id "ENSG00000239247"; gene_version "3"; gene_name "RN7SL589P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 2324467 2325082 . + . gene_id "ENSG00000249077"; gene_version "1"; gene_name "AL158068.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 2418974 2462942 . + . gene_id "ENSG00000206113"; gene_version "10"; gene_name "CFAP99"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2462220 2625320 . + . gene_id "ENSG00000063978"; gene_version "15"; gene_name "RNF4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 2463797 2464124 . + . gene_id "ENSG00000248399"; gene_version "1"; gene_name "AL645924.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 2505081 2506279 . - . gene_id "ENSG00000251229"; gene_version "1"; gene_name "AL645924.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 2536631 2732565 . + . gene_id "ENSG00000125386"; gene_version "15"; gene_name "FAM193A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 2607870 2608146 . - . gene_id "ENSG00000248155"; gene_version "1"; gene_name "CR545473.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl gene 2615124 2615224 . - . gene_id "ENSG00000206738"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 2741648 2756376 . - . gene_id "ENSG00000168884"; gene_version "14"; gene_name "TNIP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2793023 2841098 . + . gene_id "ENSG00000087266"; gene_version "15"; gene_name "SH3BP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2843857 2930076 . + . gene_id "ENSG00000087274"; gene_version "16"; gene_name "ADD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2930561 2934859 . - . gene_id "ENSG00000109736"; gene_version "14"; gene_name "MFSD10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 2934899 2961738 . + . gene_id "ENSG00000249673"; gene_version "6"; gene_name "NOP14-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 2937933 2963385 . - . gene_id "ENSG00000087269"; gene_version "15"; gene_name "NOP14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 2963608 3040747 . + . gene_id "ENSG00000125388"; gene_version "19"; gene_name "GRK4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 3041422 3243960 . + . gene_id "ENSG00000197386"; gene_version "12"; gene_name "HTT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 3044101 3044207 . + . gene_id "ENSG00000199335"; gene_version "1"; gene_name "RNU6-204P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 3063471 3074514 . - . gene_id "ENSG00000251075"; gene_version "1"; gene_name "HTT-AS"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 3063472 3063701 . + . gene_id "ENSG00000278778"; gene_version "1"; gene_name "RF02134"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 3069977 3070151 . + . gene_id "ENSG00000274693"; gene_version "1"; gene_name "RF02135"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 3244369 3271738 . + . gene_id "ENSG00000188981"; gene_version "10"; gene_name "MSANTD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 3293028 3439913 . + . gene_id "ENSG00000159788"; gene_version "19"; gene_name "RGS12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 3312512 3313058 . + . gene_id "ENSG00000248840"; gene_version "2"; gene_name "AL645949.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 3323977 3324762 . - . gene_id "ENSG00000248843"; gene_version "1"; gene_name "AL645949.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 3441887 3449495 . + . gene_id "ENSG00000109758"; gene_version "8"; gene_name "HGFAC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 3463311 3501473 . + . gene_id "ENSG00000175920"; gene_version "17"; gene_name "DOK7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 3503597 3532559 . - . gene_id "ENSG00000163956"; gene_version "11"; gene_name "LRPAP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 3544555 3548796 . + . gene_id "ENSG00000270090"; gene_version "5"; gene_name "AL590235.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 3576869 3590711 . + . gene_id "ENSG00000216560"; gene_version "4"; gene_name "LINC00955"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 3633029 3633975 . + . gene_id "ENSG00000250681"; gene_version "1"; gene_name "AL121796.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 3673593 3677855 . - . gene_id "ENSG00000250632"; gene_version "1"; gene_name "LINC02171"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 3758748 3763390 . - . gene_id "ENSG00000250986"; gene_version "1"; gene_name "LINC02600"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 3766348 3768526 . + . gene_id "ENSG00000184160"; gene_version "7"; gene_name "ADRA2C"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 3889356 3890249 . - . gene_id "ENSG00000251166"; gene_version "1"; gene_name "OR7E163P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 3901566 3902594 . - . gene_id "ENSG00000234386"; gene_version "4"; gene_name "OR7E162P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 3910283 3910604 . + . gene_id "ENSG00000249522"; gene_version "1"; gene_name "AC147876.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 3915183 3955419 . - . gene_id "ENSG00000253917"; gene_version "4"; gene_name "AC226119.1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 3915187 3924274 . - . gene_id "ENSG00000271977"; gene_version "1"; gene_name "AC226119.2"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 3935447 3942519 . + . gene_id "ENSG00000251271"; gene_version "3"; gene_name "ALG1L7P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 3941760 3955419 . - . gene_id "ENSG00000251669"; gene_version "5"; gene_name "FAM86EP"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 3967034 3967660 . - . gene_id "ENSG00000250476"; gene_version "1"; gene_name "ENPP7P9"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 4048211 4107583 . - . gene_id "ENSG00000284727"; gene_version "1"; gene_name "AC116562.4"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 4076711 4077491 . - . gene_id "ENSG00000243894"; gene_version "1"; gene_name "AC116562.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 4086638 4086814 . + . gene_id "ENSG00000250940"; gene_version "1"; gene_name "AC116562.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 4117925 4118284 . - . gene_id "ENSG00000248669"; gene_version "1"; gene_name "AC116562.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 4126659 4127569 . - . gene_id "ENSG00000198787"; gene_version "5"; gene_name "OR4D12P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 4143458 4150421 . - . gene_id "ENSG00000250381"; gene_version "1"; gene_name "UNC93B4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 4156522 4157443 . - . gene_id "ENSG00000250710"; gene_version "3"; gene_name "OR7E99P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 4174319 4175238 . - . gene_id "ENSG00000249844"; gene_version "1"; gene_name "OR7E43P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 4188803 4226889 . - . gene_id "ENSG00000163982"; gene_version "5"; gene_name "OTOP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 4235542 4248212 . - . gene_id "ENSG00000132406"; gene_version "11"; gene_name "TMEM128"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 4267701 4290169 . - . gene_id "ENSG00000145220"; gene_version "13"; gene_name "LYAR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 4290251 4321786 . + . gene_id "ENSG00000168826"; gene_version "15"; gene_name "ZBTB49"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 4321962 4334182 . + . gene_id "ENSG00000248516"; gene_version "1"; gene_name "AC105415.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 4348140 4419058 . + . gene_id "ENSG00000168824"; gene_version "14"; gene_name "NSG1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 4415742 4542346 . - . gene_id "ENSG00000168818"; gene_version "9"; gene_name "STX18"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 4476121 4481700 . - . gene_id "ENSG00000248221"; gene_version "1"; gene_name "STX18-IT1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 4507078 4507777 . + . gene_id "ENSG00000237170"; gene_version "3"; gene_name "RPS7P15"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 4542131 4710938 . + . gene_id "ENSG00000247708"; gene_version "7"; gene_name "STX18-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 4820405 4821452 . + . gene_id "ENSG00000280310"; gene_version "1"; gene_name "AC092437.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 4844437 4850827 . + . gene_id "ENSG00000273396"; gene_version "1"; gene_name "LINC01396"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 4859666 4863936 . + . gene_id "ENSG00000163132"; gene_version "6"; gene_name "MSX1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 4894182 4895173 . - . gene_id "ENSG00000251587"; gene_version "1"; gene_name "LDHAP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 4920770 4921064 . - . gene_id "ENSG00000200761"; gene_version "1"; gene_name "RN7SKP113"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 5014586 5019472 . - . gene_id "ENSG00000170891"; gene_version "10"; gene_name "CYTL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 5051442 5500998 . + . gene_id "ENSG00000152953"; gene_version "12"; gene_name "STK32B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 5426885 5426984 . - . gene_id "ENSG00000252266"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 5458581 5458881 . - . gene_id "ENSG00000201496"; gene_version "1"; gene_name "RN7SKP275"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 5524569 5527801 . + . gene_id "ENSG00000082929"; gene_version "8"; gene_name "LINC01587"; gene_source "ensembl_havana"; gene_biotype "processed_transcript"; -chr4 ensembl_havana gene 5542772 5709548 . - . gene_id "ENSG00000173040"; gene_version "12"; gene_name "EVC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 5711197 5814305 . + . gene_id "ENSG00000072840"; gene_version "12"; gene_name "EVC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 5748084 5893058 . - . gene_id "ENSG00000072832"; gene_version "14"; gene_name "CRMP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 5897373 6200555 . - . gene_id "ENSG00000181215"; gene_version "15"; gene_name "C4orf50"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 5923275 5923328 . - . gene_id "ENSG00000263631"; gene_version "1"; gene_name "MIR378D1"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 6026203 6200591 . - . gene_id "ENSG00000152969"; gene_version "19"; gene_name "JAKMIP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 6064977 6070162 . - . gene_id "ENSG00000284684"; gene_version "1"; gene_name "AC092442.1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 6200733 6239937 . + . gene_id "ENSG00000249896"; gene_version "2"; gene_name "LINC02495"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 6202328 6206649 . + . gene_id "ENSG00000251408"; gene_version "1"; gene_name "AC113615.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 6269849 6303265 . + . gene_id "ENSG00000109501"; gene_version "13"; gene_name "WFS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 6320578 6563600 . - . gene_id "ENSG00000074211"; gene_version "13"; gene_name "PPP2R2C"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 6575175 6623362 . + . gene_id "ENSG00000013288"; gene_version "8"; gene_name "MAN2B2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 6640091 6642745 . + . gene_id "ENSG00000179010"; gene_version "14"; gene_name "MRFAP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 6648696 6673896 . - . gene_id "ENSG00000251580"; gene_version "2"; gene_name "LINC02482"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 6658690 6658981 . + . gene_id "ENSG00000284847"; gene_version "1"; gene_name "AC093323.4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 6663396 6676755 . + . gene_id "ENSG00000170846"; gene_version "17"; gene_name "AC093323.1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 6687448 6690519 . - . gene_id "ENSG00000246526"; gene_version "2"; gene_name "LINC002481"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 6691995 6692970 . - . gene_id "ENSG00000279859"; gene_version "2"; gene_name "AC093323.2"; gene_source "ensembl_havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 6693069 6697170 . + . gene_id "ENSG00000163993"; gene_version "6"; gene_name "S100P"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 6697861 6698809 . - . gene_id "ENSG00000282742"; gene_version "1"; gene_name "AC093323.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 6707701 6709880 . - . gene_id "ENSG00000178988"; gene_version "10"; gene_name "MRFAP1L1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 6716055 6717671 . + . gene_id "ENSG00000186222"; gene_version "4"; gene_name "BLOC1S4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 6781375 6884170 . + . gene_id "ENSG00000170871"; gene_version "11"; gene_name "KIAA0232"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 6909242 7033118 . + . gene_id "ENSG00000132405"; gene_version "18"; gene_name "TBC1D14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 6995341 6998958 . + . gene_id "ENSG00000187904"; gene_version "3"; gene_name "AC097382.1"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 ensembl gene 6997012 6997328 . + . gene_id "ENSG00000202392"; gene_version "1"; gene_name "RN7SKP292"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 7030554 7046231 . - . gene_id "ENSG00000245748"; gene_version "1"; gene_name "AC097382.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 7040849 7042939 . - . gene_id "ENSG00000173013"; gene_version "5"; gene_name "CCDC96"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 7041899 7057952 . + . gene_id "ENSG00000173011"; gene_version "11"; gene_name "TADA2B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 7058906 7068197 . - . gene_id "ENSG00000109519"; gene_version "12"; gene_name "GRPEL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 7094571 7103385 . - . gene_id "ENSG00000245468"; gene_version "3"; gene_name "LINC02447"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 7112088 7112399 . - . gene_id "ENSG00000200867"; gene_version "1"; gene_name "RN7SKP36"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 7192538 7742836 . + . gene_id "ENSG00000184985"; gene_version "16"; gene_name "SORCS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 7310450 7310524 . + . gene_id "ENSG00000264658"; gene_version "1"; gene_name "MIR4798"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 7430294 7434973 . - . gene_id "ENSG00000178597"; gene_version "6"; gene_name "PSAPL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 7460028 7460118 . + . gene_id "ENSG00000266690"; gene_version "1"; gene_name "MIR4274"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 7754090 7778928 . + . gene_id "ENSG00000272620"; gene_version "1"; gene_name "AFAP1-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 7758714 7939926 . - . gene_id "ENSG00000196526"; gene_version "10"; gene_name "AFAP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 7939001 7940296 . + . gene_id "ENSG00000228919"; gene_version "5"; gene_name "AC097381.1"; gene_source "ensembl_havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 7965310 8158832 . - . gene_id "ENSG00000163995"; gene_version "19"; gene_name "ABLIM2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 8005301 8005381 . - . gene_id "ENSG00000207807"; gene_version "1"; gene_name "MIR95"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 8022665 8023126 . + . gene_id "ENSG00000273267"; gene_version "1"; gene_name "AC097381.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 8066528 8067724 . + . gene_id "ENSG00000251460"; gene_version "1"; gene_name "AC097381.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 8174421 8174999 . + . gene_id "ENSG00000250471"; gene_version "2"; gene_name "GMPSP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 8182072 8241803 . + . gene_id "ENSG00000125089"; gene_version "16"; gene_name "SH3TC1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 8269765 8307111 . + . gene_id "ENSG00000170801"; gene_version "9"; gene_name "HTRA3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 8320117 8327142 . + . gene_id "ENSG00000249145"; gene_version "2"; gene_name "LINC02517"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 8355090 8358338 . - . gene_id "ENSG00000251615"; gene_version "3"; gene_name "AC104825.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 8366282 8440723 . - . gene_id "ENSG00000087008"; gene_version "15"; gene_name "ACOX3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 8393015 8393124 . + . gene_id "ENSG00000202054"; gene_version "1"; gene_name "RNA5SP152"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl_havana gene 8436140 8493531 . + . gene_id "ENSG00000155275"; gene_version "18"; gene_name "TRMT44"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 8453410 8454942 . - . gene_id "ENSG00000251186"; gene_version "1"; gene_name "AC105345.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 8482270 8512610 . + . gene_id "ENSG00000205959"; gene_version "3"; gene_name "AC105345.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 8558725 8619761 . + . gene_id "ENSG00000155269"; gene_version "11"; gene_name "GPR78"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 8592660 8619759 . + . gene_id "ENSG00000109625"; gene_version "18"; gene_name "CPZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 8745397 8746033 . - . gene_id "ENSG00000250915"; gene_version "1"; gene_name "AC209005.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 8846076 8871817 . - . gene_id "ENSG00000215612"; gene_version "7"; gene_name "HMX1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 8858715 8860827 . - . gene_id "ENSG00000258507"; gene_version "1"; gene_name "AC116612.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 8949630 8950559 . + . gene_id "ENSG00000197468"; gene_version "5"; gene_name "AC073648.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 8959628 8963981 . + . gene_id "ENSG00000249272"; gene_version "1"; gene_name "UNC93B8"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 8981436 8982360 . + . gene_id "ENSG00000250804"; gene_version "1"; gene_name "AC073648.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 8990455 8990806 . + . gene_id "ENSG00000249347"; gene_version "1"; gene_name "AC073648.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9000841 9001058 . + . gene_id "ENSG00000284636"; gene_version "1"; gene_name "AC073648.6"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9020857 9021161 . - . gene_id "ENSG00000271057"; gene_version "1"; gene_name "AC073648.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9030286 9031066 . + . gene_id "ENSG00000251313"; gene_version "1"; gene_name "AC073648.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9051842 9052051 . - . gene_id "ENSG00000250342"; gene_version "1"; gene_name "SNRPCP16"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9079023 9141608 . + . gene_id "ENSG00000249767"; gene_version "1"; gene_name "ENPP7P10"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9153296 9165451 . + . gene_id "ENSG00000163612"; gene_version "10"; gene_name "FAM86KP"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9166297 9170270 . - . gene_id "ENSG00000250268"; gene_version "3"; gene_name "ALG1L14P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9170409 9176730 . + . gene_id "ENSG00000229924"; gene_version "3"; gene_name "FAM90A26"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9210657 9212608 . + . gene_id "ENSG00000231396"; gene_version "2"; gene_name "USP17L10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9215405 9217356 . + . gene_id "ENSG00000233136"; gene_version "2"; gene_name "USP17L11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9220152 9221744 . + . gene_id "ENSG00000227551"; gene_version "1"; gene_name "USP17L12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9224896 9226847 . + . gene_id "ENSG00000232399"; gene_version "3"; gene_name "USP17L13"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 9229641 9231233 . + . gene_id "ENSG00000249482"; gene_version "1"; gene_name "USP17L14P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 9234385 9236334 . + . gene_id "ENSG00000223569"; gene_version "6"; gene_name "USP17L15"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 9239130 9240722 . + . gene_id "ENSG00000250231"; gene_version "1"; gene_name "USP17L16P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 9243879 9245830 . + . gene_id "ENSG00000249104"; gene_version "2"; gene_name "USP17L17"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9248630 9250581 . + . gene_id "ENSG00000250844"; gene_version "2"; gene_name "USP17L18"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9253378 9255329 . + . gene_id "ENSG00000248920"; gene_version "2"; gene_name "USP17L19"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9258124 9260075 . + . gene_id "ENSG00000250745"; gene_version "2"; gene_name "USP17L20"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9262872 9264823 . + . gene_id "ENSG00000249811"; gene_version "2"; gene_name "USP17L21"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9267619 9269570 . + . gene_id "ENSG00000248933"; gene_version "2"; gene_name "USP17L22"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 9272364 9272914 . + . gene_id "ENSG00000250913"; gene_version "2"; gene_name "USP17L23"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9325165 9327116 . + . gene_id "ENSG00000232264"; gene_version "4"; gene_name "USP17L24"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9329911 9331862 . + . gene_id "ENSG00000230430"; gene_version "4"; gene_name "USP17L25"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9334658 9336609 . + . gene_id "ENSG00000229579"; gene_version "4"; gene_name "USP17L26"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 9339403 9340995 . + . gene_id "ENSG00000227140"; gene_version "3"; gene_name "USP17L5"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 9344148 9345740 . + . gene_id "ENSG00000235780"; gene_version "3"; gene_name "USP17L27"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 9348893 9350485 . + . gene_id "ENSG00000231051"; gene_version "3"; gene_name "USP17L28"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 9353638 9355230 . + . gene_id "ENSG00000231637"; gene_version "3"; gene_name "USP17L29"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 9358383 9359975 . + . gene_id "ENSG00000251694"; gene_version "1"; gene_name "USP17L9P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9363129 9364721 . + . gene_id "ENSG00000228856"; gene_version "3"; gene_name "USP17L30"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9367874 9369070 . + . gene_id "ENSG00000205946"; gene_version "1"; gene_name "USP17L6P"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9384017 9388983 . - . gene_id "ENSG00000219492"; gene_version "4"; gene_name "AC116655.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 9399204 9403565 . + . gene_id "ENSG00000188438"; gene_version "4"; gene_name "DEFB108F"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl gene 9411178 9411253 . - . gene_id "ENSG00000252307"; gene_version "1"; gene_name "RNA5SP153"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl_havana gene 9422313 9429702 . + . gene_id "ENSG00000232773"; gene_version "2"; gene_name "DEFB130D"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 9444534 9450514 . + . gene_id "ENSG00000186146"; gene_version "1"; gene_name "DEFB131A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 9459255 9460244 . + . gene_id "ENSG00000248364"; gene_version "1"; gene_name "OR7E86P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9468974 9469983 . + . gene_id "ENSG00000284689"; gene_version "1"; gene_name "OR7E84P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9483718 9484702 . + . gene_id "ENSG00000250884"; gene_version "1"; gene_name "OR7E85P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9493736 9498066 . + . gene_id "ENSG00000251624"; gene_version "1"; gene_name "UNC93B7"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9512905 9513874 . + . gene_id "ENSG00000249866"; gene_version "1"; gene_name "OR7E83P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9521910 9522276 . + . gene_id "ENSG00000249443"; gene_version "1"; gene_name "AC097493.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9532429 9532647 . + . gene_id "ENSG00000284648"; gene_version "1"; gene_name "AC097493.4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9553614 9553985 . - . gene_id "ENSG00000242034"; gene_version "1"; gene_name "AC097493.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 9556168 9556316 . - . gene_id "ENSG00000221275"; gene_version "1"; gene_name "MIR548I2"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 9563171 9563950 . + . gene_id "ENSG00000244004"; gene_version "1"; gene_name "AC097493.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9583942 9584131 . - . gene_id "ENSG00000249799"; gene_version "1"; gene_name "SNRPCP13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9677308 9677934 . + . gene_id "ENSG00000250942"; gene_version "1"; gene_name "ENPP7P11"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 9692495 9702954 . + . gene_id "ENSG00000186234"; gene_version "7"; gene_name "FAM86MP"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9703754 9710812 . - . gene_id "ENSG00000251087"; gene_version "3"; gene_name "ALG1L3P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl gene 9711953 9712233 . - . gene_id "ENSG00000203436"; gene_version "2"; gene_name "RF00017"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 9733370 9742361 . + . gene_id "ENSG00000249563"; gene_version "1"; gene_name "AC098976.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 9754898 9755778 . + . gene_id "ENSG00000250425"; gene_version "1"; gene_name "OR7E35P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 9771153 10054936 . - . gene_id "ENSG00000109667"; gene_version "11"; gene_name "SLC2A9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 9781680 9784009 . + . gene_id "ENSG00000169676"; gene_version "5"; gene_name "DRD5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 9792751 9792861 . - . gene_id "ENSG00000252002"; gene_version "1"; gene_name "RNA5SP154"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 9922814 9924146 . + . gene_id "ENSG00000249219"; gene_version "1"; gene_name "AC108199.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 10006482 10009725 . + . gene_id "ENSG00000250413"; gene_version "1"; gene_name "AC005674.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 10068089 10073019 . - . gene_id "ENSG00000261490"; gene_version "1"; gene_name "AC005674.2"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 ensembl_havana gene 10074339 10116949 . - . gene_id "ENSG00000071127"; gene_version "16"; gene_name "WDR1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 10078611 10078692 . - . gene_id "ENSG00000264931"; gene_version "1"; gene_name "MIR3138"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 10115756 10115884 . - . gene_id "ENSG00000223086"; gene_version "1"; gene_name "RNA5SP155"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 10143367 10143655 . - . gene_id "ENSG00000250393"; gene_version "1"; gene_name "AC093664.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10167159 10167765 . - . gene_id "ENSG00000251296"; gene_version "1"; gene_name "AC006499.6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10199823 10200672 . - . gene_id "ENSG00000248777"; gene_version "1"; gene_name "AC006499.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10238213 10238235 . - . gene_id "ENSG00000271544"; gene_version "1"; gene_name "AC006499.8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10254926 10256621 . - . gene_id "ENSG00000250040"; gene_version "2"; gene_name "RAF1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10259445 10260138 . - . gene_id "ENSG00000250573"; gene_version "1"; gene_name "AC006499.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10267895 10268231 . - . gene_id "ENSG00000250074"; gene_version "1"; gene_name "AC006499.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10284961 10285708 . - . gene_id "ENSG00000250505"; gene_version "1"; gene_name "AC006499.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10292195 10292708 . - . gene_id "ENSG00000251278"; gene_version "1"; gene_name "AC006499.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10294463 10295579 . - . gene_id "ENSG00000251338"; gene_version "1"; gene_name "AC006499.7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 10410996 10411644 . + . gene_id "ENSG00000250613"; gene_version "1"; gene_name "AC110768.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 10439874 10457410 . - . gene_id "ENSG00000178163"; gene_version "7"; gene_name "ZNF518B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 10478524 10478923 . - . gene_id "ENSG00000248419"; gene_version "2"; gene_name "AC110768.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 10486395 10684865 . - . gene_id "ENSG00000109684"; gene_version "14"; gene_name "CLNK"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 10685003 10697661 . + . gene_id "ENSG00000249334"; gene_version "1"; gene_name "AC084048.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 10737572 10749586 . + . gene_id "ENSG00000283083"; gene_version "1"; gene_name "LINC02498"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 mirbase gene 11368827 11368921 . + . gene_id "ENSG00000207716"; gene_version "1"; gene_name "MIR572"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 11371975 11372892 . + . gene_id "ENSG00000250896"; gene_version "1"; gene_name "RNPS1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 11393150 11429765 . - . gene_id "ENSG00000002587"; gene_version "9"; gene_name "HS3ST1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 11414051 11414160 . - . gene_id "ENSG00000222182"; gene_version "1"; gene_name "RNA5SP156"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 11469250 11478196 . + . gene_id "ENSG00000251152"; gene_version "1"; gene_name "AC025539.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 11625714 11813958 . + . gene_id "ENSG00000249631"; gene_version "5"; gene_name "AC005699.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 11740948 11769468 . - . gene_id "ENSG00000248300"; gene_version "1"; gene_name "LINC02360"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 11914667 11919688 . + . gene_id "ENSG00000248262"; gene_version "1"; gene_name "AC108037.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 12223451 12251286 . + . gene_id "ENSG00000251210"; gene_version "5"; gene_name "LINC02270"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 12312588 12312690 . + . gene_id "ENSG00000212282"; gene_version "1"; gene_name "RNU6-578P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 12639086 12641009 . + . gene_id "ENSG00000249995"; gene_version "1"; gene_name "ECM1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 12640298 12640637 . - . gene_id "ENSG00000249780"; gene_version "1"; gene_name "AC093809.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 12859101 12864961 . - . gene_id "ENSG00000250371"; gene_version "1"; gene_name "AC007370.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 12947574 12948670 . - . gene_id "ENSG00000250098"; gene_version "1"; gene_name "AC007370.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 13051342 13051411 . + . gene_id "ENSG00000283271"; gene_version "1"; gene_name "RF00026"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 13333414 13338657 . + . gene_id "ENSG00000205940"; gene_version "8"; gene_name "HSP90AB2P"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 13361354 13484365 . - . gene_id "ENSG00000157869"; gene_version "14"; gene_name "RAB28"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 13526319 13534335 . - . gene_id "ENSG00000281202"; gene_version "2"; gene_name "LINC01097"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 13540830 13545050 . - . gene_id "ENSG00000109705"; gene_version "7"; gene_name "NKX3-2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 13546075 13547801 . - . gene_id "ENSG00000246095"; gene_version "2"; gene_name "LINC01096"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 13568738 13627723 . - . gene_id "ENSG00000038219"; gene_version "12"; gene_name "BOD1L1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 13627865 13627957 . + . gene_id "ENSG00000266240"; gene_version "1"; gene_name "MIR5091"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 13631820 13632599 . - . gene_id "ENSG00000249148"; gene_version "2"; gene_name "AC006445.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 13647697 13648400 . - . gene_id "ENSG00000242209"; gene_version "1"; gene_name "AC006445.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 13655179 13977075 . + . gene_id "ENSG00000250634"; gene_version "5"; gene_name "LINC01182"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 13777377 13782157 . - . gene_id "ENSG00000250497"; gene_version "1"; gene_name "AC007126.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 13977166 13978028 . + . gene_id "ENSG00000224569"; gene_version "3"; gene_name "AC095052.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 14111968 14140052 . + . gene_id "ENSG00000248698"; gene_version "6"; gene_name "LINC01085"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 14134936 14143592 . + . gene_id "ENSG00000251679"; gene_version "1"; gene_name "AC073848.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 14164455 14242813 . + . gene_id "ENSG00000249988"; gene_version "1"; gene_name "AC092546.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 14383123 14409078 . - . gene_id "ENSG00000251412"; gene_version "1"; gene_name "AC006296.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 14390439 14393992 . + . gene_id "ENSG00000248425"; gene_version "1"; gene_name "AC006296.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 14470465 14888169 . - . gene_id "ENSG00000248360"; gene_version "7"; gene_name "LINC00504"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 14505865 14506480 . - . gene_id "ENSG00000251252"; gene_version "1"; gene_name "MTND2P31"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 14690710 14690832 . + . gene_id "ENSG00000202449"; gene_version "1"; gene_name "RF00092"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 14909961 15002045 . - . gene_id "ENSG00000247624"; gene_version "6"; gene_name "CPEB2-DT"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 15002674 15070153 . + . gene_id "ENSG00000137449"; gene_version "15"; gene_name "CPEB2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 15004942 15427914 . - . gene_id "ENSG00000249252"; gene_version "5"; gene_name "AC098829.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 15093767 15094094 . - . gene_id "ENSG00000199420"; gene_version "1"; gene_name "RN7SKP170"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 15339818 15446166 . + . gene_id "ENSG00000163145"; gene_version "12"; gene_name "C1QTNF7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 15358141 15420032 . - . gene_id "ENSG00000251379"; gene_version "1"; gene_name "AC099550.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 15469865 15601557 . + . gene_id "ENSG00000048342"; gene_version "15"; gene_name "CC2D2A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 15492729 15492972 . - . gene_id "ENSG00000249930"; gene_version "1"; gene_name "AC007016.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 15563698 15564253 . - . gene_id "ENSG00000273133"; gene_version "1"; gene_name "AC116651.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 15604539 15681679 . - . gene_id "ENSG00000118564"; gene_version "14"; gene_name "FBXL5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 15681662 15705565 . + . gene_id "ENSG00000237765"; gene_version "6"; gene_name "FAM200B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 15702950 15738313 . + . gene_id "ENSG00000109743"; gene_version "10"; gene_name "BST1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 15730962 15731627 . - . gene_id "ENSG00000214846"; gene_version "4"; gene_name "AC114744.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 15743196 15743582 . + . gene_id "ENSG00000248188"; gene_version "2"; gene_name "AC005798.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 15778275 15853230 . + . gene_id "ENSG00000004468"; gene_version "12"; gene_name "CD38"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 15864938 15865940 . - . gene_id "ENSG00000251644"; gene_version "1"; gene_name "HPRT1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 15935569 15938740 . - . gene_id "ENSG00000137440"; gene_version "4"; gene_name "FGFBP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 15960243 15969309 . - . gene_id "ENSG00000137441"; gene_version "7"; gene_name "FGFBP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 15963076 16084378 . - . gene_id "ENSG00000007062"; gene_version "11"; gene_name "PROM1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 16160505 16227410 . - . gene_id "ENSG00000169762"; gene_version "16"; gene_name "TAPT1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 16178939 16183120 . + . gene_id "ENSG00000249234"; gene_version "1"; gene_name "AC108063.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 16226685 16320140 . + . gene_id "ENSG00000263327"; gene_version "6"; gene_name "TAPT1-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 16256308 16256555 . - . gene_id "ENSG00000242358"; gene_version "1"; gene_name "RPS21P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 16307456 16308167 . + . gene_id "ENSG00000248851"; gene_version "1"; gene_name "AC006427.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 16360686 16397323 . - . gene_id "ENSG00000249506"; gene_version "3"; gene_name "ZEB2P1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 16400430 16512187 . + . gene_id "ENSG00000248138"; gene_version "5"; gene_name "AC097515.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 16501541 16898809 . - . gene_id "ENSG00000169744"; gene_version "12"; gene_name "LDB2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 16973275 17073903 . - . gene_id "ENSG00000249998"; gene_version "1"; gene_name "AC106894.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 17061878 17062165 . + . gene_id "ENSG00000251212"; gene_version "1"; gene_name "MTND5P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 17171757 17186059 . - . gene_id "ENSG00000250819"; gene_version "1"; gene_name "LINC02493"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 17320746 17320882 . - . gene_id "ENSG00000206780"; gene_version "1"; gene_name "SNORA75B"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 17427696 17428274 . - . gene_id "ENSG00000215278"; gene_version "4"; gene_name "RPS7P6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 17460261 17512234 . - . gene_id "ENSG00000151552"; gene_version "11"; gene_name "QDPR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 17515165 17527104 . + . gene_id "ENSG00000249581"; gene_version "2"; gene_name "CLRN2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 17552117 17552752 . - . gene_id "ENSG00000249488"; gene_version "1"; gene_name "NACAP5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 17557892 17558045 . - . gene_id "ENSG00000283219"; gene_version "1"; gene_name "AC006160.2"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 17577192 17607972 . + . gene_id "ENSG00000002549"; gene_version "12"; gene_name "LAP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 17587467 17614571 . - . gene_id "ENSG00000249502"; gene_version "1"; gene_name "AC006160.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 17614631 17634105 . + . gene_id "ENSG00000118579"; gene_version "12"; gene_name "MED28"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 17629306 17781512 . - . gene_id "ENSG00000047662"; gene_version "4"; gene_name "FAM184B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 17800655 17810758 . - . gene_id "ENSG00000163257"; gene_version "10"; gene_name "DCAF16"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 17810902 17844862 . + . gene_id "ENSG00000109805"; gene_version "9"; gene_name "NCAPG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 17841199 18021876 . - . gene_id "ENSG00000178177"; gene_version "15"; gene_name "LCORL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 17911674 17912976 . + . gene_id "ENSG00000235413"; gene_version "3"; gene_name "KRT18P63"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 18488062 18489508 . - . gene_id "ENSG00000251048"; gene_version "1"; gene_name "AC093871.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 19098199 19098740 . + . gene_id "ENSG00000279918"; gene_version "1"; gene_name "AC006840.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 19172335 19456994 . - . gene_id "ENSG00000248238"; gene_version "1"; gene_name "LINC02438"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 19181814 19181856 . - . gene_id "ENSG00000251816"; gene_version "1"; gene_name "RNA5SP157"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 19257951 19258337 . - . gene_id "ENSG00000279379"; gene_version "1"; gene_name "AC024595.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 19455436 19909692 . + . gene_id "ENSG00000248515"; gene_version "1"; gene_name "AC024230.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 19747179 19754591 . - . gene_id "ENSG00000249441"; gene_version "1"; gene_name "AC110767.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 19813749 19814231 . + . gene_id "ENSG00000241612"; gene_version "1"; gene_name "AC114728.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 20037560 20037972 . - . gene_id "ENSG00000250611"; gene_version "1"; gene_name "AC098862.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 20253260 20620561 . + . gene_id "ENSG00000145147"; gene_version "19"; gene_name "SLIT2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 20392189 20394856 . + . gene_id "ENSG00000248228"; gene_version "1"; gene_name "SLIT2-IT1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 mirbase gene 20528275 20528384 . + . gene_id "ENSG00000207732"; gene_version "1"; gene_name "MIR218-1"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 20696282 20752907 . + . gene_id "ENSG00000163138"; gene_version "18"; gene_name "PACRGL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 20728616 21948799 . - . gene_id "ENSG00000185774"; gene_version "15"; gene_name "KCNIP4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 20766808 20767372 . + . gene_id "ENSG00000272995"; gene_version "1"; gene_name "AC097505.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 21304542 21316485 . + . gene_id "ENSG00000250243"; gene_version "2"; gene_name "AC110296.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 mirbase gene 21464700 21464758 . - . gene_id "ENSG00000283281"; gene_version "1"; gene_name "MIR7978"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 21582096 21613728 . + . gene_id "ENSG00000250092"; gene_version "2"; gene_name "AC096576.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 21656511 21656869 . - . gene_id "ENSG00000242768"; gene_version "2"; gene_name "AC096576.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 21697450 21719026 . + . gene_id "ENSG00000248343"; gene_version "1"; gene_name "AC096576.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 21843341 21853188 . - . gene_id "ENSG00000280650"; gene_version "1"; gene_name "KCNIP4-IT1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 21949015 22330330 . + . gene_id "ENSG00000250039"; gene_version "3"; gene_name "AC096719.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 22118983 22119089 . + . gene_id "ENSG00000239001"; gene_version "1"; gene_name "RNU6-420P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 22345071 22516054 . - . gene_id "ENSG00000152990"; gene_version "13"; gene_name "ADGRA3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 22594196 22594450 . + . gene_id "ENSG00000244538"; gene_version "1"; gene_name "AC098583.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 22607501 22611063 . + . gene_id "ENSG00000251516"; gene_version "1"; gene_name "AC098583.2"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 22692914 22819575 . + . gene_id "ENSG00000249948"; gene_version "6"; gene_name "GBA3"; gene_source "ensembl_havana"; gene_biotype "polymorphic_pseudogene"; -chr4 ensembl_havana gene 22727375 22727950 . - . gene_id "ENSG00000237350"; gene_version "1"; gene_name "CDC42P6"; gene_source "ensembl_havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 22997551 23056862 . + . gene_id "ENSG00000248837"; gene_version "5"; gene_name "AC097512.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 23105502 23123487 . + . gene_id "ENSG00000249645"; gene_version "1"; gene_name "AC114912.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 23234625 23285573 . - . gene_id "ENSG00000249547"; gene_version "1"; gene_name "AC092440.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 23514940 23515284 . - . gene_id "ENSG00000251220"; gene_version "2"; gene_name "RFPL4AP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 23560923 23768652 . + . gene_id "ENSG00000250137"; gene_version "1"; gene_name "AC093607.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 23723262 23733579 . - . gene_id "ENSG00000251292"; gene_version "1"; gene_name "ERVH-1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 23755041 23904089 . - . gene_id "ENSG00000109819"; gene_version "8"; gene_name "PPARGC1A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 23779590 23782560 . + . gene_id "ENSG00000249453"; gene_version "1"; gene_name "AC092834.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 24517441 24584550 . - . gene_id "ENSG00000109606"; gene_version "12"; gene_name "DHX15"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 24520192 24520290 . - . gene_id "ENSG00000207697"; gene_version "1"; gene_name "MIR573"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 24563193 24563461 . - . gene_id "ENSG00000243005"; gene_version "3"; gene_name "RN7SL16P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 24658072 24658375 . - . gene_id "ENSG00000249256"; gene_version "2"; gene_name "ATP5MGP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 24659856 24671568 . + . gene_id "ENSG00000261121"; gene_version "1"; gene_name "LINC02473"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 24768049 24768331 . + . gene_id "ENSG00000251638"; gene_version "1"; gene_name "AC006390.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 24771467 24772420 . + . gene_id "ENSG00000248444"; gene_version "1"; gene_name "HNRNPA1P65"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 24789912 24800842 . + . gene_id "ENSG00000109610"; gene_version "5"; gene_name "SOD3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 24806117 24980204 . - . gene_id "ENSG00000181982"; gene_version "18"; gene_name "CCDC149"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 24998847 25030879 . - . gene_id "ENSG00000153012"; gene_version "11"; gene_name "LGI2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 25120014 25160442 . - . gene_id "ENSG00000109618"; gene_version "11"; gene_name "SEPSECS"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 25160641 25201440 . + . gene_id "ENSG00000281501"; gene_version "1"; gene_name "SEPSECS-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 25160663 25277306 . + . gene_id "ENSG00000281028"; gene_version "1"; gene_name "AC104662.2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 25220403 25220913 . + . gene_id "ENSG00000271172"; gene_version "1"; gene_name "AC104662.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 25233975 25279092 . + . gene_id "ENSG00000038210"; gene_version "12"; gene_name "PI4K2B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 25250545 25250639 . + . gene_id "ENSG00000278135"; gene_version "1"; gene_name "RF00004"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 25312785 25370383 . + . gene_id "ENSG00000168228"; gene_version "14"; gene_name "ZCCHC4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 25377213 25418498 . + . gene_id "ENSG00000053900"; gene_version "10"; gene_name "ANAPC4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 25472517 25473815 . + . gene_id "ENSG00000249320"; gene_version "1"; gene_name "AC133963.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 25504997 25506675 . + . gene_id "ENSG00000248608"; gene_version "2"; gene_name "AC133963.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 25598564 25598625 . - . gene_id "ENSG00000238632"; gene_version "1"; gene_name "RNU7-126P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 25608711 25619468 . + . gene_id "ENSG00000248545"; gene_version "2"; gene_name "AC092436.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 25622777 25623601 . + . gene_id "ENSG00000228154"; gene_version "3"; gene_name "AC092436.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 25648011 25678748 . + . gene_id "ENSG00000157765"; gene_version "12"; gene_name "SLC34A2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 25678850 25679020 . + . gene_id "ENSG00000242640"; gene_version "1"; gene_name "RPS29P11"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 25686202 25686458 . - . gene_id "ENSG00000249277"; gene_version "1"; gene_name "AC092436.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 25718082 25719745 . - . gene_id "ENSG00000250050"; gene_version "1"; gene_name "MTND4P9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 25719755 25720030 . - . gene_id "ENSG00000248133"; gene_version "1"; gene_name "MTND4LP22"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 25720099 25720431 . - . gene_id "ENSG00000251353"; gene_version "1"; gene_name "MTND3P5"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 25720516 25721056 . - . gene_id "ENSG00000248654"; gene_version "1"; gene_name "MTCO3P44"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 25747427 25863760 . - . gene_id "ENSG00000091490"; gene_version "10"; gene_name "SEL1L3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 25770266 25773577 . + . gene_id "ENSG00000250541"; gene_version "1"; gene_name "AC092436.4"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 25861830 25929874 . + . gene_id "ENSG00000250317"; gene_version "8"; gene_name "SMIM20"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 25864881 25869550 . - . gene_id "ENSG00000251009"; gene_version "2"; gene_name "AC133961.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 26070754 26104258 . + . gene_id "ENSG00000283314"; gene_version "1"; gene_name "LINC02357"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 26111865 26113839 . + . gene_id "ENSG00000248452"; gene_version "2"; gene_name "AC097714.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 26163455 26435131 . + . gene_id "ENSG00000168214"; gene_version "20"; gene_name "RBPJ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 26481400 26490462 . - . gene_id "ENSG00000163394"; gene_version "5"; gene_name "CCKAR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 26576437 26755351 . + . gene_id "ENSG00000109680"; gene_version "10"; gene_name "TBC1D19"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 26702309 26702388 . + . gene_id "ENSG00000200999"; gene_version "1"; gene_name "RF00284"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 26857678 27025381 . + . gene_id "ENSG00000109689"; gene_version "15"; gene_name "STIM2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 26859806 26860599 . - . gene_id "ENSG00000240005"; gene_version "5"; gene_name "AC106047.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 26873561 26874349 . - . gene_id "ENSG00000248340"; gene_version "2"; gene_name "AC106047.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 27133996 27140051 . - . gene_id "ENSG00000251080"; gene_version "1"; gene_name "AC024132.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 27207505 27218404 . - . gene_id "ENSG00000205830"; gene_version "1"; gene_name "AC024132.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 27217479 27282225 . + . gene_id "ENSG00000249699"; gene_version "1"; gene_name "LINC02261"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 27223319 27223427 . - . gene_id "ENSG00000222206"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 27262506 27267254 . - . gene_id "ENSG00000251325"; gene_version "1"; gene_name "AC024132.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 27585145 27586144 . + . gene_id "ENSG00000250858"; gene_version "1"; gene_name "IGBP1P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 27967723 27985063 . - . gene_id "ENSG00000251410"; gene_version "1"; gene_name "AC007106.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 28362279 28402864 . - . gene_id "ENSG00000250038"; gene_version "5"; gene_name "AC109588.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 28435449 28600275 . + . gene_id "ENSG00000250064"; gene_version "1"; gene_name "AC097480.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 28711198 28711476 . + . gene_id "ENSG00000243548"; gene_version "3"; gene_name "RN7SL101P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 mirbase gene 28819582 28819668 . + . gene_id "ENSG00000283275"; gene_version "1"; gene_name "MIR4275"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 28823244 28824211 . - . gene_id "ENSG00000250927"; gene_version "1"; gene_name "MESTP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 28996524 29014594 . + . gene_id "ENSG00000250190"; gene_version "1"; gene_name "LINC02364"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 29010619 29011021 . - . gene_id "ENSG00000276507"; gene_version "1"; gene_name "AC068944.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 29046591 29048765 . + . gene_id "ENSG00000249228"; gene_version "1"; gene_name "AC068944.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 29118308 29202770 . + . gene_id "ENSG00000248176"; gene_version "1"; gene_name "AC109349.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 29214398 29221162 . + . gene_id "ENSG00000248338"; gene_version "1"; gene_name "LINC02472"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 29407100 29408012 . + . gene_id "ENSG00000251373"; gene_version "1"; gene_name "AC092593.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 29465701 29467850 . - . gene_id "ENSG00000251113"; gene_version "2"; gene_name "AC092593.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 29510635 29510737 . + . gene_id "ENSG00000283666"; gene_version "1"; gene_name "RF00026"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 29748757 29750100 . + . gene_id "ENSG00000249542"; gene_version "2"; gene_name "EEF1A1P21"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 29907659 29907791 . - . gene_id "ENSG00000249564"; gene_version "1"; gene_name "AC097510.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 29962644 29963758 . - . gene_id "ENSG00000244031"; gene_version "3"; gene_name "RPS3AP17"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 30006951 30008316 . - . gene_id "ENSG00000248281"; gene_version "1"; gene_name "AC106868.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 30720415 31146805 . + . gene_id "ENSG00000169851"; gene_version "15"; gene_name "PCDH7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 30776257 30793970 . - . gene_id "ENSG00000249678"; gene_version "1"; gene_name "AC097716.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 30884443 30885182 . - . gene_id "ENSG00000250624"; gene_version "1"; gene_name "MTCYBP43"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 31171144 31211675 . + . gene_id "ENSG00000251182"; gene_version "1"; gene_name "LINC02497"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 31350284 31351725 . + . gene_id "ENSG00000251434"; gene_version "1"; gene_name "AC104071.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 31506666 31558821 . + . gene_id "ENSG00000249882"; gene_version "1"; gene_name "LINC02501"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 31997397 32155406 . + . gene_id "ENSG00000251129"; gene_version "1"; gene_name "LINC02506"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 32351038 32353220 . + . gene_id "ENSG00000251329"; gene_version "1"; gene_name "LINC02353"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 33010948 33011746 . - . gene_id "ENSG00000250076"; gene_version "1"; gene_name "AC017013.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 33238239 33238670 . - . gene_id "ENSG00000249452"; gene_version "2"; gene_name "AC093878.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 33400538 33400679 . + . gene_id "ENSG00000249766"; gene_version "1"; gene_name "AC097535.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 33433510 33437877 . + . gene_id "ENSG00000248417"; gene_version "1"; gene_name "AC097535.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 33776347 34039893 . - . gene_id "ENSG00000250954"; gene_version "5"; gene_name "AC016687.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 33850591 33979936 . + . gene_id "ENSG00000250723"; gene_version "5"; gene_name "AC016687.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 33968174 33968526 . + . gene_id "ENSG00000239983"; gene_version "1"; gene_name "AC016687.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 34120894 34269747 . - . gene_id "ENSG00000248685"; gene_version "5"; gene_name "LINC02484"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 34657606 34669432 . + . gene_id "ENSG00000250597"; gene_version "5"; gene_name "AC093689.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 34714270 34714598 . + . gene_id "ENSG00000275250"; gene_version "1"; gene_name "AC093913.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 34966241 34966344 . - . gene_id "ENSG00000238694"; gene_version "1"; gene_name "RF01210"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 35487812 35489750 . + . gene_id "ENSG00000250416"; gene_version "2"; gene_name "SEC63P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 35495898 35496003 . + . gene_id "ENSG00000206665"; gene_version "1"; gene_name "RNU6-573P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 35948221 36244509 . - . gene_id "ENSG00000047365"; gene_version "11"; gene_name "ARAP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 36065060 36065726 . - . gene_id "ENSG00000248466"; gene_version "1"; gene_name "AC098827.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 36244116 36274220 . + . gene_id "ENSG00000247193"; gene_version "2"; gene_name "AC104078.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 36281622 36345756 . + . gene_id "ENSG00000197057"; gene_version "9"; gene_name "DTHD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 36311190 36392410 . - . gene_id "ENSG00000251438"; gene_version "1"; gene_name "AC104078.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 mirbase gene 36426366 36426428 . - . gene_id "ENSG00000283207"; gene_version "1"; gene_name "MIR1255B1"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 36496537 36641900 . - . gene_id "ENSG00000248215"; gene_version "5"; gene_name "LINC02505"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 36506043 36508869 . + . gene_id "ENSG00000251588"; gene_version "2"; gene_name "AC125336.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 37001816 37020708 . + . gene_id "ENSG00000261761"; gene_version "3"; gene_name "AL136537.2"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 37078577 37125424 . + . gene_id "ENSG00000247810"; gene_version "6"; gene_name "AL136537.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 mirbase gene 37241910 37241991 . - . gene_id "ENSG00000264319"; gene_version "1"; gene_name "MIR4801"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 37244220 37449465 . + . gene_id "ENSG00000174145"; gene_version "7"; gene_name "NWD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 37453941 37623495 . + . gene_id "ENSG00000154274"; gene_version "14"; gene_name "C4orf19"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 37588087 37588875 . - . gene_id "ENSG00000248936"; gene_version "1"; gene_name "AC027607.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 37590800 37686376 . - . gene_id "ENSG00000181826"; gene_version "9"; gene_name "RELL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 37699895 37700002 . - . gene_id "ENSG00000207075"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 37821361 37821838 . + . gene_id "ENSG00000239532"; gene_version "1"; gene_name "AC108022.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 37826633 37862937 . + . gene_id "ENSG00000169299"; gene_version "13"; gene_name "PGM2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 37866561 37867091 . - . gene_id "ENSG00000279386"; gene_version "1"; gene_name "AC021106.3"; gene_source "ensembl_havana"; gene_biotype "TEC"; -chr4 havana gene 37868292 37869978 . + . gene_id "ENSG00000249863"; gene_version "2"; gene_name "AC021106.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 37891087 38139175 . + . gene_id "ENSG00000065882"; gene_version "15"; gene_name "TBC1D1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 37960435 37961125 . + . gene_id "ENSG00000250254"; gene_version "1"; gene_name "PTTG2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 37995494 37996203 . - . gene_id "ENSG00000251332"; gene_version "1"; gene_name "AC021106.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 38006784 38007105 . - . gene_id "ENSG00000249649"; gene_version "1"; gene_name "MRPS33P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 38286994 38287491 . + . gene_id "ENSG00000251642"; gene_version "1"; gene_name "AC098680.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 38366914 38385759 . + . gene_id "ENSG00000248227"; gene_version "1"; gene_name "LINC02513"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 38390754 38391675 . + . gene_id "ENSG00000280015"; gene_version "1"; gene_name "AC024023.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 38420662 38523180 . - . gene_id "ENSG00000249534"; gene_version "1"; gene_name "LINC01258"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 38509767 38518056 . + . gene_id "ENSG00000249667"; gene_version "1"; gene_name "LINC01259"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 38564003 38570671 . + . gene_id "ENSG00000251635"; gene_version "1"; gene_name "LINC02278"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 38612701 38664883 . - . gene_id "ENSG00000231160"; gene_version "9"; gene_name "KLF3-AS1"; gene_source "ensembl_havana"; gene_biotype "processed_transcript"; -chr4 havana gene 38618265 38619437 . - . gene_id "ENSG00000271958"; gene_version "1"; gene_name "AC021860.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 38664196 38701042 . + . gene_id "ENSG00000109787"; gene_version "12"; gene_name "KLF3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 38758791 38758892 . - . gene_id "ENSG00000222230"; gene_version "1"; gene_name "RNA5SP158"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl_havana gene 38772239 38782990 . - . gene_id "ENSG00000174123"; gene_version "10"; gene_name "TLR10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 38790677 38856817 . - . gene_id "ENSG00000174125"; gene_version "7"; gene_name "TLR1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 38823715 38856817 . - . gene_id "ENSG00000174130"; gene_version "12"; gene_name "TLR6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 38867677 38945739 . + . gene_id "ENSG00000197712"; gene_version "11"; gene_name "FAM114A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 38868032 38868127 . + . gene_id "ENSG00000207944"; gene_version "1"; gene_name "MIR574"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 38966744 39032922 . - . gene_id "ENSG00000121895"; gene_version "7"; gene_name "TMEM156"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 39045039 39126857 . + . gene_id "ENSG00000109790"; gene_version "16"; gene_name "KLHL5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 39112677 39126818 . - . gene_id "ENSG00000249207"; gene_version "1"; gene_name "AC079921.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 39133913 39135608 . + . gene_id "ENSG00000249685"; gene_version "1"; gene_name "AC079921.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 39182404 39285810 . + . gene_id "ENSG00000157796"; gene_version "17"; gene_name "WDR19"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 39287456 39366375 . - . gene_id "ENSG00000035928"; gene_version "15"; gene_name "RFC1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 39297605 39297711 . - . gene_id "ENSG00000206675"; gene_version "1"; gene_name "RNU6-32P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 39399149 39399248 . + . gene_id "ENSG00000222592"; gene_version "1"; gene_name "RNU6-887P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 39406853 39451536 . + . gene_id "ENSG00000134962"; gene_version "6"; gene_name "KLB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 39411910 39411974 . + . gene_id "ENSG00000264621"; gene_version "1"; gene_name "MIR5591"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 39441665 39441764 . + . gene_id "ENSG00000238797"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 39452521 39458949 . - . gene_id "ENSG00000163682"; gene_version "16"; gene_name "RPL9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 39458587 39485109 . + . gene_id "ENSG00000121897"; gene_version "14"; gene_name "LIAS"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 39480255 39481905 . + . gene_id "ENSG00000224097"; gene_version "5"; gene_name "AC021148.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 39498755 39528311 . - . gene_id "ENSG00000109814"; gene_version "11"; gene_name "UGDH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 39528019 39594707 . + . gene_id "ENSG00000249348"; gene_version "1"; gene_name "UGDH-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 39546330 39639090 . - . gene_id "ENSG00000163683"; gene_version "11"; gene_name "SMIM14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 39621012 39621073 . + . gene_id "ENSG00000252796"; gene_version "1"; gene_name "RNU7-11P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 39639140 39666644 . + . gene_id "ENSG00000255458"; gene_version "5"; gene_name "AC108471.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 39698044 39782792 . + . gene_id "ENSG00000078140"; gene_version "13"; gene_name "UBE2K"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 39710085 39710176 . - . gene_id "ENSG00000252975"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 39713842 39714451 . - . gene_id "ENSG00000249019"; gene_version "2"; gene_name "AC108471.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 39761000 39761298 . + . gene_id "ENSG00000243260"; gene_version "3"; gene_name "RN7SL558P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 39770081 39771371 . - . gene_id "ENSG00000180610"; gene_version "10"; gene_name "ZBTB12BP"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 39822863 39977956 . - . gene_id "ENSG00000121892"; gene_version "14"; gene_name "PDS5A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 39932454 39933561 . + . gene_id "ENSG00000271278"; gene_version "1"; gene_name "ELOCP33"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 39936753 39936855 . + . gene_id "ENSG00000252970"; gene_version "1"; gene_name "RNA5SP159"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 39973128 39973442 . - . gene_id "ENSG00000250568"; gene_version "1"; gene_name "AC098591.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 39973444 39974338 . + . gene_id "ENSG00000231707"; gene_version "4"; gene_name "PABPC1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 40020240 40021517 . + . gene_id "ENSG00000249064"; gene_version "1"; gene_name "KRT18P25"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 40042917 40057199 . - . gene_id "ENSG00000205794"; gene_version "4"; gene_name "AC098591.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 40056826 40158252 . + . gene_id "ENSG00000078177"; gene_version "13"; gene_name "N4BP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 40077884 40077982 . + . gene_id "ENSG00000200455"; gene_version "1"; gene_name "RNU6-1112P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 40082983 40083106 . + . gene_id "ENSG00000201863"; gene_version "1"; gene_name "RF00432"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 40142198 40142365 . - . gene_id "ENSG00000248977"; gene_version "1"; gene_name "AC095057.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 40166675 40167831 . + . gene_id "ENSG00000260296"; gene_version "1"; gene_name "AC095057.3"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 ensembl_havana gene 40191053 40246967 . + . gene_id "ENSG00000168421"; gene_version "12"; gene_name "RHOH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 40265472 40266457 . + . gene_id "ENSG00000250338"; gene_version "1"; gene_name "AC095057.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 40316485 40330419 . + . gene_id "ENSG00000249241"; gene_version "1"; gene_name "LINC02265"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 40335329 40355217 . + . gene_id "ENSG00000174343"; gene_version "5"; gene_name "CHRNA9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 40377452 40377513 . - . gene_id "ENSG00000239010"; gene_version "1"; gene_name "RNU7-74P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 40423267 40630875 . - . gene_id "ENSG00000163694"; gene_version "14"; gene_name "RBM47"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 40426119 40427585 . + . gene_id "ENSG00000250893"; gene_version "1"; gene_name "AC098869.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 40491733 40492024 . + . gene_id "ENSG00000242197"; gene_version "2"; gene_name "AC098869.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 40502040 40502119 . - . gene_id "ENSG00000263642"; gene_version "1"; gene_name "MIR4802"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 40749897 40809985 . + . gene_id "ENSG00000179299"; gene_version "16"; gene_name "NSUN7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 40786110 40786710 . + . gene_id "ENSG00000248780"; gene_version "1"; gene_name "ARL4AP2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 40810027 41216714 . - . gene_id "ENSG00000163697"; gene_version "16"; gene_name "APBB2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 40812779 40826151 . + . gene_id "ENSG00000250906"; gene_version "1"; gene_name "AC131953.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 40826655 40826765 . - . gene_id "ENSG00000207195"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 40990154 40990273 . + . gene_id "ENSG00000201736"; gene_version "1"; gene_name "RNA5SP160"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl gene 41084607 41084713 . + . gene_id "ENSG00000199790"; gene_version "1"; gene_name "RNU6-836P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 41113942 41114045 . + . gene_id "ENSG00000207198"; gene_version "1"; gene_name "RNU6-1195P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 41220074 41256727 . - . gene_id "ENSG00000251173"; gene_version "1"; gene_name "UCHL1-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 41256413 41268455 . + . gene_id "ENSG00000154277"; gene_version "12"; gene_name "UCHL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 41303237 41303337 . - . gene_id "ENSG00000207481"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 41359607 41700044 . + . gene_id "ENSG00000064042"; gene_version "17"; gene_name "LIMCH1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 41389115 41389593 . + . gene_id "ENSG00000239627"; gene_version "3"; gene_name "RPL12P20"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 41688858 41692797 . - . gene_id "ENSG00000249216"; gene_version "1"; gene_name "AC105389.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 41722538 41723512 . - . gene_id "ENSG00000249081"; gene_version "1"; gene_name "OR5M14P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 41744082 41748970 . - . gene_id "ENSG00000109132"; gene_version "6"; gene_name "PHOX2B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 41748293 41824119 . + . gene_id "ENSG00000250467"; gene_version "1"; gene_name "AC105389.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 41750345 41757341 . + . gene_id "ENSG00000249122"; gene_version "1"; gene_name "AC105389.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 41771945 41772103 . - . gene_id "ENSG00000200338"; gene_version "1"; gene_name "RNU1-49P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 41842154 41843950 . - . gene_id "ENSG00000249745"; gene_version "1"; gene_name "HMGB1P28"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 41872747 41882955 . - . gene_id "ENSG00000245870"; gene_version "3"; gene_name "LINC00682"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 41883060 41894579 . - . gene_id "ENSG00000249771"; gene_version "1"; gene_name "AC108210.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 41924180 41924380 . + . gene_id "ENSG00000249887"; gene_version "1"; gene_name "AC108210.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 41935120 41960572 . + . gene_id "ENSG00000109133"; gene_version "12"; gene_name "TMEM33"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 41981696 41986467 . + . gene_id "ENSG00000182308"; gene_version "6"; gene_name "DCAF4L1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 41988741 41989237 . - . gene_id "ENSG00000272862"; gene_version "1"; gene_name "AC106052.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 41990472 42090457 . + . gene_id "ENSG00000014824"; gene_version "13"; gene_name "SLC30A9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 42029209 42030123 . + . gene_id "ENSG00000249212"; gene_version "1"; gene_name "ATP1B1P1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 42110938 42152878 . - . gene_id "ENSG00000188848"; gene_version "15"; gene_name "BEND4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 42151028 42268110 . + . gene_id "ENSG00000285454"; gene_version "1"; gene_name "AC111006.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 42281830 42391268 . - . gene_id "ENSG00000250781"; gene_version "1"; gene_name "AC024022.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 42397839 42402487 . + . gene_id "ENSG00000178343"; gene_version "4"; gene_name "SHISA3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 42408373 42657105 . - . gene_id "ENSG00000124406"; gene_version "16"; gene_name "ATP8A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 42471810 42472380 . + . gene_id "ENSG00000240167"; gene_version "1"; gene_name "RPS7P7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 42561457 42562425 . - . gene_id "ENSG00000248283"; gene_version "2"; gene_name "CCNL2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 42657496 42657928 . + . gene_id "ENSG00000260519"; gene_version "1"; gene_name "AC096734.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 42706107 42707335 . + . gene_id "ENSG00000251517"; gene_version "1"; gene_name "AC096734.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 42892396 42892618 . + . gene_id "ENSG00000252595"; gene_version "1"; gene_name "RN7SKP82"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 42893267 43030658 . + . gene_id "ENSG00000215203"; gene_version "2"; gene_name "GRXCR1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 43133867 43234956 . + . gene_id "ENSG00000248939"; gene_version "1"; gene_name "AC111198.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 43340875 43345600 . + . gene_id "ENSG00000250657"; gene_version "1"; gene_name "AC097451.1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 43388157 43388437 . + . gene_id "ENSG00000277096"; gene_version "1"; gene_name "AC098590.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 43410041 43410937 . - . gene_id "ENSG00000213851"; gene_version "3"; gene_name "AC098590.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 43457527 43492543 . - . gene_id "ENSG00000248143"; gene_version "1"; gene_name "LINC02383"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 43586328 43588097 . + . gene_id "ENSG00000251501"; gene_version "1"; gene_name "AC114774.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 43598544 43598844 . - . gene_id "ENSG00000239464"; gene_version "3"; gene_name "RN7SL691P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 43863274 43863549 . + . gene_id "ENSG00000239679"; gene_version "3"; gene_name "RN7SL193P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 43898962 43899351 . + . gene_id "ENSG00000124399"; gene_version "4"; gene_name "NDUFB4P12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 43980006 43981620 . - . gene_id "ENSG00000250863"; gene_version "1"; gene_name "AC110799.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 44016861 44022063 . + . gene_id "ENSG00000251350"; gene_version "1"; gene_name "LINC02475"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 44173909 44448807 . - . gene_id "ENSG00000183783"; gene_version "6"; gene_name "KCTD8"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 44533615 44533880 . + . gene_id "ENSG00000251159"; gene_version "1"; gene_name "AC093852.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 44622065 44678556 . - . gene_id "ENSG00000177752"; gene_version "14"; gene_name "YIPF7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 44678427 44700926 . + . gene_id "ENSG00000151806"; gene_version "13"; gene_name "GUF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 44682200 44726595 . - . gene_id "ENSG00000163281"; gene_version "11"; gene_name "GNPDA2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 44693946 44694386 . - . gene_id "ENSG00000273369"; gene_version "1"; gene_name "AC096586.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 44704405 44704965 . + . gene_id "ENSG00000272936"; gene_version "1"; gene_name "AC096586.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 44840380 44841402 . - . gene_id "ENSG00000249729"; gene_version "2"; gene_name "AC093755.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 44944015 44944961 . - . gene_id "ENSG00000248987"; gene_version "2"; gene_name "PRDX4P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 44994426 44996022 . + . gene_id "ENSG00000275959"; gene_version "1"; gene_name "AC108467.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 45009540 45051652 . + . gene_id "ENSG00000248744"; gene_version "1"; gene_name "AC108467.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 45323253 45326028 . - . gene_id "ENSG00000248320"; gene_version "1"; gene_name "THAP12P9"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 45414337 45414910 . - . gene_id "ENSG00000224560"; gene_version "3"; gene_name "AC108043.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 45480030 45480136 . + . gene_id "ENSG00000200720"; gene_version "1"; gene_name "RNU6-931P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 45995119 45995423 . + . gene_id "ENSG00000222257"; gene_version "1"; gene_name "RN7SKP199"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 46035769 46124081 . - . gene_id "ENSG00000163285"; gene_version "7"; gene_name "GABRG1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 46243548 46244215 . - . gene_id "ENSG00000260878"; gene_version "1"; gene_name "AC104072.1"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 ensembl_havana gene 46248427 46475230 . - . gene_id "ENSG00000151834"; gene_version "15"; gene_name "GABRA2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 46390255 46433188 . + . gene_id "ENSG00000249330"; gene_version "1"; gene_name "AC095060.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 46531237 46531342 . - . gene_id "ENSG00000252243"; gene_version "1"; gene_name "RNU6-412P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 46723830 46724408 . - . gene_id "ENSG00000249936"; gene_version "3"; gene_name "RAC1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 46734827 46909235 . - . gene_id "ENSG00000170516"; gene_version "16"; gene_name "COX7B2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 46918900 46994407 . - . gene_id "ENSG00000109158"; gene_version "10"; gene_name "GABRA4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 46993723 47426444 . + . gene_id "ENSG00000163288"; gene_version "13"; gene_name "GABRB1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 47431960 47438959 . + . gene_id "ENSG00000260918"; gene_version "1"; gene_name "AC107398.3"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 ensembl_havana gene 47450796 47463719 . - . gene_id "ENSG00000169019"; gene_version "10"; gene_name "COMMD8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 47463784 47470477 . + . gene_id "ENSG00000282904"; gene_version "1"; gene_name "AC107398.4"; gene_source "havana"; gene_biotype "bidirectional_promoter_lncRNA"; -chr4 ensembl_havana gene 47485288 47593486 . + . gene_id "ENSG00000145246"; gene_version "13"; gene_name "ATP10D"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 47490967 47491471 . - . gene_id "ENSG00000242431"; gene_version "2"; gene_name "AC107398.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 47556731 47560259 . - . gene_id "ENSG00000248254"; gene_version "1"; gene_name "AC107398.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 47593998 47838106 . - . gene_id "ENSG00000145244"; gene_version "11"; gene_name "CORIN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 47652669 47652743 . + . gene_id "ENSG00000277388"; gene_version "1"; gene_name "MIR8053"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 47706372 47706987 . + . gene_id "ENSG00000242262"; gene_version "1"; gene_name "AC092597.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 47831385 47896709 . + . gene_id "ENSG00000282917"; gene_version "1"; gene_name "AC107068.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 47840122 47844339 . - . gene_id "ENSG00000259959"; gene_version "1"; gene_name "AC107068.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 47847233 47914667 . - . gene_id "ENSG00000170448"; gene_version "11"; gene_name "NFXL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 47914142 48040173 . + . gene_id "ENSG00000163293"; gene_version "11"; gene_name "NIPAL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 47935977 48016672 . - . gene_id "ENSG00000198515"; gene_version "13"; gene_name "CNGA1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 48066393 48134256 . - . gene_id "ENSG00000074966"; gene_version "10"; gene_name "TXK"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 48106081 48106188 . - . gene_id "ENSG00000200269"; gene_version "1"; gene_name "RNU6-838P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 48109353 48109410 . - . gene_id "ENSG00000283499"; gene_version "1"; gene_name "RF00026"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 48135783 48269864 . - . gene_id "ENSG00000135605"; gene_version "12"; gene_name "TEC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 48153434 48153535 . + . gene_id "ENSG00000202014"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 48341322 48426212 . + . gene_id "ENSG00000109171"; gene_version "14"; gene_name "SLAIN2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 48483343 48489196 . + . gene_id "ENSG00000145248"; gene_version "6"; gene_name "SLC10A4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 48490252 48494389 . + . gene_id "ENSG00000182223"; gene_version "7"; gene_name "ZAR1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 48497361 48780322 . - . gene_id "ENSG00000075539"; gene_version "14"; gene_name "FRYL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 48574453 48574520 . - . gene_id "ENSG00000251722"; gene_version "1"; gene_name "RNU5E-3P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 48805212 48861817 . + . gene_id "ENSG00000109180"; gene_version "14"; gene_name "OCIAD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 48852008 48860203 . - . gene_id "ENSG00000248256"; gene_version "1"; gene_name "OCIAD1-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 48885019 48906937 . - . gene_id "ENSG00000145247"; gene_version "11"; gene_name "OCIAD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 48932755 48932854 . - . gene_id "ENSG00000252913"; gene_version "1"; gene_name "RNU6-158P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 48936582 48936880 . + . gene_id "ENSG00000251334"; gene_version "2"; gene_name "AC020593.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 48986247 49062081 . + . gene_id "ENSG00000109182"; gene_version "11"; gene_name "CWH43"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 49016682 49017154 . - . gene_id "ENSG00000225455"; gene_version "3"; gene_name "TPI1P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49203171 49203726 . - . gene_id "ENSG00000249828"; gene_version "2"; gene_name "AC118282.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49212251 49212624 . - . gene_id "ENSG00000249079"; gene_version "1"; gene_name "AC118282.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49229573 49231284 . + . gene_id "ENSG00000280043"; gene_version "1"; gene_name "AC118282.4"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 49233289 49233965 . - . gene_id "ENSG00000250016"; gene_version "2"; gene_name "SNX18P23"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49238032 49245419 . - . gene_id "ENSG00000237961"; gene_version "4"; gene_name "AC118282.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49246021 49246538 . + . gene_id "ENSG00000268736"; gene_version "1"; gene_name "MTCO3P39"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49246601 49246915 . + . gene_id "ENSG00000248946"; gene_version "2"; gene_name "MTND3P22"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49486926 49489554 . - . gene_id "ENSG00000248583"; gene_version "1"; gene_name "AC119751.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 49502145 49506022 . - . gene_id "ENSG00000251056"; gene_version "1"; gene_name "ANKRD20A17P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 49507764 49508806 . - . gene_id "ENSG00000250769"; gene_version "2"; gene_name "AC119751.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49523648 49523857 . - . gene_id "ENSG00000248532"; gene_version "2"; gene_name "AC119751.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49524030 49524185 . - . gene_id "ENSG00000269848"; gene_version "1"; gene_name "AC119751.8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49548564 49548855 . - . gene_id "ENSG00000268967"; gene_version "1"; gene_name "AC119751.7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49548918 49549435 . - . gene_id "ENSG00000268391"; gene_version "1"; gene_name "MTCO3P42"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49550032 49557400 . + . gene_id "ENSG00000232471"; gene_version "3"; gene_name "AC119751.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 49561285 49561470 . - . gene_id "ENSG00000251630"; gene_version "1"; gene_name "AC119751.6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49561479 49562149 . + . gene_id "ENSG00000251539"; gene_version "1"; gene_name "SNX18P24"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49579833 49580189 . + . gene_id "ENSG00000250753"; gene_version "2"; gene_name "AC119751.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 49588772 49589529 . + . gene_id "ENSG00000249337"; gene_version "2"; gene_name "SNX18P25"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 51843000 51916837 . + . gene_id "ENSG00000109184"; gene_version "14"; gene_name "DCUN1D4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 51865050 51865535 . - . gene_id "ENSG00000250473"; gene_version "1"; gene_name "DUTP7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 51918772 51919381 . + . gene_id "ENSG00000272576"; gene_version "1"; gene_name "AC027271.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 51978079 51978372 . - . gene_id "ENSG00000243929"; gene_version "1"; gene_name "AC104784.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 51993702 52017620 . - . gene_id "ENSG00000188993"; gene_version "3"; gene_name "LRRC66"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 52020706 52038482 . - . gene_id "ENSG00000163069"; gene_version "12"; gene_name "SGCB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 52044805 52046954 . + . gene_id "ENSG00000251040"; gene_version "1"; gene_name "LINC02480"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 52051331 52097292 . + . gene_id "ENSG00000163071"; gene_version "10"; gene_name "SPATA18"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 52440494 52441535 . - . gene_id "ENSG00000251286"; gene_version "2"; gene_name "AC097522.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 52494849 52494952 . + . gene_id "ENSG00000199924"; gene_version "1"; gene_name "RNU6-1252P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 52590972 52659335 . - . gene_id "ENSG00000109189"; gene_version "12"; gene_name "USP46"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 52659406 52661668 . + . gene_id "ENSG00000248866"; gene_version "1"; gene_name "USP46-AS1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 52680609 52692649 . + . gene_id "ENSG00000260120"; gene_version "1"; gene_name "AC104066.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 52712404 52720351 . + . gene_id "ENSG00000226950"; gene_version "6"; gene_name "DANCR"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 mirbase gene 52712682 52712747 . + . gene_id "ENSG00000264585"; gene_version "1"; gene_name "MIR4449"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 52713249 52713370 . + . gene_id "ENSG00000212588"; gene_version "1"; gene_name "SNORA26"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 52720081 52720831 . - . gene_id "ENSG00000248375"; gene_version "1"; gene_name "AC104066.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 52722618 52751640 . - . gene_id "ENSG00000226887"; gene_version "7"; gene_name "ERVMER34-1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 52748137 52748259 . + . gene_id "ENSG00000212490"; gene_version "1"; gene_name "RF00568"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl gene 52786537 52786638 . + . gene_id "ENSG00000199901"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 52789994 52815464 . + . gene_id "ENSG00000250302"; gene_version "1"; gene_name "LINC01618"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 52862290 52866835 . + . gene_id "ENSG00000128045"; gene_version "6"; gene_name "RASL11B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 52872982 53366075 . - . gene_id "ENSG00000184178"; gene_version "15"; gene_name "SCFD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 52945649 52958087 . + . gene_id "ENSG00000248115"; gene_version "1"; gene_name "AC023154.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 53265461 53265567 . - . gene_id "ENSG00000207385"; gene_version "1"; gene_name "RNU6-310P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 53377643 53460861 . + . gene_id "ENSG00000145216"; gene_version "15"; gene_name "FIP1L1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 53377839 54295272 . + . gene_id "ENSG00000282278"; gene_version "1"; gene_name "AC058822.1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 53459301 53701405 . - . gene_id "ENSG00000072201"; gene_version "13"; gene_name "LNX1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 53496400 53549578 . + . gene_id "ENSG00000250930"; gene_version "5"; gene_name "LNX1-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 53575713 53576387 . + . gene_id "ENSG00000173966"; gene_version "7"; gene_name "AC095040.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 53592956 53604047 . + . gene_id "ENSG00000248494"; gene_version "1"; gene_name "LNX1-AS2"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 53659208 53737156 . + . gene_id "ENSG00000249341"; gene_version "1"; gene_name "AC124017.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 53899871 53916835 . + . gene_id "ENSG00000249706"; gene_version "1"; gene_name "AC105384.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 53927499 53928138 . - . gene_id "ENSG00000250815"; gene_version "1"; gene_name "AC105384.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 53986587 53987058 . - . gene_id "ENSG00000229585"; gene_version "4"; gene_name "RPL21P44"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 53997415 53997712 . - . gene_id "ENSG00000272650"; gene_version "1"; gene_name "AC110792.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 54009789 54064690 . - . gene_id "ENSG00000109220"; gene_version "10"; gene_name "CHIC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 54059597 54061210 . + . gene_id "ENSG00000269506"; gene_version "2"; gene_name "AC110792.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 54076625 54076848 . + . gene_id "ENSG00000251105"; gene_version "1"; gene_name "AC110792.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 54086926 54087783 . + . gene_id "ENSG00000250147"; gene_version "1"; gene_name "MORF4L2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 54099523 54102505 . + . gene_id "ENSG00000180613"; gene_version "10"; gene_name "GSX2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 54221126 54221472 . + . gene_id "ENSG00000242670"; gene_version "1"; gene_name "RPL22P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 54229097 54298247 . + . gene_id "ENSG00000134853"; gene_version "11"; gene_name "PDGFRA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 54332892 54355954 . + . gene_id "ENSG00000248184"; gene_version "1"; gene_name "LINC02283"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 54376002 54376752 . + . gene_id "ENSG00000248518"; gene_version "1"; gene_name "AC098587.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 54440502 54446723 . - . gene_id "ENSG00000251264"; gene_version "1"; gene_name "AC098868.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 54603211 54607131 . - . gene_id "ENSG00000250456"; gene_version "1"; gene_name "LINC02260"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 54657918 54740715 . + . gene_id "ENSG00000157404"; gene_version "15"; gene_name "KIT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 54836161 54845402 . - . gene_id "ENSG00000249727"; gene_version "1"; gene_name "AC097494.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 54845568 54859241 . + . gene_id "ENSG00000251256"; gene_version "1"; gene_name "LINC02358"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 54943630 54956818 . + . gene_id "ENSG00000248317"; gene_version "1"; gene_name "AC111194.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 54976159 54976371 . - . gene_id "ENSG00000244422"; gene_version "3"; gene_name "RPL38P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 55031965 55032071 . - . gene_id "ENSG00000252815"; gene_version "1"; gene_name "RNU6-410P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 55053060 55092534 . + . gene_id "ENSG00000250646"; gene_version "1"; gene_name "AC111194.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 55063738 55064026 . + . gene_id "ENSG00000244034"; gene_version "3"; gene_name "RN7SL424P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 55078259 55125595 . - . gene_id "ENSG00000128052"; gene_version "9"; gene_name "KDR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 55215624 55215919 . - . gene_id "ENSG00000239545"; gene_version "3"; gene_name "RN7SL822P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 55219344 55219973 . + . gene_id "ENSG00000250812"; gene_version "2"; gene_name "AC021220.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 55294490 55294598 . + . gene_id "ENSG00000206839"; gene_version "1"; gene_name "RNU6-746P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 55313011 55313924 . - . gene_id "ENSG00000250464"; gene_version "1"; gene_name "LRRC34P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 55346109 55373096 . + . gene_id "ENSG00000128039"; gene_version "10"; gene_name "SRD5A3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 55351812 55352408 . - . gene_id "ENSG00000251111"; gene_version "2"; gene_name "FCF1P8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 55363971 55395847 . - . gene_id "ENSG00000249700"; gene_version "8"; gene_name "SRD5A3-AS1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 55387949 55388271 . + . gene_id "ENSG00000273257"; gene_version "1"; gene_name "AC069200.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 55395957 55453397 . + . gene_id "ENSG00000134851"; gene_version "12"; gene_name "TMEM165"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 55412636 55412738 . + . gene_id "ENSG00000239040"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 55427903 55547138 . - . gene_id "ENSG00000134852"; gene_version "14"; gene_name "CLOCK"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 55501595 55501708 . - . gene_id "ENSG00000238585"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 55540502 55540835 . - . gene_id "ENSG00000223305"; gene_version "1"; gene_name "RN7SKP30"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 55547112 55547889 . + . gene_id "ENSG00000272969"; gene_version "1"; gene_name "AC024243.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 55556525 55592212 . - . gene_id "ENSG00000163440"; gene_version "11"; gene_name "PDCL2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 55595229 55636698 . - . gene_id "ENSG00000109255"; gene_version "11"; gene_name "NMU"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 55798636 55798731 . + . gene_id "ENSG00000251923"; gene_version "1"; gene_name "RNU6-276P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 55819819 55837487 . + . gene_id "ENSG00000250821"; gene_version "2"; gene_name "EXOC1L"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 55853616 55905034 . + . gene_id "ENSG00000090989"; gene_version "17"; gene_name "EXOC1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 55885595 55885701 . + . gene_id "ENSG00000202358"; gene_version "1"; gene_name "RNU6-652P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 55948871 56033363 . + . gene_id "ENSG00000174799"; gene_version "10"; gene_name "CEP135"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 56049073 56328625 . + . gene_id "ENSG00000109265"; gene_version "14"; gene_name "KIAA1211"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 56097390 56097504 . + . gene_id "ENSG00000200741"; gene_version "1"; gene_name "RNA5SP161"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl gene 56288485 56288584 . - . gene_id "ENSG00000252489"; gene_version "1"; gene_name "RNU6-197P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 56320719 56321334 . - . gene_id "ENSG00000250324"; gene_version "2"; gene_name "MRPL22P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 56338287 56387508 . - . gene_id "ENSG00000157426"; gene_version "13"; gene_name "AASDH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 56356135 56356932 . + . gene_id "ENSG00000242083"; gene_version "2"; gene_name "RPL7AP31"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 56387625 56388153 . + . gene_id "ENSG00000269921"; gene_version "1"; gene_name "AC068620.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 56393362 56435615 . - . gene_id "ENSG00000128059"; gene_version "8"; gene_name "PPAT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 56396312 56396871 . + . gene_id "ENSG00000270147"; gene_version "1"; gene_name "AC068620.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 56410516 56431548 . + . gene_id "ENSG00000283156"; gene_version "1"; gene_name "AC068620.3"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 ensembl_havana gene 56435741 56464579 . + . gene_id "ENSG00000128050"; gene_version "8"; gene_name "PAICS"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 56467336 56503681 . + . gene_id "ENSG00000174780"; gene_version "16"; gene_name "SRP72"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 56505209 56525481 . + . gene_id "ENSG00000196503"; gene_version "4"; gene_name "ARL9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 56530609 56603507 . + . gene_id "ENSG00000249693"; gene_version "2"; gene_name "THEGL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 56593004 56595681 . + . gene_id "ENSG00000248590"; gene_version "2"; gene_name "GLDCP1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 56647988 56681899 . - . gene_id "ENSG00000171476"; gene_version "21"; gene_name "HOPX"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 56662469 56665694 . - . gene_id "ENSG00000280285"; gene_version "1"; gene_name "AC108215.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 56710060 56710614 . + . gene_id "ENSG00000241250"; gene_version "1"; gene_name "RPL17P20"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 56760919 56761485 . - . gene_id "ENSG00000227040"; gene_version "4"; gene_name "AC022483.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 56794348 56794642 . - . gene_id "ENSG00000240545"; gene_version "3"; gene_name "RN7SL492P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 56805834 56806131 . + . gene_id "ENSG00000265894"; gene_version "2"; gene_name "RN7SL357P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 56809860 56821742 . - . gene_id "ENSG00000128040"; gene_version "10"; gene_name "SPINK2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 56810422 56810681 . + . gene_id "ENSG00000278226"; gene_version "1"; gene_name "RF00017"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 56818218 56818314 . - . gene_id "ENSG00000251799"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 56907876 56966678 . + . gene_id "ENSG00000084093"; gene_version "16"; gene_name "REST"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 56960927 56961373 . - . gene_id "ENSG00000269949"; gene_version "1"; gene_name "AC069307.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 56963370 56978823 . - . gene_id "ENSG00000084092"; gene_version "6"; gene_name "NOA1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 56977722 57031168 . + . gene_id "ENSG00000047315"; gene_version "15"; gene_name "POLR2B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 57002692 57002792 . + . gene_id "ENSG00000251703"; gene_version "1"; gene_name "RNU6-998P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 57030773 57110385 . - . gene_id "ENSG00000163453"; gene_version "11"; gene_name "IGFBP7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 57072683 57073132 . + . gene_id "ENSG00000250384"; gene_version "1"; gene_name "UBE2CP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 57109762 57205510 . + . gene_id "ENSG00000245067"; gene_version "6"; gene_name "IGFBP7-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 57154577 57156452 . + . gene_id "ENSG00000250192"; gene_version "1"; gene_name "AC105390.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 57352999 57353329 . - . gene_id "ENSG00000243920"; gene_version "2"; gene_name "RPS26P24"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 57425872 57465986 . + . gene_id "ENSG00000248505"; gene_version "1"; gene_name "LINC02380"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 57491390 57495233 . + . gene_id "ENSG00000251459"; gene_version "1"; gene_name "AC013724.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 57595940 57605872 . - . gene_id "ENSG00000251049"; gene_version "2"; gene_name "AC107396.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 57605694 57658800 . - . gene_id "ENSG00000250333"; gene_version "1"; gene_name "AC093725.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 57720035 57724655 . + . gene_id "ENSG00000249831"; gene_version "2"; gene_name "AC093725.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 58103147 58103434 . + . gene_id "ENSG00000248660"; gene_version "1"; gene_name "SRIP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 58117758 58118070 . - . gene_id "ENSG00000249105"; gene_version "2"; gene_name "AC096725.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 58524515 58536328 . - . gene_id "ENSG00000250340"; gene_version "1"; gene_name "LINC02494"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 58562165 58565122 . - . gene_id "ENSG00000250078"; gene_version "1"; gene_name "AC019133.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 58780626 58984152 . - . gene_id "ENSG00000251339"; gene_version "5"; gene_name "AC017091.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 58984282 59046959 . + . gene_id "ENSG00000251266"; gene_version "1"; gene_name "LINC02429"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 58987182 58988160 . - . gene_id "ENSG00000249382"; gene_version "2"; gene_name "AC097501.1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 59047020 59075256 . - . gene_id "ENSG00000250375"; gene_version "2"; gene_name "AC097501.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 59152834 59176146 . + . gene_id "ENSG00000249111"; gene_version "1"; gene_name "AC108517.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 59533786 59533898 . + . gene_id "ENSG00000199780"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 59551142 59630324 . - . gene_id "ENSG00000249392"; gene_version "1"; gene_name "AC096588.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 59767816 59792114 . - . gene_id "ENSG00000249892"; gene_version "1"; gene_name "AC093857.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 59833175 59833276 . + . gene_id "ENSG00000201676"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 59834063 59834167 . + . gene_id "ENSG00000201775"; gene_version "1"; gene_name "RNU6-1325P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 60038269 60038586 . + . gene_id "ENSG00000283043"; gene_version "1"; gene_name "AC097655.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 60750586 60789999 . + . gene_id "ENSG00000249066"; gene_version "1"; gene_name "LINC02496"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 60784115 60784696 . + . gene_id "ENSG00000248237"; gene_version "2"; gene_name "AC105420.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 60922619 60922684 . + . gene_id "ENSG00000265829"; gene_version "1"; gene_name "MIR548AG1"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 61143656 61153962 . + . gene_id "ENSG00000240152"; gene_version "2"; gene_name "LINC02271"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 61201258 62078335 . + . gene_id "ENSG00000150471"; gene_version "16"; gene_name "ADGRL3"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 61211652 61212203 . + . gene_id "ENSG00000241261"; gene_version "1"; gene_name "RPL17P19"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 61420246 61428221 . - . gene_id "ENSG00000205682"; gene_version "2"; gene_name "AC020741.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 61775449 61775850 . - . gene_id "ENSG00000226439"; gene_version "3"; gene_name "AC108161.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 61906313 61906408 . + . gene_id "ENSG00000202169"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 62071752 62165554 . - . gene_id "ENSG00000248692"; gene_version "5"; gene_name "ADGRL3-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 62105660 62106049 . - . gene_id "ENSG00000225405"; gene_version "3"; gene_name "RPS15AP17"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 62248294 62248770 . + . gene_id "ENSG00000241344"; gene_version "1"; gene_name "RPL21P47"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 62291562 62292337 . + . gene_id "ENSG00000250249"; gene_version "2"; gene_name "AC105313.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 62489495 62490218 . - . gene_id "ENSG00000248847"; gene_version "2"; gene_name "AC074087.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 62510469 62510771 . + . gene_id "ENSG00000248336"; gene_version "1"; gene_name "HMGN1P11"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 62816826 62818794 . + . gene_id "ENSG00000180673"; gene_version "9"; gene_name "EXOC5P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 63128311 63143881 . + . gene_id "ENSG00000251055"; gene_version "2"; gene_name "AC097491.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 63350114 63351472 . + . gene_id "ENSG00000231442"; gene_version "3"; gene_name "LARP1BP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 63468701 63494278 . - . gene_id "ENSG00000250775"; gene_version "1"; gene_name "AC093730.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 64275257 64409468 . - . gene_id "ENSG00000205678"; gene_version "7"; gene_name "TECRL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 64397694 64397787 . - . gene_id "ENSG00000252104"; gene_version "1"; gene_name "RNU6-191P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 64430909 64433215 . + . gene_id "ENSG00000250768"; gene_version "1"; gene_name "DPP3P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 64606418 64606613 . + . gene_id "ENSG00000251430"; gene_version "1"; gene_name "MTCO3P27"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 64607703 64608831 . - . gene_id "ENSG00000251385"; gene_version "2"; gene_name "MTCYBP16"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 64608905 64609424 . + . gene_id "ENSG00000249893"; gene_version "1"; gene_name "MTND6P16"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 64609454 64610532 . - . gene_id "ENSG00000250169"; gene_version "1"; gene_name "MTND5P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 64610616 64610909 . - . gene_id "ENSG00000248259"; gene_version "1"; gene_name "MTND4LP31"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 64610980 64611308 . - . gene_id "ENSG00000249045"; gene_version "1"; gene_name "MTND3P24"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 64611374 64611888 . - . gene_id "ENSG00000248328"; gene_version "1"; gene_name "MTCO3P28"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 64767130 64767897 . - . gene_id "ENSG00000244669"; gene_version "1"; gene_name "AC104689.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 64914281 65024485 . - . gene_id "ENSG00000250125"; gene_version "2"; gene_name "LINC02232"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 65034634 65036017 . - . gene_id "ENSG00000248447"; gene_version "2"; gene_name "AC107058.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 65142703 65145763 . - . gene_id "ENSG00000248998"; gene_version "2"; gene_name "EFL1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 65216616 65217433 . + . gene_id "ENSG00000249351"; gene_version "2"; gene_name "AC096754.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 65225867 65241814 . - . gene_id "ENSG00000285711"; gene_version "1"; gene_name "AC018683.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 65319563 65670495 . - . gene_id "ENSG00000145242"; gene_version "13"; gene_name "EPHA5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 65573459 65574328 . + . gene_id "ENSG00000243199"; gene_version "1"; gene_name "AC115223.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 65669961 65698029 . + . gene_id "ENSG00000250846"; gene_version "6"; gene_name "EPHA5-AS1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 65702202 65705553 . + . gene_id "ENSG00000248479"; gene_version "1"; gene_name "AC104137.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 65807240 65807435 . - . gene_id "ENSG00000222765"; gene_version "1"; gene_name "RNU2-40P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 65858761 65860204 . + . gene_id "ENSG00000251527"; gene_version "1"; gene_name "AC097110.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 65998846 66150012 . + . gene_id "ENSG00000249413"; gene_version "2"; gene_name "AC116049.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 66003281 66016792 . + . gene_id "ENSG00000272304"; gene_version "1"; gene_name "AC096721.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 66094142 66094526 . + . gene_id "ENSG00000236562"; gene_version "4"; gene_name "AC116049.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 66276824 66276928 . + . gene_id "ENSG00000221563"; gene_version "1"; gene_name "MIR1269A"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 66431092 66431521 . + . gene_id "ENSG00000244099"; gene_version "1"; gene_name "RPS23P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 66897262 66897371 . + . gene_id "ENSG00000252890"; gene_version "1"; gene_name "RNU6-699P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 67417305 67468251 . - . gene_id "ENSG00000250075"; gene_version "5"; gene_name "AC104806.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 67429591 67429754 . - . gene_id "ENSG00000206629"; gene_version "1"; gene_name "RNU1-63P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 67439992 67440118 . + . gene_id "ENSG00000274759"; gene_version "1"; gene_name "RNA5SP527"; gene_source "ensembl"; gene_biotype "rRNA"; -chr4 havana gene 67446267 67446574 . + . gene_id "ENSG00000250030"; gene_version "2"; gene_name "AC104806.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 67468748 67545606 . - . gene_id "ENSG00000145241"; gene_version "10"; gene_name "CENPC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 67558728 67607337 . + . gene_id "ENSG00000035720"; gene_version "7"; gene_name "STAP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 67607856 67610313 . - . gene_id "ENSG00000279464"; gene_version "1"; gene_name "AC096720.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 67612652 67701179 . - . gene_id "ENSG00000033178"; gene_version "12"; gene_name "UBA6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 67638177 67638359 . + . gene_id "ENSG00000270257"; gene_version "1"; gene_name "AC096720.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 67701280 68080952 . + . gene_id "ENSG00000248049"; gene_version "6"; gene_name "UBA6-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 67716375 67717388 . - . gene_id "ENSG00000250656"; gene_version "2"; gene_name "ST3GAL1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 67718996 67724262 . - . gene_id "ENSG00000270228"; gene_version "1"; gene_name "AC079880.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 67725183 67726395 . - . gene_id "ENSG00000270292"; gene_version "1"; gene_name "AC079880.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 67739328 67754360 . - . gene_id "ENSG00000109163"; gene_version "6"; gene_name "GNRHR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 67747236 67747386 . + . gene_id "ENSG00000202374"; gene_version "1"; gene_name "RF00091"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 67766480 67773854 . - . gene_id "ENSG00000232398"; gene_version "1"; gene_name "TMPRSS11CP"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 67820876 67884032 . - . gene_id "ENSG00000153802"; gene_version "11"; gene_name "TMPRSS11D"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 67909385 67964140 . - . gene_id "ENSG00000187054"; gene_version "15"; gene_name "TMPRSS11A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 67991684 68015768 . - . gene_id "ENSG00000229009"; gene_version "7"; gene_name "TMPRSS11GP"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 ensembl gene 68003895 68004001 . + . gene_id "ENSG00000207428"; gene_version "1"; gene_name "RNU6-95P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 68038544 68039647 . + . gene_id "ENSG00000227725"; gene_version "3"; gene_name "GCOM2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 68049706 68050478 . - . gene_id "ENSG00000283131"; gene_version "1"; gene_name "MTND2P41"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 68053198 68129880 . - . gene_id "ENSG00000198092"; gene_version "5"; gene_name "TMPRSS11F"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68061822 68063269 . - . gene_id "ENSG00000215127"; gene_version "6"; gene_name "SYT14P1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 68182292 68212470 . + . gene_id "ENSG00000250426"; gene_version "2"; gene_name "FTLP10"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 68184081 68218080 . - . gene_id "ENSG00000250026"; gene_version "5"; gene_name "TMPRSS11BNL"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 ensembl_havana gene 68226653 68245720 . - . gene_id "ENSG00000185873"; gene_version "7"; gene_name "TMPRSS11B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68282461 68285959 . - . gene_id "ENSG00000250642"; gene_version "3"; gene_name "AC098799.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68293127 68294364 . + . gene_id "ENSG00000248639"; gene_version "2"; gene_name "AC098799.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 68300325 68302459 . + . gene_id "ENSG00000249531"; gene_version "2"; gene_name "AC098799.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 68304343 68304939 . - . gene_id "ENSG00000248122"; gene_version "1"; gene_name "APOOP4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 68310387 68350089 . - . gene_id "ENSG00000083896"; gene_version "12"; gene_name "YTHDC1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68376323 68376505 . + . gene_id "ENSG00000162840"; gene_version "4"; gene_name "MT2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 68447449 68497604 . + . gene_id "ENSG00000087128"; gene_version "9"; gene_name "TMPRSS11E"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68509441 68517647 . - . gene_id "ENSG00000250566"; gene_version "1"; gene_name "UGT2B29P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 68537184 68568527 . - . gene_id "ENSG00000197888"; gene_version "2"; gene_name "UGT2B17"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68614419 68615013 . + . gene_id "ENSG00000249472"; gene_version "1"; gene_name "AC147055.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 68615393 68616137 . - . gene_id "ENSG00000251101"; gene_version "1"; gene_name "AC147055.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 68626847 68628899 . - . gene_id "ENSG00000251074"; gene_version "1"; gene_name "AC147055.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 68646630 68670628 . - . gene_id "ENSG00000196620"; gene_version "9"; gene_name "UGT2B15"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68704600 68712498 . - . gene_id "ENSG00000248635"; gene_version "1"; gene_name "AC147055.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68784618 68787474 . + . gene_id "ENSG00000250376"; gene_version "1"; gene_name "AC093720.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68813995 68814727 . + . gene_id "ENSG00000251236"; gene_version "1"; gene_name "AC021146.8"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 68815993 68831196 . + . gene_id "ENSG00000109181"; gene_version "11"; gene_name "UGT2B10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68834213 68834368 . - . gene_id "ENSG00000251424"; gene_version "1"; gene_name "AC021146.9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68861332 68861610 . - . gene_id "ENSG00000249235"; gene_version "1"; gene_name "AC021146.4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68877626 68880131 . - . gene_id "ENSG00000251529"; gene_version "1"; gene_name "AC021146.11"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68883885 68884440 . - . gene_id "ENSG00000248547"; gene_version "2"; gene_name "AC021146.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 68900651 68900910 . - . gene_id "ENSG00000248613"; gene_version "1"; gene_name "AC021146.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68901008 68906983 . - . gene_id "ENSG00000272626"; gene_version "1"; gene_name "AC021146.12"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 68907918 68908034 . - . gene_id "ENSG00000249985"; gene_version "1"; gene_name "AC021146.6"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68914928 68924741 . - . gene_id "ENSG00000198277"; gene_version "6"; gene_name "AC021146.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 68928463 68951791 . - . gene_id "ENSG00000135220"; gene_version "10"; gene_name "UGT2A3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 68972999 68975993 . - . gene_id "ENSG00000251498"; gene_version "1"; gene_name "AC021146.10"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68985009 68988533 . - . gene_id "ENSG00000249735"; gene_version "1"; gene_name "AC021146.5"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 68996935 68997709 . - . gene_id "ENSG00000250277"; gene_version "2"; gene_name "AC021146.7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 69004862 69020414 . - . gene_id "ENSG00000251685"; gene_version "3"; gene_name "UGT2B27P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69021656 69022340 . - . gene_id "ENSG00000249890"; gene_version "1"; gene_name "AC107401.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69027831 69044578 . + . gene_id "ENSG00000250919"; gene_version "1"; gene_name "UGT2B26P"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 69051363 69112987 . + . gene_id "ENSG00000171234"; gene_version "13"; gene_name "UGT2B7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 69066395 69069888 . + . gene_id "ENSG00000248763"; gene_version "2"; gene_name "AC111000.2"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69125274 69126451 . + . gene_id "ENSG00000251284"; gene_version "2"; gene_name "AC111000.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 69131351 69134814 . + . gene_id "ENSG00000250100"; gene_version "2"; gene_name "AC111000.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69144734 69147671 . + . gene_id "ENSG00000251427"; gene_version "1"; gene_name "AC111000.6"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69181660 69182372 . + . gene_id "ENSG00000196472"; gene_version "4"; gene_name "AC111000.1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 69182100 69216766 . + . gene_id "ENSG00000250696"; gene_version "5"; gene_name "AC111000.4"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 69199951 69214731 . - . gene_id "ENSG00000213759"; gene_version "9"; gene_name "UGT2B11"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 69215908 69216635 . - . gene_id "ENSG00000268803"; gene_version "1"; gene_name "AC114797.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69242628 69250815 . + . gene_id "ENSG00000249763"; gene_version "1"; gene_name "AC114786.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 69280499 69295050 . + . gene_id "ENSG00000135226"; gene_version "17"; gene_name "UGT2B28"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 69306469 69307173 . - . gene_id "ENSG00000251691"; gene_version "2"; gene_name "AC114786.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69346609 69358177 . + . gene_id "ENSG00000250612"; gene_version "2"; gene_name "AC114786.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 69387580 69388307 . + . gene_id "ENSG00000268209"; gene_version "1"; gene_name "AC114786.4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69389492 69402081 . + . gene_id "ENSG00000215110"; gene_version "7"; gene_name "UGT2B25P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 69406931 69407655 . + . gene_id "ENSG00000248824"; gene_version "2"; gene_name "AC108078.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69408828 69423164 . + . gene_id "ENSG00000249956"; gene_version "4"; gene_name "UGT2B24P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 69437357 69441050 . + . gene_id "ENSG00000250828"; gene_version "2"; gene_name "AC108078.3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69450014 69451613 . + . gene_id "ENSG00000249686"; gene_version "1"; gene_name "AC108078.2"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 69480165 69526014 . - . gene_id "ENSG00000156096"; gene_version "13"; gene_name "UGT2B4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 69517667 69518400 . - . gene_id "ENSG00000248886"; gene_version "2"; gene_name "UGT2A3P7"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 69572391 69585527 . - . gene_id "ENSG00000251177"; gene_version "2"; gene_name "AC093829.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 69588417 69653249 . - . gene_id "ENSG00000173610"; gene_version "12"; gene_name "UGT2A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 69589309 69639642 . - . gene_id "ENSG00000271271"; gene_version "5"; gene_name "UGT2A2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 69721162 69787961 . - . gene_id "ENSG00000173597"; gene_version "8"; gene_name "SULT1B1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 69791872 69813888 . - . gene_id "ENSG00000236959"; gene_version "1"; gene_name "SULT1D1P"; gene_source "havana"; gene_biotype "transcribed_unitary_pseudogene"; -chr4 havana gene 69810780 69847786 . - . gene_id "ENSG00000284695"; gene_version "1"; gene_name "AC108941.2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 69841212 69860152 . - . gene_id "ENSG00000109193"; gene_version "11"; gene_name "SULT1E1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 69888877 69889406 . + . gene_id "ENSG00000251489"; gene_version "2"; gene_name "AC108941.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 69931081 69946574 . + . gene_id "ENSG00000126545"; gene_version "13"; gene_name "CSN1S1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 69955256 69961007 . - . gene_id "ENSG00000135222"; gene_version "6"; gene_name "CSN2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 69995930 70002570 . + . gene_id "ENSG00000126549"; gene_version "9"; gene_name "STATH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70028413 70036538 . + . gene_id "ENSG00000205649"; gene_version "7"; gene_name "HTN3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70050402 70058845 . + . gene_id "ENSG00000126550"; gene_version "8"; gene_name "HTN1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 70067386 70085290 . + . gene_id "ENSG00000234124"; gene_version "6"; gene_name "CSN1S2AP"; gene_source "havana"; gene_biotype "transcribed_unitary_pseudogene"; -chr4 ensembl_havana gene 70133616 70176799 . + . gene_id "ENSG00000187533"; gene_version "13"; gene_name "PRR27"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70196496 70204576 . + . gene_id "ENSG00000109205"; gene_version "16"; gene_name "ODAM"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70226071 70235252 . + . gene_id "ENSG00000181617"; gene_version "5"; gene_name "FDCSP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70242588 70251428 . + . gene_id "ENSG00000171209"; gene_version "3"; gene_name "CSN3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70334966 70337116 . + . gene_id "ENSG00000145309"; gene_version "5"; gene_name "CABS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70360761 70367158 . + . gene_id "ENSG00000109208"; gene_version "4"; gene_name "SMR3A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70370093 70390244 . + . gene_id "ENSG00000171201"; gene_version "10"; gene_name "SMR3B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70397882 70410194 . + . gene_id "ENSG00000171199"; gene_version "10"; gene_name "OPRPN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70430492 70482997 . + . gene_id "ENSG00000171195"; gene_version "10"; gene_name "MUC7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70518540 70532742 . + . gene_id "ENSG00000187689"; gene_version "9"; gene_name "AMTN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70592256 70607288 . + . gene_id "ENSG00000178522"; gene_version "14"; gene_name "AMBN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70628744 70686816 . + . gene_id "ENSG00000132464"; gene_version "11"; gene_name "ENAM"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70655541 70681817 . - . gene_id "ENSG00000132465"; gene_version "10"; gene_name "JCHAIN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70688479 70690551 . + . gene_id "ENSG00000132467"; gene_version "3"; gene_name "UTP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 70701755 70701858 . + . gene_id "ENSG00000207448"; gene_version "1"; gene_name "RNU6-520P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 70703018 70703123 . - . gene_id "ENSG00000207058"; gene_version "1"; gene_name "RNU6-784P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 70703747 70704491 . - . gene_id "ENSG00000272986"; gene_version "1"; gene_name "AC009570.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 70704204 70807315 . + . gene_id "ENSG00000018189"; gene_version "12"; gene_name "RUFY3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70815782 70839945 . - . gene_id "ENSG00000132463"; gene_version "13"; gene_name "GRSF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 70848136 70848218 . - . gene_id "ENSG00000283313"; gene_version "1"; gene_name "RF00026"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 70852130 70852240 . + . gene_id "ENSG00000207007"; gene_version "1"; gene_name "RNU6-891P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 70902326 71022449 . + . gene_id "ENSG00000173542"; gene_version "8"; gene_name "MOB1B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 70992538 71030914 . + . gene_id "ENSG00000156136"; gene_version "9"; gene_name "DCK"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 71062667 71572087 . + . gene_id "ENSG00000080493"; gene_version "16"; gene_name "SLC4A4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 71300258 71301235 . - . gene_id "ENSG00000249170"; gene_version "1"; gene_name "AC096713.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 71434405 71437924 . - . gene_id "ENSG00000270098"; gene_version "1"; gene_name "LDHAL6EP"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 71741693 71804041 . - . gene_id "ENSG00000145321"; gene_version "12"; gene_name "GC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 71759518 71759616 . - . gene_id "ENSG00000222236"; gene_version "1"; gene_name "RNA5SP163"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 71821305 71823980 . - . gene_id "ENSG00000248567"; gene_version "1"; gene_name "AC068721.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 72031804 72148067 . + . gene_id "ENSG00000056291"; gene_version "17"; gene_name "NPFFR2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 72280969 72569386 . - . gene_id "ENSG00000156140"; gene_version "9"; gene_name "ADAMTS3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 72323028 72330751 . + . gene_id "ENSG00000250877"; gene_version "1"; gene_name "AC095056.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 72807267 72808192 . + . gene_id "ENSG00000270665"; gene_version "1"; gene_name "HNRNPA1P67"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 72965178 72965303 . + . gene_id "ENSG00000252955"; gene_version "1"; gene_name "RNU4ATAC9P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 73026748 73026873 . + . gene_id "ENSG00000210839"; gene_version "1"; gene_name "RNU6ATAC5P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 73052362 73069755 . - . gene_id "ENSG00000163626"; gene_version "16"; gene_name "COX18"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 73073376 73258798 . - . gene_id "ENSG00000132466"; gene_version "18"; gene_name "ANKRD17"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 73098822 73099145 . + . gene_id "ENSG00000248641"; gene_version "1"; gene_name "HMGA1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 73259209 73317953 . + . gene_id "ENSG00000250220"; gene_version "1"; gene_name "AC053527.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 73263960 73264084 . + . gene_id "ENSG00000221639"; gene_version "1"; gene_name "RF00334"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 73337233 73337771 . - . gene_id "ENSG00000249976"; gene_version "2"; gene_name "AC108157.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 73397114 73421412 . + . gene_id "ENSG00000163631"; gene_version "16"; gene_name "ALB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 73431138 73456174 . + . gene_id "ENSG00000081051"; gene_version "7"; gene_name "AFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 73481683 73504001 . + . gene_id "ENSG00000079557"; gene_version "4"; gene_name "AFM"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 73508803 73534128 . + . gene_id "ENSG00000250436"; gene_version "1"; gene_name "LINC02499"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 73543822 73544013 . + . gene_id "ENSG00000249970"; gene_version "1"; gene_name "AC074250.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 73571550 73620631 . - . gene_id "ENSG00000169435"; gene_version "13"; gene_name "RASSF6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 73710302 73714527 . + . gene_id "ENSG00000228277"; gene_version "1"; gene_name "AC112518.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 73740506 73743716 . + . gene_id "ENSG00000169429"; gene_version "10"; gene_name "CXCL8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 73777636 73778060 . - . gene_id "ENSG00000249051"; gene_version "2"; gene_name "AC112518.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 73836497 73849064 . + . gene_id "ENSG00000124875"; gene_version "9"; gene_name "CXCL6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 73847866 73848829 . + . gene_id "ENSG00000250550"; gene_version "3"; gene_name "PPBPP1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 ensembl_havana gene 73853189 73854155 . + . gene_id "ENSG00000109272"; gene_version "3"; gene_name "PF4V1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 73869393 73871242 . + . gene_id "ENSG00000163739"; gene_version "4"; gene_name "CXCL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 73938604 73939558 . - . gene_id "ENSG00000249920"; gene_version "2"; gene_name "HNRNPA1P55"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 73944011 73944324 . - . gene_id "ENSG00000250339"; gene_version "2"; gene_name "CXCL1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 73981077 73982124 . - . gene_id "ENSG00000163737"; gene_version "3"; gene_name "PF4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 73987038 73988197 . - . gene_id "ENSG00000163736"; gene_version "3"; gene_name "PPBP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 73995642 73998779 . - . gene_id "ENSG00000163735"; gene_version "6"; gene_name "CXCL5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 74011578 74011876 . + . gene_id "ENSG00000244194"; gene_version "3"; gene_name "RN7SL218P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 74036589 74038807 . - . gene_id "ENSG00000163734"; gene_version "4"; gene_name "CXCL3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 74054038 74055399 . - . gene_id "ENSG00000248848"; gene_version "1"; gene_name "PPBPP2"; gene_source "ensembl_havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 74085995 74086672 . - . gene_id "ENSG00000251017"; gene_version "1"; gene_name "AC093677.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 74097035 74099293 . - . gene_id "ENSG00000081041"; gene_version "8"; gene_name "CXCL2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 74114174 74303099 . + . gene_id "ENSG00000163738"; gene_version "18"; gene_name "MTHFD2L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 74156511 74158373 . - . gene_id "ENSG00000269559"; gene_version "2"; gene_name "AC093677.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 74308473 74315307 . + . gene_id "ENSG00000182585"; gene_version "9"; gene_name "EPGN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 74365143 74388751 . + . gene_id "ENSG00000124882"; gene_version "3"; gene_name "EREG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 74418917 74440457 . - . gene_id "ENSG00000250532"; gene_version "1"; gene_name "AC021180.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 74445134 74455009 . + . gene_id "ENSG00000109321"; gene_version "10"; gene_name "AREG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 74552584 74589481 . - . gene_id "ENSG00000249942"; gene_version "1"; gene_name "AC239584.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 74744759 74794686 . - . gene_id "ENSG00000174808"; gene_version "11"; gene_name "BTC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 74917822 74918138 . + . gene_id "ENSG00000250356"; gene_version "1"; gene_name "HSPE1P23"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 74933095 75050115 . + . gene_id "ENSG00000169116"; gene_version "11"; gene_name "PARM1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 74955974 74970362 . - . gene_id "ENSG00000249717"; gene_version "1"; gene_name "AC110760.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 74993877 75034824 . - . gene_id "ENSG00000248165"; gene_version "1"; gene_name "AC110760.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 75081702 75084717 . - . gene_id "ENSG00000260265"; gene_version "1"; gene_name "LINC02562"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 75101477 75101943 . + . gene_id "ENSG00000250315"; gene_version "2"; gene_name "AC110760.3"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 75194867 75195079 . + . gene_id "ENSG00000250560"; gene_version "2"; gene_name "AC093870.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 75269068 75361182 . - . gene_id "ENSG00000251185"; gene_version "1"; gene_name "AC025244.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 75341279 75359024 . - . gene_id "ENSG00000251454"; gene_version "1"; gene_name "AC025244.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 75354076 75362566 . + . gene_id "ENSG00000251383"; gene_version "1"; gene_name "LINC02483"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 75361207 75434449 . - . gene_id "ENSG00000248646"; gene_version "1"; gene_name "AC096759.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 75401195 75423023 . + . gene_id "ENSG00000250735"; gene_version "5"; gene_name "AC096759.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 75479037 75514764 . - . gene_id "ENSG00000163743"; gene_version "13"; gene_name "RCHY1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 75513946 75550473 . + . gene_id "ENSG00000174796"; gene_version "12"; gene_name "THAP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 75556048 75565885 . + . gene_id "ENSG00000174792"; gene_version "10"; gene_name "ODAPH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 75578005 75630716 . - . gene_id "ENSG00000138769"; gene_version "10"; gene_name "CDKL2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 75642782 75724525 . - . gene_id "ENSG00000138757"; gene_version "14"; gene_name "G3BP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 75662120 75662213 . - . gene_id "ENSG00000201644"; gene_version "2"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 75724593 75814286 . + . gene_id "ENSG00000138768"; gene_version "14"; gene_name "USO1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 75829454 75829589 . - . gene_id "ENSG00000222644"; gene_version "1"; gene_name "RNU2-16P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 75830751 75832705 . + . gene_id "ENSG00000229717"; gene_version "2"; gene_name "AC110615.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 75859864 75902571 . - . gene_id "ENSG00000156194"; gene_version "17"; gene_name "PPEF2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 75913657 75941051 . - . gene_id "ENSG00000138744"; gene_version "14"; gene_name "NAAA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 75940950 75990962 . - . gene_id "ENSG00000198301"; gene_version "11"; gene_name "SDAD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 75980790 76005942 . + . gene_id "ENSG00000245928"; gene_version "2"; gene_name "AC112719.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 76001275 76007488 . - . gene_id "ENSG00000138755"; gene_version "5"; gene_name "CXCL9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76011184 76112802 . + . gene_id "ENSG00000156219"; gene_version "16"; gene_name "ART3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76021117 76023497 . - . gene_id "ENSG00000169245"; gene_version "5"; gene_name "CXCL10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76033682 76041415 . - . gene_id "ENSG00000169248"; gene_version "12"; gene_name "CXCL11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 76036750 76037064 . - . gene_id "ENSG00000225846"; gene_version "4"; gene_name "AC112719.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 76114659 76148515 . - . gene_id "ENSG00000138750"; gene_version "14"; gene_name "NUP54"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76158733 76234536 . - . gene_id "ENSG00000138760"; gene_version "9"; gene_name "SCARB2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76214040 76283780 . + . gene_id "ENSG00000189157"; gene_version "13"; gene_name "FAM47E"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76251721 76311129 . + . gene_id "ENSG00000272414"; gene_version "5"; gene_name "FAM47E-STBD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76306026 76311599 . + . gene_id "ENSG00000118804"; gene_version "8"; gene_name "STBD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76312997 76421868 . - . gene_id "ENSG00000163749"; gene_version "17"; gene_name "CCDC158"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 76344550 76345590 . + . gene_id "ENSG00000249858"; gene_version "2"; gene_name "SNX5P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 76356610 76356715 . - . gene_id "ENSG00000212368"; gene_version "1"; gene_name "RNU6-1000P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 76401251 76401569 . + . gene_id "ENSG00000240426"; gene_version "1"; gene_name "AC096743.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 76402076 76402146 . + . gene_id "ENSG00000199857"; gene_version "1"; gene_name "RF00278"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 76435100 76783253 . + . gene_id "ENSG00000138771"; gene_version "15"; gene_name "SHROOM3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 76509284 76509719 . - . gene_id "ENSG00000249278"; gene_version "1"; gene_name "AC112249.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 76532222 76532327 . - . gene_id "ENSG00000207307"; gene_version "1"; gene_name "RNU6-145P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 mirbase gene 76573568 76573632 . + . gene_id "ENSG00000263445"; gene_version "1"; gene_name "MIR4450"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 76575551 76575626 . + . gene_id "ENSG00000283682"; gene_version "1"; gene_name "MIR548AH"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 76756960 76758474 . - . gene_id "ENSG00000233860"; gene_version "1"; gene_name "AC107072.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 76758554 76801964 . - . gene_id "ENSG00000224218"; gene_version "1"; gene_name "AC107072.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 76886029 76886370 . - . gene_id "ENSG00000270244"; gene_version "1"; gene_name "AC104687.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 76891034 76891445 . + . gene_id "ENSG00000242727"; gene_version "2"; gene_name "AC104687.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 76894928 76898147 . - . gene_id "ENSG00000186212"; gene_version "3"; gene_name "SOWAHB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 76949703 77040384 . + . gene_id "ENSG00000138758"; gene_version "11"; gene_name "SEPT11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 76958860 76959169 . - . gene_id "ENSG00000234036"; gene_version "4"; gene_name "TXNP6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 77047158 77076005 . - . gene_id "ENSG00000118816"; gene_version "9"; gene_name "CCNI"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 77082403 77083126 . - . gene_id "ENSG00000214062"; gene_version "5"; gene_name "RPL7P17"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77112495 77113458 . - . gene_id "ENSG00000271676"; gene_version "1"; gene_name "AC104771.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 77150328 77150437 . - . gene_id "ENSG00000201641"; gene_version "1"; gene_name "RNU6-1187P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 77157151 77433388 . + . gene_id "ENSG00000138764"; gene_version "14"; gene_name "CCNG2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 77216416 77216878 . - . gene_id "ENSG00000270669"; gene_version "1"; gene_name "AC008638.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77311397 77312111 . - . gene_id "ENSG00000250006"; gene_version "2"; gene_name "AC008638.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77350370 77351235 . - . gene_id "ENSG00000248831"; gene_version "2"; gene_name "AC008638.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77394491 77494286 . - . gene_id "ENSG00000249036"; gene_version "1"; gene_name "AC092674.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 77511753 77611834 . + . gene_id "ENSG00000156234"; gene_version "7"; gene_name "CXCL13"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 77702746 77702803 . - . gene_id "ENSG00000221711"; gene_version "1"; gene_name "RF00612"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 77713387 77819615 . - . gene_id "ENSG00000138767"; gene_version "13"; gene_name "CNOT6L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 77862520 77952790 . + . gene_id "ENSG00000169288"; gene_version "17"; gene_name "MRPL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 77864508 77864804 . - . gene_id "ENSG00000250214"; gene_version "1"; gene_name "AC112225.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77958000 77958780 . - . gene_id "ENSG00000248926"; gene_version "1"; gene_name "AC114801.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77963940 77964511 . + . gene_id "ENSG00000248956"; gene_version "1"; gene_name "HMGB1P44"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 77987860 77988813 . - . gene_id "ENSG00000248640"; gene_version "1"; gene_name "HNRNPA1P56"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 78003143 78003439 . + . gene_id "ENSG00000248128"; gene_version "1"; gene_name "AC114801.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 78008512 78008688 . - . gene_id "ENSG00000249072"; gene_version "1"; gene_name "AC114801.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 78057570 78544269 . + . gene_id "ENSG00000138759"; gene_version "18"; gene_name "FRAS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 78180866 78182046 . - . gene_id "ENSG00000249565"; gene_version "2"; gene_name "SERBP1P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 78379197 78379514 . + . gene_id "ENSG00000248117"; gene_version "1"; gene_name "MINOS1P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 78551519 78610451 . + . gene_id "ENSG00000138772"; gene_version "12"; gene_name "ANXA3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 78632273 78632385 . - . gene_id "ENSG00000200998"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 78645903 78682699 . + . gene_id "ENSG00000251442"; gene_version "5"; gene_name "LINC01094"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 78648954 78649242 . - . gene_id "ENSG00000251019"; gene_version "1"; gene_name "HIGD1AP13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 78768499 78768750 . + . gene_id "ENSG00000239793"; gene_version "1"; gene_name "AC098818.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 78773654 78775973 . - . gene_id "ENSG00000260278"; gene_version "1"; gene_name "AC098818.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 78776342 78916372 . + . gene_id "ENSG00000138756"; gene_version "17"; gene_name "BMP2K"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 78820752 78820821 . + . gene_id "ENSG00000266270"; gene_version "1"; gene_name "MIR5096"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 78887127 78939438 . - . gene_id "ENSG00000163291"; gene_version "14"; gene_name "PAQR3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 78898855 78899154 . + . gene_id "ENSG00000242175"; gene_version "3"; gene_name "RN7SL127P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 78971748 79308798 . + . gene_id "ENSG00000249307"; gene_version "5"; gene_name "LINC01088"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 79225694 79326050 . - . gene_id "ENSG00000156269"; gene_version "4"; gene_name "NAA11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 79406352 79408293 . - . gene_id "ENSG00000196475"; gene_version "5"; gene_name "GK2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 79492416 79576460 . + . gene_id "ENSG00000250334"; gene_version "5"; gene_name "LINC00989"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 79587302 79588130 . - . gene_id "ENSG00000249646"; gene_version "2"; gene_name "OR7E94P"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 79596542 79597173 . + . gene_id "ENSG00000251399"; gene_version "1"; gene_name "AC092542.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 79663761 79696837 . + . gene_id "ENSG00000248408"; gene_version "1"; gene_name "LINC02469"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 79827471 79877770 . + . gene_id "ENSG00000251321"; gene_version "1"; gene_name "PCAT4"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 79843102 79843228 . + . gene_id "ENSG00000212620"; gene_version "1"; gene_name "RF00072"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 79901149 80125454 . - . gene_id "ENSG00000163297"; gene_version "16"; gene_name "ANTXR2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 80079532 80081122 . + . gene_id "ENSG00000236530"; gene_version "2"; gene_name "KPNA2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 80161129 80162011 . + . gene_id "ENSG00000244002"; gene_version "1"; gene_name "RPSAP39"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 80183280 80190169 . - . gene_id "ENSG00000248719"; gene_version "1"; gene_name "AC021127.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 80183879 80204329 . + . gene_id "ENSG00000152784"; gene_version "15"; gene_name "PRDM8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 80266599 80336680 . + . gene_id "ENSG00000138675"; gene_version "16"; gene_name "FGF5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 80335720 80963756 . + . gene_id "ENSG00000197826"; gene_version "11"; gene_name "CFAP299"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 80386178 80388716 . - . gene_id "ENSG00000232327"; gene_version "4"; gene_name "AC105917.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 81030965 81057531 . + . gene_id "ENSG00000152785"; gene_version "6"; gene_name "BMP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 81087370 81215117 . - . gene_id "ENSG00000138669"; gene_version "9"; gene_name "PRKG2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 81164940 81193395 . + . gene_id "ENSG00000251059"; gene_version "5"; gene_name "AC139722.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 81334303 81334418 . + . gene_id "ENSG00000207065"; gene_version "1"; gene_name "RNU5A-2P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 81426393 82044244 . - . gene_id "ENSG00000138670"; gene_version "17"; gene_name "RASGEF1B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 81733385 81734207 . - . gene_id "ENSG00000248282"; gene_version "1"; gene_name "MTCYBP44"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 81919995 81920387 . - . gene_id "ENSG00000248448"; gene_version "2"; gene_name "COX5BP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 81928313 81928439 . + . gene_id "ENSG00000252762"; gene_version "1"; gene_name "RF00322"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 82010665 82013095 . - . gene_id "ENSG00000248543"; gene_version "2"; gene_name "NPM1P41"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 82128535 82129656 . + . gene_id "ENSG00000250826"; gene_version "2"; gene_name "HNRNPA3P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 82174547 82174653 . + . gene_id "ENSG00000202485"; gene_version "1"; gene_name "RNU6-499P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 82275071 82276600 . + . gene_id "ENSG00000234568"; gene_version "3"; gene_name "BIN2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 82284971 82340013 . + . gene_id "ENSG00000284516"; gene_version "1"; gene_name "VAMP9P"; gene_source "havana"; gene_biotype "transcribed_unitary_pseudogene"; -chr4 havana gene 82344876 82345540 . - . gene_id "ENSG00000273156"; gene_version "1"; gene_name "AC124016.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 82352498 82374503 . - . gene_id "ENSG00000138668"; gene_version "18"; gene_name "HNRNPD"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 82374301 82384027 . + . gene_id "ENSG00000272677"; gene_version "1"; gene_name "AC124016.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 82401578 82402456 . - . gene_id "ENSG00000250325"; gene_version "1"; gene_name "IGBP1P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 82402638 82402706 . - . gene_id "ENSG00000202440"; gene_version "1"; gene_name "RF00150"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 82422564 82430408 . - . gene_id "ENSG00000152795"; gene_version "17"; gene_name "HNRNPDL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 82430562 82461091 . + . gene_id "ENSG00000145293"; gene_version "15"; gene_name "ENOPH1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 82483170 82562357 . - . gene_id "ENSG00000249242"; gene_version "7"; gene_name "TMEM150C"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 82490823 82491635 . - . gene_id "ENSG00000214988"; gene_version "4"; gene_name "RPL7AP26"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 82494786 82496278 . - . gene_id "ENSG00000227304"; gene_version "3"; gene_name "AC067942.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 82571137 82571814 . + . gene_id "ENSG00000249960"; gene_version "2"; gene_name "AC067942.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 82580117 82581384 . - . gene_id "ENSG00000248113"; gene_version "2"; gene_name "AC067942.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 82613113 82621437 . - . gene_id "ENSG00000231782"; gene_version "6"; gene_name "LINC00575"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 82629539 82798857 . - . gene_id "ENSG00000145284"; gene_version "11"; gene_name "SCD5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 82691737 82692468 . + . gene_id "ENSG00000270480"; gene_version "1"; gene_name "AC073413.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 82753337 82753430 . - . gene_id "ENSG00000207746"; gene_version "1"; gene_name "MIR575"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 82775461 82776101 . + . gene_id "ENSG00000270842"; gene_version "1"; gene_name "AC073413.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 82818661 82901166 . - . gene_id "ENSG00000138674"; gene_version "16"; gene_name "SEC31A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 82893009 82900960 . - . gene_id "ENSG00000251022"; gene_version "6"; gene_name "THAP9-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 82900684 82919969 . + . gene_id "ENSG00000168152"; gene_version "12"; gene_name "THAP9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 82909973 83012926 . - . gene_id "ENSG00000189308"; gene_version "10"; gene_name "LIN54"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 82944738 82944845 . - . gene_id "ENSG00000199530"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 83003412 83003517 . + . gene_id "ENSG00000251874"; gene_version "1"; gene_name "RNU6-615P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 83034447 83075818 . + . gene_id "ENSG00000138663"; gene_version "8"; gene_name "COPS4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 83090048 83137075 . - . gene_id "ENSG00000145287"; gene_version "10"; gene_name "PLAC8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 83233512 83247213 . - . gene_id "ENSG00000250057"; gene_version "1"; gene_name "AC114781.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 83237303 83237444 . + . gene_id "ENSG00000250677"; gene_version "1"; gene_name "AC114781.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 83247179 83248206 . + . gene_id "ENSG00000248401"; gene_version "2"; gene_name "AC114781.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 83261536 83284914 . - . gene_id "ENSG00000173085"; gene_version "14"; gene_name "COQ2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 83292461 83335153 . - . gene_id "ENSG00000173083"; gene_version "14"; gene_name "HPSE"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 83369416 83369523 . - . gene_id "ENSG00000274154"; gene_version "1"; gene_name "AC114781.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 83377363 83378076 . - . gene_id "ENSG00000251647"; gene_version "2"; gene_name "AC114781.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 83407343 83455856 . - . gene_id "ENSG00000163312"; gene_version "10"; gene_name "HELQ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 83455932 83469735 . + . gene_id "ENSG00000163319"; gene_version "10"; gene_name "MRPS18C"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 83459517 83523348 . - . gene_id "ENSG00000163322"; gene_version "13"; gene_name "ABRAXAS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 83477524 83478424 . + . gene_id "ENSG00000213608"; gene_version "5"; gene_name "SLC25A14P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 83502699 83503034 . + . gene_id "ENSG00000239525"; gene_version "1"; gene_name "RPL30P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 83535914 83605875 . + . gene_id "ENSG00000138678"; gene_version "10"; gene_name "GPAT3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 83636196 83636290 . - . gene_id "ENSG00000201633"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 83668510 83731755 . - . gene_id "ENSG00000249171"; gene_version "1"; gene_name "AC021192.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 83796436 84293412 . - . gene_id "ENSG00000250546"; gene_version "5"; gene_name "AC079160.1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 ensembl gene 84233657 84233763 . + . gene_id "ENSG00000200108"; gene_version "1"; gene_name "RNU6-774P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 84244003 84245488 . + . gene_id "ENSG00000214980"; gene_version "4"; gene_name "AC025538.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 84371393 84380189 . - . gene_id "ENSG00000248749"; gene_version "1"; gene_name "AC104063.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 84491987 84498450 . - . gene_id "ENSG00000163623"; gene_version "9"; gene_name "NKX6-1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 84544304 84544519 . - . gene_id "ENSG00000258013"; gene_version "2"; gene_name "RPL3P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 84582979 84651338 . + . gene_id "ENSG00000163624"; gene_version "5"; gene_name "CDS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 84669610 84966391 . - . gene_id "ENSG00000163625"; gene_version "15"; gene_name "WDFY3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 84687725 84688000 . - . gene_id "ENSG00000239466"; gene_version "3"; gene_name "RN7SL552P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 84803258 84810391 . + . gene_id "ENSG00000251260"; gene_version "1"; gene_name "WDFY3-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 84886386 84886486 . - . gene_id "ENSG00000252062"; gene_version "1"; gene_name "RNU6-469P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 84965682 85011277 . + . gene_id "ENSG00000180769"; gene_version "8"; gene_name "WDFY3-AS2"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 ensembl gene 85100496 85100823 . + . gene_id "ENSG00000201901"; gene_version "1"; gene_name "RN7SKP48"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 85246157 85246912 . + . gene_id "ENSG00000248725"; gene_version "3"; gene_name "AC097488.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 85475114 86002670 . + . gene_id "ENSG00000138639"; gene_version "17"; gene_name "ARHGAP24"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 85722468 85722533 . + . gene_id "ENSG00000266421"; gene_version "3"; gene_name "MIR4451"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 85990007 86594625 . - . gene_id "ENSG00000109339"; gene_version "21"; gene_name "MAPK10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 86117912 86219926 . + . gene_id "ENSG00000250062"; gene_version "5"; gene_name "AC104827.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 86336318 86336614 . - . gene_id "ENSG00000252757"; gene_version "1"; gene_name "RN7SKP96"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 mirbase gene 86542482 86542552 . - . gene_id "ENSG00000266515"; gene_version "1"; gene_name "MIR4452"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 86594315 86815171 . + . gene_id "ENSG00000163629"; gene_version "12"; gene_name "PTPN13"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 86823468 86849263 . - . gene_id "ENSG00000145283"; gene_version "7"; gene_name "SLC10A6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 86870191 86871404 . + . gene_id "ENSG00000243312"; gene_version "3"; gene_name "AC093827.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 86876205 86892422 . - . gene_id "ENSG00000163633"; gene_version "11"; gene_name "C4orf36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 86876338 86876652 . + . gene_id "ENSG00000250202"; gene_version "2"; gene_name "AC093827.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 86886472 86936178 . - . gene_id "ENSG00000285458"; gene_version "1"; gene_name "AC093827.5"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 86913266 86914817 . - . gene_id "ENSG00000251411"; gene_version "1"; gene_name "AC093827.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 86924630 86936202 . - . gene_id "ENSG00000284968"; gene_version "1"; gene_name "AC093827.4"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 86935002 87141054 . + . gene_id "ENSG00000172493"; gene_version "20"; gene_name "AFF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 86949669 86950113 . - . gene_id "ENSG00000235043"; gene_version "3"; gene_name "TECRP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 87160103 87240314 . - . gene_id "ENSG00000145332"; gene_version "13"; gene_name "KLHL8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 87166844 87167734 . + . gene_id "ENSG00000248196"; gene_version "1"; gene_name "AC092658.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 87207092 87208086 . + . gene_id "ENSG00000248180"; gene_version "1"; gene_name "GAPDHP60"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 87261931 87266822 . - . gene_id "ENSG00000250572"; gene_version "1"; gene_name "AC108516.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 mirbase gene 87300495 87300583 . - . gene_id "ENSG00000263981"; gene_version "1"; gene_name "MIR5705"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 87303789 87322906 . - . gene_id "ENSG00000170509"; gene_version "11"; gene_name "HSD17B13"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 87317170 87345210 . - . gene_id "ENSG00000255723"; gene_version "1"; gene_name "AC108516.2"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 ensembl_havana gene 87336610 87391386 . - . gene_id "ENSG00000198189"; gene_version "10"; gene_name "HSD17B11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 87386883 87387174 . - . gene_id "ENSG00000240966"; gene_version "3"; gene_name "RN7SL681P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 87410644 87411388 . + . gene_id "ENSG00000249262"; gene_version "2"; gene_name "AC112250.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 87422582 87459454 . + . gene_id "ENSG00000170502"; gene_version "12"; gene_name "NUDT9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 87460807 87462280 . - . gene_id "ENSG00000272856"; gene_version "1"; gene_name "AC112250.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 87473335 87531061 . - . gene_id "ENSG00000152583"; gene_version "12"; gene_name "SPARCL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 87568035 87733956 . - . gene_id "ENSG00000249001"; gene_version "5"; gene_name "AC093895.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 87608553 87616910 . + . gene_id "ENSG00000152591"; gene_version "13"; gene_name "DSPP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 87650307 87664361 . + . gene_id "ENSG00000152592"; gene_version "13"; gene_name "DMP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 87743952 87744053 . - . gene_id "ENSG00000200024"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 87785920 87786371 . - . gene_id "ENSG00000249973"; gene_version "2"; gene_name "CHCHD2P7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 87799581 87812435 . + . gene_id "ENSG00000029559"; gene_version "6"; gene_name "IBSP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 87821411 87846817 . + . gene_id "ENSG00000152595"; gene_version "16"; gene_name "MEPE"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 87891843 87894015 . + . gene_id "ENSG00000183199"; gene_version "6"; gene_name "HSP90AB3P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 87975650 87983426 . + . gene_id "ENSG00000118785"; gene_version "13"; gene_name "SPP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 88000237 88000401 . + . gene_id "ENSG00000202000"; gene_version "1"; gene_name "RNU1-36P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 88007668 88077777 . + . gene_id "ENSG00000118762"; gene_version "7"; gene_name "PKD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 88090264 88231322 . - . gene_id "ENSG00000118777"; gene_version "11"; gene_name "ABCG2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 88163579 88163967 . + . gene_id "ENSG00000241853"; gene_version "1"; gene_name "AC097484.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 88201703 88201810 . + . gene_id "ENSG00000201707"; gene_version "1"; gene_name "RNU6-818P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 88206427 88206552 . - . gene_id "ENSG00000221440"; gene_version "1"; gene_name "RNU6ATAC31P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 88220569 88223837 . - . gene_id "ENSG00000251285"; gene_version "2"; gene_name "AC097484.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 88226729 88226829 . + . gene_id "ENSG00000199326"; gene_version "1"; gene_name "RNU6-1298P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 88257620 88284769 . - . gene_id "ENSG00000163644"; gene_version "14"; gene_name "PPM1K"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 88275205 88275308 . - . gene_id "ENSG00000200469"; gene_version "1"; gene_name "RNU6-112P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 88284942 88331421 . + . gene_id "ENSG00000246375"; gene_version "2"; gene_name "AC107067.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 88330176 88330278 . - . gene_id "ENSG00000207480"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 88378739 88443111 . + . gene_id "ENSG00000138642"; gene_version "14"; gene_name "HERC6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 88457117 88506163 . + . gene_id "ENSG00000138646"; gene_version "8"; gene_name "HERC5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 88508591 88510403 . - . gene_id "ENSG00000249934"; gene_version "2"; gene_name "NCOA4P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 88520985 88523813 . - . gene_id "ENSG00000145337"; gene_version "4"; gene_name "PYURF"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 88521573 88521789 . - . gene_id "ENSG00000255072"; gene_version "1"; gene_name "PIGY"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 88523810 88649847 . + . gene_id "ENSG00000285385"; gene_version "1"; gene_name "AC098582.1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 88523826 88524983 . + . gene_id "ENSG00000285122"; gene_version "1"; gene_name "AC083829.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 88527160 88528170 . + . gene_id "ENSG00000249755"; gene_version "2"; gene_name "AC083829.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 88583666 88583972 . - . gene_id "ENSG00000252322"; gene_version "1"; gene_name "RN7SKP244"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 88592423 88708542 . + . gene_id "ENSG00000138641"; gene_version "16"; gene_name "HERC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 88684848 88684954 . - . gene_id "ENSG00000207524"; gene_version "1"; gene_name "RNU6-33P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 88695915 88697829 . - . gene_id "ENSG00000177432"; gene_version "7"; gene_name "NAP1L5"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 88709789 88730103 . + . gene_id "ENSG00000248019"; gene_version "2"; gene_name "FAM13A-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 88710147 88710265 . + . gene_id "ENSG00000278151"; gene_version "1"; gene_name "RF02114"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 88723209 88723316 . + . gene_id "ENSG00000276003"; gene_version "1"; gene_name "RF02115"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 88725955 89111398 . - . gene_id "ENSG00000138640"; gene_version "14"; gene_name "FAM13A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 89111500 89114899 . + . gene_id "ENSG00000180346"; gene_version "3"; gene_name "TIGD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 89119284 89119871 . + . gene_id "ENSG00000270720"; gene_version "1"; gene_name "AC104785.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 89130852 89130953 . + . gene_id "ENSG00000212226"; gene_version "1"; gene_name "RNU6-907P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 89236386 89308010 . - . gene_id "ENSG00000185477"; gene_version "4"; gene_name "GPRIN3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 89551356 89726752 . + . gene_id "ENSG00000251095"; gene_version "6"; gene_name "AC097478.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 89724099 89838315 . - . gene_id "ENSG00000145335"; gene_version "15"; gene_name "SNCA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 89743792 89744305 . + . gene_id "ENSG00000274238"; gene_version "1"; gene_name "AC097478.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 89747802 89755853 . + . gene_id "ENSG00000277695"; gene_version "1"; gene_name "AC097478.4"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 89748283 89749154 . + . gene_id "ENSG00000276542"; gene_version "1"; gene_name "AC097478.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 89836408 89841978 . + . gene_id "ENSG00000247775"; gene_version "2"; gene_name "SNCA-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 89879532 89954629 . + . gene_id "ENSG00000138722"; gene_version "9"; gene_name "MMRN1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 90127535 91601913 . + . gene_id "ENSG00000184305"; gene_version "15"; gene_name "CCSER1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 90370123 90370427 . + . gene_id "ENSG00000252087"; gene_version "1"; gene_name "RN7SKP248"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 90682996 90683123 . + . gene_id "ENSG00000251401"; gene_version "2"; gene_name "AC093729.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 90838903 90839037 . - . gene_id "ENSG00000187653"; gene_version "11"; gene_name "TMSB4XP8"; gene_source "ensembl_havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 91108023 91112790 . - . gene_id "ENSG00000248984"; gene_version "1"; gene_name "AC004054.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 91319034 91325306 . - . gene_id "ENSG00000249049"; gene_version "1"; gene_name "AC074124.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 91603275 91605292 . + . gene_id "ENSG00000279013"; gene_version "1"; gene_name "AC110774.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 91885046 91885254 . - . gene_id "ENSG00000249891"; gene_version "2"; gene_name "KRT19P6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 91887886 91904335 . + . gene_id "ENSG00000249052"; gene_version "1"; gene_name "AC093810.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 92182477 92184052 . - . gene_id "ENSG00000248817"; gene_version "1"; gene_name "PMPCAP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 92260367 92260751 . - . gene_id "ENSG00000280056"; gene_version "1"; gene_name "AC097520.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 92268767 92277075 . - . gene_id "ENSG00000249152"; gene_version "1"; gene_name "LNCPRESS2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 92297251 92304178 . - . gene_id "ENSG00000248511"; gene_version "1"; gene_name "AC112695.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 92303622 93810157 . + . gene_id "ENSG00000152208"; gene_version "12"; gene_name "GRID2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 92702345 92702659 . + . gene_id "ENSG00000251449"; gene_version "2"; gene_name "MTND1P19"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 92821986 92822918 . - . gene_id "ENSG00000249239"; gene_version "2"; gene_name "AC095059.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 92833685 92838842 . - . gene_id "ENSG00000248627"; gene_version "1"; gene_name "AC095059.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 92884663 92885107 . + . gene_id "ENSG00000248750"; gene_version "2"; gene_name "AC020699.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 93318623 93319786 . - . gene_id "ENSG00000250908"; gene_version "1"; gene_name "AC110800.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 93820171 93820280 . + . gene_id "ENSG00000252342"; gene_version "1"; gene_name "RNA5SP164"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl_havana gene 93828753 93830964 . + . gene_id "ENSG00000172238"; gene_version "4"; gene_name "ATOH1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 94117792 94207556 . - . gene_id "ENSG00000246541"; gene_version "2"; gene_name "AC096746.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 94195940 94196513 . - . gene_id "ENSG00000250897"; gene_version "2"; gene_name "HMGB3P15"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 94207611 94291292 . + . gene_id "ENSG00000163104"; gene_version "17"; gene_name "SMARCAD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 94298535 94342876 . - . gene_id "ENSG00000163106"; gene_version "10"; gene_name "HPGDS"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 94369833 94370163 . + . gene_id "ENSG00000241103"; gene_version "1"; gene_name "AC109925.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 94451857 94668227 . + . gene_id "ENSG00000163110"; gene_version "14"; gene_name "PDLIM5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 94675245 94702570 . + . gene_id "ENSG00000249951"; gene_version "1"; gene_name "AC108067.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 94743800 94757533 . - . gene_id "ENSG00000249599"; gene_version "1"; gene_name "BMPR1B-DT"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 94757968 95158448 . + . gene_id "ENSG00000138696"; gene_version "10"; gene_name "BMPR1B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 95162504 95549206 . - . gene_id "ENSG00000182168"; gene_version "14"; gene_name "UNC5C"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 95549129 95552457 . + . gene_id "ENSG00000271474"; gene_version "1"; gene_name "AC106881.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 95644952 95645293 . - . gene_id "ENSG00000242936"; gene_version "1"; gene_name "RPL30P6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 95840019 95841474 . + . gene_id "ENSG00000163114"; gene_version "5"; gene_name "PDHA2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 95868667 95868764 . - . gene_id "ENSG00000200622"; gene_version "1"; gene_name "RNU6-1059P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 96152297 96152403 . - . gene_id "ENSG00000201744"; gene_version "1"; gene_name "RNU6-34P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 96212279 96213100 . + . gene_id "ENSG00000250655"; gene_version "1"; gene_name "AC096661.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 96310701 96818864 . + . gene_id "ENSG00000248510"; gene_version "2"; gene_name "LINC02267"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 96348734 96349038 . - . gene_id "ENSG00000201640"; gene_version "2"; gene_name "RN7SKP28"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 96902801 96903050 . + . gene_id "ENSG00000236764"; gene_version "4"; gene_name "COX7A2P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 97120701 97135059 . + . gene_id "ENSG00000253170"; gene_version "1"; gene_name "AC108515.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 97184093 98143240 . - . gene_id "ENSG00000163116"; gene_version "9"; gene_name "STPG2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 97334635 97633823 . - . gene_id "ENSG00000254044"; gene_version "5"; gene_name "AC034154.1"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 havana gene 97366926 97490164 . + . gene_id "ENSG00000251620"; gene_version "1"; gene_name "STPG2-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 97916353 97917401 . - . gene_id "ENSG00000250293"; gene_version "1"; gene_name "CRYZP2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 98025390 98026240 . + . gene_id "ENSG00000242697"; gene_version "2"; gene_name "RPL5P12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 98048555 98049043 . + . gene_id "ENSG00000214904"; gene_version "5"; gene_name "DUTP8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 98251688 98261630 . - . gene_id "ENSG00000214559"; gene_version "3"; gene_name "AC019077.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 98261384 98443861 . + . gene_id "ENSG00000138698"; gene_version "14"; gene_name "RAP1GDS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 98409290 98409763 . + . gene_id "ENSG00000242318"; gene_version "1"; gene_name "AC058823.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 98470367 98658629 . - . gene_id "ENSG00000168785"; gene_version "7"; gene_name "TSPAN5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 98496364 98509935 . + . gene_id "ENSG00000251523"; gene_version "1"; gene_name "AC108159.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 98658904 98664550 . + . gene_id "ENSG00000260641"; gene_version "1"; gene_name "AC114811.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 98713804 98713971 . - . gene_id "ENSG00000249764"; gene_version "1"; gene_name "AC114811.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 98740742 98741231 . + . gene_id "ENSG00000227118"; gene_version "3"; gene_name "BTF3P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 98871684 98930637 . - . gene_id "ENSG00000151247"; gene_version "12"; gene_name "EIF4E"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 98909537 98909848 . - . gene_id "ENSG00000249055"; gene_version "1"; gene_name "TBCAP3"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 98928897 98994994 . + . gene_id "ENSG00000263923"; gene_version "1"; gene_name "AC019131.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 98955982 98956767 . + . gene_id "ENSG00000214886"; gene_version "4"; gene_name "FAM177A1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 98966815 98966873 . - . gene_id "ENSG00000252548"; gene_version "1"; gene_name "RNU7-149P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 98976800 98977117 . - . gene_id "ENSG00000251437"; gene_version "1"; gene_name "NDUFS5P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 98995620 99062813 . + . gene_id "ENSG00000164024"; gene_version "11"; gene_name "METAP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 98997387 98997460 . + . gene_id "ENSG00000265213"; gene_version "1"; gene_name "MIR3684"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 99022311 99023131 . - . gene_id "ENSG00000250496"; gene_version "2"; gene_name "ABT1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 99067256 99068125 . - . gene_id "ENSG00000272777"; gene_version "1"; gene_name "AC019131.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 99070978 99088801 . - . gene_id "ENSG00000197894"; gene_version "10"; gene_name "ADH5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99088857 99301356 . + . gene_id "ENSG00000246090"; gene_version "6"; gene_name "AP002026.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 99123657 99157792 . - . gene_id "ENSG00000198099"; gene_version "8"; gene_name "ADH4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99160514 99161645 . - . gene_id "ENSG00000249065"; gene_version "2"; gene_name "PCNAP1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 99202638 99219537 . - . gene_id "ENSG00000172955"; gene_version "17"; gene_name "ADH6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99276367 99291028 . - . gene_id "ENSG00000187758"; gene_version "7"; gene_name "ADH1A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99304964 99352760 . - . gene_id "ENSG00000196616"; gene_version "13"; gene_name "ADH1B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99336492 99353027 . - . gene_id "ENSG00000248144"; gene_version "5"; gene_name "ADH1C"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99412261 99435737 . - . gene_id "ENSG00000196344"; gene_version "11"; gene_name "ADH7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99469598 99498698 . - . gene_id "ENSG00000250300"; gene_version "1"; gene_name "AP001960.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 99511004 99542303 . + . gene_id "ENSG00000138813"; gene_version "9"; gene_name "C4orf17"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99546709 99564032 . - . gene_id "ENSG00000145331"; gene_version "13"; gene_name "TRMT10A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99563761 99623999 . + . gene_id "ENSG00000138823"; gene_version "13"; gene_name "MTTP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99594799 99625913 . - . gene_id "ENSG00000248676"; gene_version "1"; gene_name "AC083902.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 99636529 99654648 . - . gene_id "ENSG00000248713"; gene_version "1"; gene_name "C4orf54"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99816833 99870154 . + . gene_id "ENSG00000070190"; gene_version "12"; gene_name "DAPP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99844138 99844696 . + . gene_id "ENSG00000279913"; gene_version "1"; gene_name "AP001962.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 99878336 99894490 . - . gene_id "ENSG00000109270"; gene_version "12"; gene_name "LAMTOR3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 99896248 99946726 . - . gene_id "ENSG00000164031"; gene_version "16"; gene_name "DNAJB14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99942081 99942522 . - . gene_id "ENSG00000279098"; gene_version "1"; gene_name "AC097460.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 99948086 99950388 . - . gene_id "ENSG00000164032"; gene_version "11"; gene_name "H2AFZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 99950006 100195099 . + . gene_id "ENSG00000245322"; gene_version "6"; gene_name "AC097460.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 99990737 99991477 . - . gene_id "ENSG00000250403"; gene_version "1"; gene_name "AC097460.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 100041841 100042104 . - . gene_id "ENSG00000248820"; gene_version "2"; gene_name "DYNLL1P6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 100185870 100190782 . - . gene_id "ENSG00000145358"; gene_version "6"; gene_name "DDIT4L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 100190033 100215505 . + . gene_id "ENSG00000249710"; gene_version "1"; gene_name "AP001961.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 100395341 100880126 . - . gene_id "ENSG00000164035"; gene_version "9"; gene_name "EMCN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 100660279 100675113 . - . gene_id "ENSG00000250223"; gene_version "1"; gene_name "LINC01216"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 100778582 100791235 . - . gene_id "ENSG00000251219"; gene_version "1"; gene_name "LINC01217"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 100812255 100814280 . - . gene_id "ENSG00000251636"; gene_version "1"; gene_name "LINC01218"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 ensembl_havana gene 101023409 101348278 . - . gene_id "ENSG00000138814"; gene_version "16"; gene_name "PPP3CA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 101240795 101240872 . - . gene_id "ENSG00000273882"; gene_version "1"; gene_name "MIR8066"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 101330302 101330414 . - . gene_id "ENSG00000221265"; gene_version "1"; gene_name "MIR1255A"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 101347780 101348883 . + . gene_id "ENSG00000254531"; gene_version "1"; gene_name "FLJ20021"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 101411286 102074812 . + . gene_id "ENSG00000153064"; gene_version "11"; gene_name "BANK1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 101723876 101723980 . + . gene_id "ENSG00000199529"; gene_version "1"; gene_name "RNU6-462P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 101972423 101972798 . + . gene_id "ENSG00000251149"; gene_version "1"; gene_name "MTND5P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 101976894 102036903 . - . gene_id "ENSG00000251309"; gene_version "1"; gene_name "AP002075.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 102251041 102431258 . - . gene_id "ENSG00000138821"; gene_version "12"; gene_name "SLC39A8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 102348392 102348691 . - . gene_id "ENSG00000241144"; gene_version "3"; gene_name "RN7SL728P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 102418602 102450010 . - . gene_id "ENSG00000248161"; gene_version "5"; gene_name "AC098487.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 102461250 102462152 . + . gene_id "ENSG00000251572"; gene_version "2"; gene_name "AF213884.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 102500841 102501319 . - . gene_id "ENSG00000260651"; gene_version "1"; gene_name "AF213884.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 102501329 102617302 . + . gene_id "ENSG00000109320"; gene_version "11"; gene_name "NFKB1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 102630770 102760994 . - . gene_id "ENSG00000109323"; gene_version "9"; gene_name "MANBA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 102662611 102663073 . + . gene_id "ENSG00000241981"; gene_version "2"; gene_name "AF213884.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 102727274 102730721 . - . gene_id "ENSG00000230069"; gene_version "3"; gene_name "LRRC37A15P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 102728746 102730171 . - . gene_id "ENSG00000248971"; gene_version "2"; gene_name "KRT8P46"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 102734358 102734612 . + . gene_id "ENSG00000224207"; gene_version "3"; gene_name "AC018797.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 102751401 102752641 . + . gene_id "ENSG00000251288"; gene_version "2"; gene_name "AC018797.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 102794383 102868896 . - . gene_id "ENSG00000109332"; gene_version "19"; gene_name "UBE2D3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 102828055 102844075 . + . gene_id "ENSG00000246560"; gene_version "2"; gene_name "AC018797.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 102837047 102837099 . - . gene_id "ENSG00000252739"; gene_version "1"; gene_name "RNU7-151P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 102868974 102892807 . + . gene_id "ENSG00000145354"; gene_version "11"; gene_name "CISD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 102885048 103019739 . - . gene_id "ENSG00000164037"; gene_version "16"; gene_name "SLC9B1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 102896725 102898237 . + . gene_id "ENSG00000250651"; gene_version "1"; gene_name "PABPC1P7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 102961956 102963327 . + . gene_id "ENSG00000249283"; gene_version "3"; gene_name "ACTR3BP4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 103019868 103085829 . - . gene_id "ENSG00000164038"; gene_version "14"; gene_name "SLC9B2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 103079435 103099883 . - . gene_id "ENSG00000164039"; gene_version "14"; gene_name "BDH2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 103105806 103198409 . - . gene_id "ENSG00000138778"; gene_version "11"; gene_name "CENPE"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 103256159 103453658 . + . gene_id "ENSG00000248740"; gene_version "5"; gene_name "LINC02428"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 103548745 103624534 . + . gene_id "ENSG00000251577"; gene_version "5"; gene_name "AC105460.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 103550927 103559127 . - . gene_id "ENSG00000250920"; gene_version "1"; gene_name "AC105460.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 103572089 103574082 . + . gene_id "ENSG00000251571"; gene_version "1"; gene_name "DDX3P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 103586031 103719816 . - . gene_id "ENSG00000169836"; gene_version "4"; gene_name "TACR3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 103924540 103924641 . + . gene_id "ENSG00000252460"; gene_version "1"; gene_name "RNU6-635P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 103961616 104036923 . + . gene_id "ENSG00000249614"; gene_version "1"; gene_name "LINC02503"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 104230380 104411035 . + . gene_id "ENSG00000251170"; gene_version "5"; gene_name "AC004052.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 104468312 104494901 . - . gene_id "ENSG00000168772"; gene_version "10"; gene_name "CXXC4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 104490965 104697592 . + . gene_id "ENSG00000245384"; gene_version "1"; gene_name "CXXC4-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 104556960 104568877 . + . gene_id "ENSG00000250670"; gene_version "1"; gene_name "AC004063.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 104653874 104966793 . - . gene_id "ENSG00000248242"; gene_version "1"; gene_name "AC004053.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 104886118 104886955 . - . gene_id "ENSG00000244470"; gene_version "2"; gene_name "AC105918.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 104907357 105120000 . + . gene_id "ENSG00000248373"; gene_version "5"; gene_name "AC096577.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 104974672 104974771 . + . gene_id "ENSG00000251906"; gene_version "2"; gene_name "RNU6-351P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 104996900 104997052 . - . gene_id "ENSG00000276992"; gene_version "1"; gene_name "AC096577.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 105102891 105104004 . - . gene_id "ENSG00000251473"; gene_version "2"; gene_name "AC004069.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 105105987 105106094 . + . gene_id "ENSG00000252136"; gene_version "1"; gene_name "RF00322"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 105137280 105140619 . - . gene_id "ENSG00000251259"; gene_version "1"; gene_name "AC004069.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 105145875 105279816 . + . gene_id "ENSG00000168769"; gene_version "13"; gene_name "TET2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 105171354 105178063 . - . gene_id "ENSG00000251586"; gene_version "1"; gene_name "TET2-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 105293664 105293946 . + . gene_id "ENSG00000243383"; gene_version "3"; gene_name "RN7SL89P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 105369077 105474081 . - . gene_id "ENSG00000138777"; gene_version "19"; gene_name "PPA2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 105406997 105407092 . + . gene_id "ENSG00000200917"; gene_version "1"; gene_name "RNU6-553P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 105484698 105486080 . + . gene_id "ENSG00000249264"; gene_version "1"; gene_name "EEF1A1P9"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 105526596 105527397 . - . gene_id "ENSG00000216425"; gene_version "4"; gene_name "AC004066.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 105532475 105532630 . + . gene_id "ENSG00000250922"; gene_version "1"; gene_name "ATP5F1EP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 105540190 105552355 . - . gene_id "ENSG00000250522"; gene_version "1"; gene_name "AC004066.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 105552620 105708093 . + . gene_id "ENSG00000236699"; gene_version "8"; gene_name "ARHGEF38"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 105561591 105570238 . + . gene_id "ENSG00000249885"; gene_version "1"; gene_name "ARHGEF38-IT1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 105679050 105680094 . - . gene_id "ENSG00000248778"; gene_version "1"; gene_name "AC105391.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 105682627 105895986 . - . gene_id "ENSG00000138785"; gene_version "14"; gene_name "INTS12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 105708778 105847728 . + . gene_id "ENSG00000138780"; gene_version "14"; gene_name "GSTCD"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 105746245 105827172 . - . gene_id "ENSG00000251175"; gene_version "5"; gene_name "AC008243.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 105894775 106004027 . + . gene_id "ENSG00000168743"; gene_version "12"; gene_name "NPNT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 105927060 105932722 . - . gene_id "ENSG00000250740"; gene_version "1"; gene_name "AC109361.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 106003317 106022478 . - . gene_id "ENSG00000249635"; gene_version "1"; gene_name "AC109361.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 106041599 106321495 . - . gene_id "ENSG00000145348"; gene_version "16"; gene_name "TBCK"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 106315544 106349226 . + . gene_id "ENSG00000164022"; gene_version "16"; gene_name "AIMP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 106357485 106368825 . - . gene_id "ENSG00000250298"; gene_version "4"; gene_name "GIMD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 106433624 106453448 . + . gene_id "ENSG00000249613"; gene_version "1"; gene_name "LINC02173"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 106836498 106837601 . - . gene_id "ENSG00000248915"; gene_version "2"; gene_name "ACTR6P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 106921802 107283806 . - . gene_id "ENSG00000155011"; gene_version "8"; gene_name "DKK2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 107203349 107203924 . - . gene_id "ENSG00000213522"; gene_version "4"; gene_name "RAC1P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 107258700 107301870 . + . gene_id "ENSG00000251081"; gene_version "1"; gene_name "AC104663.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 107435118 107435220 . + . gene_id "ENSG00000252470"; gene_version "1"; gene_name "RNU6-551P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 107590276 107720452 . - . gene_id "ENSG00000138801"; gene_version "8"; gene_name "PAPSS1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 107824563 107915047 . + . gene_id "ENSG00000164023"; gene_version "14"; gene_name "SGMS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 107863479 107978799 . - . gene_id "ENSG00000245293"; gene_version "2"; gene_name "AC096564.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 107867807 107867910 . - . gene_id "ENSG00000222691"; gene_version "1"; gene_name "RNU6-733P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 107931369 107953457 . + . gene_id "ENSG00000155016"; gene_version "17"; gene_name "CYP2U1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 107936031 107941255 . - . gene_id "ENSG00000249604"; gene_version "1"; gene_name "AC096564.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 107989714 108035175 . + . gene_id "ENSG00000138796"; gene_version "16"; gene_name "HADH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 108047545 108168956 . - . gene_id "ENSG00000138795"; gene_version "9"; gene_name "LEF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 108167525 108256836 . + . gene_id "ENSG00000232021"; gene_version "6"; gene_name "LEF1-AS1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 108407843 108408578 . - . gene_id "ENSG00000239939"; gene_version "1"; gene_name "RPSAP34"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 108415220 108416639 . + . gene_id "ENSG00000278589"; gene_version "1"; gene_name "ZACNP1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 108417705 108419763 . - . gene_id "ENSG00000250485"; gene_version "1"; gene_name "EXOC7P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 108538190 108620460 . - . gene_id "ENSG00000234492"; gene_version "4"; gene_name "RPL34-AS1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 108620566 108630412 . + . gene_id "ENSG00000109475"; gene_version "16"; gene_name "RPL34"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 108650584 108667820 . + . gene_id "ENSG00000198856"; gene_version "12"; gene_name "OSTC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 108652150 108652256 . + . gene_id "ENSG00000206601"; gene_version "1"; gene_name "RNU6-431P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 108742040 108763054 . - . gene_id "ENSG00000164089"; gene_version "8"; gene_name "ETNPPL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 108773613 108774020 . + . gene_id "ENSG00000249257"; gene_version "1"; gene_name "AC097473.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 108788745 108789779 . - . gene_id "ENSG00000250185"; gene_version "2"; gene_name "RCC2P8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 108808725 109302752 . - . gene_id "ENSG00000188517"; gene_version "15"; gene_name "COL25A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 109303035 109316135 . + . gene_id "ENSG00000246774"; gene_version "1"; gene_name "ZCCHC23"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 109346326 109347459 . - . gene_id "ENSG00000249465"; gene_version "1"; gene_name "RBMXP4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 109347475 109433817 . - . gene_id "ENSG00000247950"; gene_version "6"; gene_name "SEC24B-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 109433772 109540896 . + . gene_id "ENSG00000138802"; gene_version "11"; gene_name "SEC24B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 109450772 109451068 . - . gene_id "ENSG00000243227"; gene_version "3"; gene_name "RN7SL55P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 mirbase gene 109488698 109488795 . + . gene_id "ENSG00000207988"; gene_version "1"; gene_name "MIR576"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 109553243 109554094 . - . gene_id "ENSG00000225094"; gene_version "3"; gene_name "SETP20"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 109555170 109555732 . + . gene_id "ENSG00000249965"; gene_version "2"; gene_name "CDC42P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 109560205 109688726 . + . gene_id "ENSG00000005059"; gene_version "15"; gene_name "MCUB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 109673843 109674124 . + . gene_id "ENSG00000248785"; gene_version "1"; gene_name "HIGD1AP14"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 109688622 109703583 . - . gene_id "ENSG00000138794"; gene_version "9"; gene_name "CASP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 109692004 109692703 . + . gene_id "ENSG00000273447"; gene_version "1"; gene_name "AC004067.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 109709989 109730077 . - . gene_id "ENSG00000123739"; gene_version "10"; gene_name "PLA2G12A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 109713916 109801999 . - . gene_id "ENSG00000285330"; gene_version "1"; gene_name "AC126283.2"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 109740694 109802179 . - . gene_id "ENSG00000205403"; gene_version "13"; gene_name "CFI"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 109815047 109815410 . - . gene_id "ENSG00000272795"; gene_version "1"; gene_name "AC126283.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 109815510 109824740 . + . gene_id "ENSG00000109534"; gene_version "16"; gene_name "GAR1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 109827994 109844604 . + . gene_id "ENSG00000180245"; gene_version "4"; gene_name "RRH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 109848202 109872315 . + . gene_id "ENSG00000183423"; gene_version "11"; gene_name "LRIT3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 109879070 109879897 . - . gene_id "ENSG00000249681"; gene_version "2"; gene_name "KRT19P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 109912884 110012266 . + . gene_id "ENSG00000138798"; gene_version "11"; gene_name "EGF"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 109992325 109992431 . + . gene_id "ENSG00000207260"; gene_version "1"; gene_name "RNU6-35P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 110045846 110199199 . - . gene_id "ENSG00000170522"; gene_version "9"; gene_name "ELOVL6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 110117736 110118070 . + . gene_id "ENSG00000263940"; gene_version "2"; gene_name "RN7SL275P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 110146374 110147248 . + . gene_id "ENSG00000248200"; gene_version "2"; gene_name "AC093770.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 110251871 110252099 . - . gene_id "ENSG00000166530"; gene_version "8"; gene_name "HSBP1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 110264865 110265017 . - . gene_id "ENSG00000250594"; gene_version "2"; gene_name "AC108145.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 110278185 110278291 . + . gene_id "ENSG00000212160"; gene_version "1"; gene_name "RNU6-205P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 110291644 110293573 . + . gene_id "ENSG00000250304"; gene_version "2"; gene_name "ZBED1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 110365733 110565285 . + . gene_id "ENSG00000138792"; gene_version "9"; gene_name "ENPEP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 110399773 110400511 . - . gene_id "ENSG00000251464"; gene_version "2"; gene_name "RPL7L1P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 110415898 110418504 . + . gene_id "ENSG00000251046"; gene_version "2"; gene_name "ZNF969P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 110433109 110433188 . - . gene_id "ENSG00000199894"; gene_version "1"; gene_name "RF00494"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 110512488 110519505 . - . gene_id "ENSG00000250511"; gene_version "1"; gene_name "AC098798.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 110595513 110615458 . - . gene_id "ENSG00000250103"; gene_version "2"; gene_name "PANCR"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 110617423 110642123 . - . gene_id "ENSG00000164093"; gene_version "16"; gene_name "PITX2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 110794403 110797344 . + . gene_id "ENSG00000249519"; gene_version "1"; gene_name "LINC01438"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 mirbase gene 110860582 110860647 . - . gene_id "ENSG00000215961"; gene_version "1"; gene_name "MIR297"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 110945109 110945799 . - . gene_id "ENSG00000251483"; gene_version "2"; gene_name "LYPLA1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 111063583 111064227 . + . gene_id "ENSG00000251312"; gene_version "2"; gene_name "AC004062.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 111331412 111331518 . + . gene_id "ENSG00000200963"; gene_version "1"; gene_name "RNU6-289P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 111551854 111552173 . + . gene_id "ENSG00000241722"; gene_version "2"; gene_name "AC083795.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 111640495 111648808 . + . gene_id "ENSG00000248656"; gene_version "1"; gene_name "AC083795.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 111802801 111839886 . + . gene_id "ENSG00000250855"; gene_version "1"; gene_name "AC139718.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 111804418 111809694 . - . gene_id "ENSG00000248432"; gene_version "1"; gene_name "AC139718.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 111826881 112072698 . - . gene_id "ENSG00000249815"; gene_version "1"; gene_name "AC004704.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 112068010 112068526 . + . gene_id "ENSG00000250556"; gene_version "1"; gene_name "CCDC34P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112077598 112078400 . + . gene_id "ENSG00000250307"; gene_version "2"; gene_name "TUBB8P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112116510 112116903 . - . gene_id "ENSG00000240459"; gene_version "2"; gene_name "AC093663.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 112145397 112195256 . + . gene_id "ENSG00000174749"; gene_version "5"; gene_name "FAM241A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112171215 112171527 . + . gene_id "ENSG00000243280"; gene_version "2"; gene_name "AC093663.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112229561 112231596 . - . gene_id "ENSG00000260526"; gene_version "1"; gene_name "AC109347.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 112231737 112270047 . + . gene_id "ENSG00000138660"; gene_version "11"; gene_name "AP1AR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112272968 112273316 . - . gene_id "ENSG00000272567"; gene_version "1"; gene_name "AC109347.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 112274542 112285903 . - . gene_id "ENSG00000145365"; gene_version "10"; gene_name "TIFA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 112285509 112442620 . + . gene_id "ENSG00000073331"; gene_version "17"; gene_name "ALPK1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112356135 112359819 . + . gene_id "ENSG00000251441"; gene_version "2"; gene_name "RTEL1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112455924 112457785 . + . gene_id "ENSG00000248697"; gene_version "1"; gene_name "TOX4P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 112513516 112516172 . - . gene_id "ENSG00000178403"; gene_version "3"; gene_name "NEUROG2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112515385 112546881 . + . gene_id "ENSG00000249509"; gene_version "1"; gene_name "AC023886.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 112530371 112530672 . - . gene_id "ENSG00000248439"; gene_version "2"; gene_name "RPL23AP94"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 112539333 112636995 . - . gene_id "ENSG00000138658"; gene_version "15"; gene_name "ZGRF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112564988 112565398 . + . gene_id "ENSG00000250966"; gene_version "2"; gene_name "AC023886.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 112636964 112657592 . + . gene_id "ENSG00000174720"; gene_version "15"; gene_name "LARP7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112646476 112650051 . - . gene_id "ENSG00000249532"; gene_version "5"; gene_name "AC106864.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 mirbase gene 112647874 112647941 . - . gene_id "ENSG00000199169"; gene_version "1"; gene_name "MIR367"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 112648004 112648071 . - . gene_id "ENSG00000199145"; gene_version "1"; gene_name "MIR302D"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 112648183 112648251 . - . gene_id "ENSG00000207927"; gene_version "1"; gene_name "MIR302A"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 112648363 112648430 . - . gene_id "ENSG00000199102"; gene_version "1"; gene_name "MIR302C"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 112648485 112648557 . - . gene_id "ENSG00000284463"; gene_version "1"; gene_name "MIR302B"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 112685055 112685503 . + . gene_id "ENSG00000220924"; gene_version "4"; gene_name "OSTCP4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112693047 112706810 . - . gene_id "ENSG00000250046"; gene_version "3"; gene_name "AC106864.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 112693459 112693792 . - . gene_id "ENSG00000248633"; gene_version "1"; gene_name "WRBP1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 112738672 112739106 . + . gene_id "ENSG00000241002"; gene_version "1"; gene_name "AC017007.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 112755816 112755917 . - . gene_id "ENSG00000202536"; gene_version "2"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 112788083 112788878 . - . gene_id "ENSG00000241741"; gene_version "1"; gene_name "RPL7AP30"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112797050 112798691 . - . gene_id "ENSG00000250500"; gene_version "1"; gene_name "AC017007.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 112818109 113383740 . + . gene_id "ENSG00000145362"; gene_version "17"; gene_name "ANK2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 112826307 112827607 . + . gene_id "ENSG00000234841"; gene_version "4"; gene_name "AC017007.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 112880298 112882330 . - . gene_id "ENSG00000251126"; gene_version "2"; gene_name "AC017007.5"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 112881718 112882132 . - . gene_id "ENSG00000228814"; gene_version "4"; gene_name "AC017007.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 112979590 113071962 . - . gene_id "ENSG00000248152"; gene_version "1"; gene_name "AC093879.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 113031287 113034551 . - . gene_id "ENSG00000249373"; gene_version "2"; gene_name "AC093879.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 mirbase gene 113106863 113106955 . + . gene_id "ENSG00000283193"; gene_version "1"; gene_name "MIR1243"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 113152282 113152362 . + . gene_id "ENSG00000275810"; gene_version "1"; gene_name "MIR8082"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 113214046 113217170 . - . gene_id "ENSG00000196656"; gene_version "7"; gene_name "AC004057.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl gene 113419840 113420136 . + . gene_id "ENSG00000239279"; gene_version "3"; gene_name "RN7SL184P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 113420323 113420486 . + . gene_id "ENSG00000206820"; gene_version "1"; gene_name "RNU1-138P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 113451032 113761927 . - . gene_id "ENSG00000145349"; gene_version "16"; gene_name "CAMK2D"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 113840050 113840236 . + . gene_id "ENSG00000250229"; gene_version "1"; gene_name "AC111193.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 113900284 113979727 . - . gene_id "ENSG00000180801"; gene_version "13"; gene_name "ARSJ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 113943256 113944320 . + . gene_id "ENSG00000249304"; gene_version "1"; gene_name "AC104779.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 114103938 114104225 . + . gene_id "ENSG00000248716"; gene_version "2"; gene_name "AC093815.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 114598455 114678224 . + . gene_id "ENSG00000174607"; gene_version "10"; gene_name "UGT8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 114656759 114656854 . + . gene_id "ENSG00000207931"; gene_version "1"; gene_name "MIR577"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 114713579 114714920 . - . gene_id "ENSG00000250215"; gene_version "1"; gene_name "CIR1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 114799331 114799629 . + . gene_id "ENSG00000240637"; gene_version "3"; gene_name "RN7SL808P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 114827763 115113876 . - . gene_id "ENSG00000138653"; gene_version "9"; gene_name "NDST4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 115142982 115143303 . + . gene_id "ENSG00000251308"; gene_version "1"; gene_name "MRPS33P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 115628812 115629707 . + . gene_id "ENSG00000250693"; gene_version "2"; gene_name "RPF2P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 115764099 115764819 . - . gene_id "ENSG00000248488"; gene_version "2"; gene_name "PGAM4P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 115920707 115921978 . + . gene_id "ENSG00000250363"; gene_version "1"; gene_name "KRT18P21"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 115922015 116297160 . - . gene_id "ENSG00000249259"; gene_version "3"; gene_name "AC027613.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 116043407 116044045 . - . gene_id "ENSG00000250442"; gene_version "1"; gene_name "EIF3KP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 116193997 116194751 . - . gene_id "ENSG00000250627"; gene_version "2"; gene_name "TTC39CP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 116298876 116300320 . + . gene_id "ENSG00000270394"; gene_version "4"; gene_name "MTRNR2L13"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 116299725 116299768 . + . gene_id "ENSG00000284253"; gene_version "1"; gene_name "MIR1973"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 116378919 116379269 . + . gene_id "ENSG00000250272"; gene_version "1"; gene_name "TRMT112P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 116425983 116430892 . - . gene_id "ENSG00000248139"; gene_version "2"; gene_name "CUL4AP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 116489364 116515146 . - . gene_id "ENSG00000250791"; gene_version "1"; gene_name "AC106892.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 116598161 116599611 . + . gene_id "ENSG00000213493"; gene_version "3"; gene_name "ACTN4P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 116839279 116839385 . + . gene_id "ENSG00000201752"; gene_version "1"; gene_name "RNU6-119P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 116858093 116858973 . + . gene_id "ENSG00000271053"; gene_version "1"; gene_name "AC093765.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 117083554 117085576 . - . gene_id "ENSG00000174599"; gene_version "5"; gene_name "TRAM1L1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 117249924 117250188 . + . gene_id "ENSG00000223605"; gene_version "1"; gene_name "AC107399.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 117314597 117360639 . - . gene_id "ENSG00000224932"; gene_version "1"; gene_name "LINC02262"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 117360625 117372852 . + . gene_id "ENSG00000228358"; gene_version "5"; gene_name "LINC02263"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 117406166 117691188 . + . gene_id "ENSG00000236922"; gene_version "9"; gene_name "LINC01378"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 117413462 117414279 . + . gene_id "ENSG00000237684"; gene_version "1"; gene_name "RPSAP35"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 117574512 117576174 . - . gene_id "ENSG00000213492"; gene_version "2"; gene_name "NT5C3AP1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 117834401 117869948 . + . gene_id "ENSG00000229565"; gene_version "1"; gene_name "LINC02264"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 118033618 118258648 . + . gene_id "ENSG00000164100"; gene_version "8"; gene_name "NDST3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 118193405 118194751 . - . gene_id "ENSG00000251463"; gene_version "2"; gene_name "FKBP4P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 118278709 118279823 . + . gene_id "ENSG00000269893"; gene_version "6"; gene_name "SNHG8"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 118279190 118279320 . + . gene_id "ENSG00000275994"; gene_version "1"; gene_name "SNORA24"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 118280038 118353003 . - . gene_id "ENSG00000164099"; gene_version "3"; gene_name "PRSS12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 118400514 118400834 . - . gene_id "ENSG00000230671"; gene_version "2"; gene_name "NDUFS5P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 118460224 118460301 . - . gene_id "ENSG00000273716"; gene_version "2"; gene_name "AC092670.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 118467590 118554100 . + . gene_id "ENSG00000154608"; gene_version "14"; gene_name "CEP170P1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 118591773 118633729 . + . gene_id "ENSG00000260404"; gene_version "3"; gene_name "AC110079.1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 ensembl gene 118606450 118606553 . + . gene_id "ENSG00000223225"; gene_version "1"; gene_name "RNU6-1054P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 118635970 118638782 . - . gene_id "ENSG00000248213"; gene_version "3"; gene_name "CICP16"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 118640673 118640858 . + . gene_id "ENSG00000251155"; gene_version "2"; gene_name "SEPT14P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 118664087 118685341 . - . gene_id "ENSG00000281731"; gene_version "2"; gene_name "AC110079.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 118685368 118715433 . + . gene_id "ENSG00000145388"; gene_version "14"; gene_name "METTL14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 118722823 118838683 . - . gene_id "ENSG00000150961"; gene_version "14"; gene_name "SEC24D"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 118850688 119061247 . + . gene_id "ENSG00000172403"; gene_version "10"; gene_name "SYNPO2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 119006032 119006401 . + . gene_id "ENSG00000249002"; gene_version "2"; gene_name "AC096745.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 119042024 119043937 . + . gene_id "ENSG00000280551"; gene_version "1"; gene_name "AC096745.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 119135784 119187789 . + . gene_id "ENSG00000172399"; gene_version "5"; gene_name "MYOZ2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 119192773 119212644 . - . gene_id "ENSG00000178636"; gene_version "8"; gene_name "AC092656.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 119212587 119295517 . + . gene_id "ENSG00000145390"; gene_version "11"; gene_name "USP53"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 119296419 119304445 . - . gene_id "ENSG00000164096"; gene_version "12"; gene_name "C4orf3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 119317250 119322390 . - . gene_id "ENSG00000145384"; gene_version "3"; gene_name "FABP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 119334329 119378233 . + . gene_id "ENSG00000250412"; gene_version "1"; gene_name "KLHL2P1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl gene 119367562 119367646 . + . gene_id "ENSG00000201186"; gene_version "1"; gene_name "RNU4-33P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 119391831 119395335 . - . gene_id "ENSG00000249244"; gene_version "1"; gene_name "AC110373.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 119407967 119454638 . - . gene_id "ENSG00000283050"; gene_version "1"; gene_name "GTF2IP12"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 119409333 119410233 . + . gene_id "ENSG00000260091"; gene_version "1"; gene_name "AC093752.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 119434005 119434108 . - . gene_id "ENSG00000223208"; gene_version "1"; gene_name "RNU6-1217P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 119454791 119552025 . + . gene_id "ENSG00000245958"; gene_version "6"; gene_name "AC093752.1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 119456350 119457277 . + . gene_id "ENSG00000250950"; gene_version "1"; gene_name "AC093752.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 119494395 119628991 . - . gene_id "ENSG00000138735"; gene_version "15"; gene_name "PDE5A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 119569699 119569825 . + . gene_id "ENSG00000221245"; gene_version "1"; gene_name "RF00614"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 119799089 119804515 . - . gene_id "ENSG00000250772"; gene_version "5"; gene_name "LINC01365"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 119937557 119963898 . + . gene_id "ENSG00000250183"; gene_version "2"; gene_name "AC097173.1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 119939540 119964293 . + . gene_id "ENSG00000250392"; gene_version "2"; gene_name "LINC02502"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 119947131 119947232 . + . gene_id "ENSG00000200553"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 120035033 120040615 . - . gene_id "ENSG00000253825"; gene_version "1"; gene_name "AC097173.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 120055608 120067074 . - . gene_id "ENSG00000164109"; gene_version "13"; gene_name "MAD2L1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 120066958 120416766 . + . gene_id "ENSG00000250938"; gene_version "5"; gene_name "AC108866.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 120091046 120092282 . - . gene_id "ENSG00000250219"; gene_version "2"; gene_name "LTV1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 120342056 120342647 . + . gene_id "ENSG00000225665"; gene_version "4"; gene_name "SAR1AP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 120639090 120650796 . + . gene_id "ENSG00000249409"; gene_version "1"; gene_name "AC025741.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 120684919 120922870 . - . gene_id "ENSG00000138738"; gene_version "10"; gene_name "PRDM5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 120810469 120810569 . + . gene_id "ENSG00000212359"; gene_version "1"; gene_name "RNU6-550P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 120895494 120897083 . - . gene_id "ENSG00000251609"; gene_version "2"; gene_name "SETP12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 121035613 121073021 . - . gene_id "ENSG00000173376"; gene_version "13"; gene_name "NDNF"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 121061172 121061478 . - . gene_id "ENSG00000223006"; gene_version "1"; gene_name "RN7SKP137"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 121071429 121080476 . + . gene_id "ENSG00000250344"; gene_version "1"; gene_name "AC105254.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 121118299 121118734 . + . gene_id "ENSG00000271302"; gene_version "1"; gene_name "AC105254.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 121131408 121227466 . - . gene_id "ENSG00000050730"; gene_version "15"; gene_name "TNIP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 121192797 121192903 . - . gene_id "ENSG00000252183"; gene_version "1"; gene_name "RNU6-948P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 121329069 121329170 . - . gene_id "ENSG00000207148"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 121329312 121381059 . - . gene_id "ENSG00000186867"; gene_version "10"; gene_name "QRFPR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 121369433 121370345 . - . gene_id "ENSG00000213480"; gene_version "3"; gene_name "AC093816.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 121451541 121451967 . + . gene_id "ENSG00000224062"; gene_version "4"; gene_name "TUBB4BP5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 121667955 121697113 . - . gene_id "ENSG00000164111"; gene_version "14"; gene_name "ANXA5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 121758930 121765427 . - . gene_id "ENSG00000164112"; gene_version "13"; gene_name "TMEM155"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 121764585 121766814 . + . gene_id "ENSG00000226757"; gene_version "2"; gene_name "PP12613"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 121801317 121817021 . + . gene_id "ENSG00000123737"; gene_version "12"; gene_name "EXOSC9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 121816444 121823933 . - . gene_id "ENSG00000145386"; gene_version "9"; gene_name "CCNA2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 121824440 121870497 . - . gene_id "ENSG00000138686"; gene_version "9"; gene_name "BBS7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 121870583 121872848 . + . gene_id "ENSG00000261501"; gene_version "1"; gene_name "AC079341.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 121879027 121951754 . - . gene_id "ENSG00000138741"; gene_version "10"; gene_name "TRPC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 122077840 122078318 . - . gene_id "ENSG00000237868"; gene_version "1"; gene_name "AC097533.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 122087508 122087811 . - . gene_id "ENSG00000241037"; gene_version "3"; gene_name "RN7SL335P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 122152333 122362758 . + . gene_id "ENSG00000138688"; gene_version "15"; gene_name "KIAA1109"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 122378966 122429802 . + . gene_id "ENSG00000164113"; gene_version "10"; gene_name "ADAD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 122451470 122456725 . - . gene_id "ENSG00000109471"; gene_version "4"; gene_name "IL2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 122610108 122621069 . - . gene_id "ENSG00000138684"; gene_version "8"; gene_name "IL21"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 122618983 122689156 . + . gene_id "ENSG00000227145"; gene_version "1"; gene_name "IL21-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 122728532 122732482 . - . gene_id "ENSG00000224786"; gene_version "2"; gene_name "CETN4P"; gene_source "havana"; gene_biotype "transcribed_unitary_pseudogene"; -chr4 ensembl_havana gene 122732702 122744943 . + . gene_id "ENSG00000181004"; gene_version "9"; gene_name "BBS12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 122815771 122816117 . - . gene_id "ENSG00000244083"; gene_version "1"; gene_name "AC021205.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 122826708 122898236 . + . gene_id "ENSG00000138685"; gene_version "15"; gene_name "FGF2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 122840343 122840690 . + . gene_id "ENSG00000240775"; gene_version "1"; gene_name "AC021205.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 122881878 122884712 . - . gene_id "ENSG00000273007"; gene_version "1"; gene_name "AC021205.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 122888697 122922968 . - . gene_id "ENSG00000170917"; gene_version "13"; gene_name "NUDT6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 122923074 123319450 . + . gene_id "ENSG00000145375"; gene_version "7"; gene_name "SPATA5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 123259949 123260118 . - . gene_id "ENSG00000250322"; gene_version "2"; gene_name "AC026402.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 123396795 123403760 . + . gene_id "ENSG00000164056"; gene_version "10"; gene_name "SPRY1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 123490268 123522106 . + . gene_id "ENSG00000249125"; gene_version "1"; gene_name "AC093821.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 123505279 123527525 . + . gene_id "ENSG00000251526"; gene_version "1"; gene_name "LINC02435"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 123650267 123930406 . + . gene_id "ENSG00000249464"; gene_version "5"; gene_name "LINC01091"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 123744923 123745673 . - . gene_id "ENSG00000226655"; gene_version "1"; gene_name "AC096732.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 123745750 123746226 . - . gene_id "ENSG00000228489"; gene_version "1"; gene_name "RPL21P50"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 123861860 123862015 . - . gene_id "ENSG00000250458"; gene_version "2"; gene_name "AC093767.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 124062462 124062990 . + . gene_id "ENSG00000250484"; gene_version "2"; gene_name "PPIAP76"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 124149377 124252044 . - . gene_id "ENSG00000249837"; gene_version "1"; gene_name "AC121154.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 124435750 124437120 . - . gene_id "ENSG00000248506"; gene_version "1"; gene_name "AC097474.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 124462863 124463790 . - . gene_id "ENSG00000248565"; gene_version "2"; gene_name "TECRP2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 124499942 124558434 . - . gene_id "ENSG00000261083"; gene_version "1"; gene_name "LINC02516"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 124664052 124712732 . - . gene_id "ENSG00000151458"; gene_version "11"; gene_name "ANKRD50"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 125316399 125492932 . + . gene_id "ENSG00000196159"; gene_version "11"; gene_name "FAT4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 125362819 125362929 . + . gene_id "ENSG00000201297"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 mirbase gene 125507259 125507307 . + . gene_id "ENSG00000283550"; gene_version "1"; gene_name "MIR2054"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 125676718 125752793 . + . gene_id "ENSG00000250149"; gene_version "1"; gene_name "AC105919.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 125681177 125683668 . - . gene_id "ENSG00000251436"; gene_version "2"; gene_name "NUP58P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 125723267 125724217 . - . gene_id "ENSG00000249555"; gene_version "2"; gene_name "TMEM248P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 126070708 126072004 . + . gene_id "ENSG00000251649"; gene_version "1"; gene_name "LINC02379"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 126106139 126106923 . - . gene_id "ENSG00000251005"; gene_version "1"; gene_name "AC105758.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 126563509 126564776 . + . gene_id "ENSG00000223620"; gene_version "3"; gene_name "RBM48P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 127028107 127028219 . - . gene_id "ENSG00000199862"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 127043430 127077762 . - . gene_id "ENSG00000250945"; gene_version "1"; gene_name "AC096773.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 127096891 127470569 . - . gene_id "ENSG00000248491"; gene_version "5"; gene_name "AC093772.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 127493505 127493828 . + . gene_id "ENSG00000248209"; gene_version "1"; gene_name "AC097462.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 127498327 127498807 . + . gene_id "ENSG00000249795"; gene_version "1"; gene_name "AC097462.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 127623271 127726737 . + . gene_id "ENSG00000164066"; gene_version "12"; gene_name "INTU"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 127730378 127774299 . + . gene_id "ENSG00000151475"; gene_version "5"; gene_name "SLC25A31"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 127781821 127840733 . + . gene_id "ENSG00000164070"; gene_version "11"; gene_name "HSPA4L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 127809170 127809477 . + . gene_id "ENSG00000282855"; gene_version "1"; gene_name "AC093591.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 127812720 127813200 . - . gene_id "ENSG00000244021"; gene_version "4"; gene_name "AC093591.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 127840198 127844040 . - . gene_id "ENSG00000261668"; gene_version "1"; gene_name "AC093591.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 127880861 127899195 . + . gene_id "ENSG00000142731"; gene_version "10"; gene_name "PLK4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 127891991 127892082 . + . gene_id "ENSG00000251821"; gene_version "1"; gene_name "RNU6-583P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 127917732 127966034 . - . gene_id "ENSG00000164073"; gene_version "10"; gene_name "MFSD8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 127965306 128039927 . + . gene_id "ENSG00000164074"; gene_version "15"; gene_name "ABHD18"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 128061268 128222931 . + . gene_id "ENSG00000138709"; gene_version "18"; gene_name "LARP1B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 128069014 128069612 . - . gene_id "ENSG00000241651"; gene_version "4"; gene_name "AC099340.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 128155389 128156204 . + . gene_id "ENSG00000248394"; gene_version "1"; gene_name "FOSL1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 128269237 128288829 . - . gene_id "ENSG00000164040"; gene_version "16"; gene_name "PGRMC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 128292751 128519394 . + . gene_id "ENSG00000251432"; gene_version "6"; gene_name "AC108062.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 128552590 128553416 . - . gene_id "ENSG00000273077"; gene_version "1"; gene_name "AC110609.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 128567972 128570531 . - . gene_id "ENSG00000248187"; gene_version "1"; gene_name "AC078850.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 128582999 128601407 . - . gene_id "ENSG00000248802"; gene_version "1"; gene_name "AC078850.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 128768228 128769948 . + . gene_id "ENSG00000280711"; gene_version "1"; gene_name "JADRR"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 128809623 128875224 . + . gene_id "ENSG00000077684"; gene_version "15"; gene_name "JADE1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 128864921 129093607 . - . gene_id "ENSG00000151466"; gene_version "11"; gene_name "SCLT1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 128944628 128944956 . + . gene_id "ENSG00000275647"; gene_version "1"; gene_name "AC093783.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 129041766 129041877 . + . gene_id "ENSG00000281369"; gene_version "1"; gene_name "AC093826.2"; gene_source "ensembl"; gene_biotype "pseudogene"; -chr4 ensembl_havana gene 129093317 129116640 . + . gene_id "ENSG00000151470"; gene_version "12"; gene_name "C4orf33"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 129133106 129134098 . + . gene_id "ENSG00000251345"; gene_version "2"; gene_name "AC093826.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 129135926 129139740 . - . gene_id "ENSG00000248958"; gene_version "2"; gene_name "ZSWIM5P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 129177386 129179094 . + . gene_id "ENSG00000251195"; gene_version "1"; gene_name "AC105417.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 129299175 129305022 . - . gene_id "ENSG00000250193"; gene_version "1"; gene_name "AC082650.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 129724171 129771481 . - . gene_id "ENSG00000246876"; gene_version "6"; gene_name "LINC02466"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 129771659 129955368 . + . gene_id "ENSG00000249618"; gene_version "5"; gene_name "LINC02465"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 129903010 129904163 . + . gene_id "ENSG00000234125"; gene_version "5"; gene_name "EEF1GP8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 130376229 130386371 . + . gene_id "ENSG00000251326"; gene_version "1"; gene_name "LINC02479"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 130494673 130495285 . + . gene_id "ENSG00000248877"; gene_version "2"; gene_name "PGBD4P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 130503357 130504344 . - . gene_id "ENSG00000249018"; gene_version "2"; gene_name "GAPDHP56"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 130808507 130811933 . + . gene_id "ENSG00000280059"; gene_version "1"; gene_name "AC093831.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 130881027 130885641 . - . gene_id "ENSG00000250503"; gene_version "1"; gene_name "AC093831.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 131112748 131113255 . + . gene_id "ENSG00000250213"; gene_version "2"; gene_name "AC025554.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 131273242 131273348 . + . gene_id "ENSG00000206782"; gene_version "1"; gene_name "RNU6-224P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 131380013 131541397 . + . gene_id "ENSG00000250102"; gene_version "5"; gene_name "LINC02377"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 131540281 131540489 . + . gene_id "ENSG00000248715"; gene_version "2"; gene_name "AC105424.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 131720260 131720543 . - . gene_id "ENSG00000241392"; gene_version "3"; gene_name "RN7SL205P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 131768140 131768249 . + . gene_id "ENSG00000252014"; gene_version "1"; gene_name "RF00156"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 131768233 131768578 . + . gene_id "ENSG00000249416"; gene_version "2"; gene_name "AC107393.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 131773302 131791482 . + . gene_id "ENSG00000251676"; gene_version "1"; gene_name "SNHG27"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 131857343 131857913 . - . gene_id "ENSG00000184139"; gene_version "8"; gene_name "RPL7AP28"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 131930031 131975952 . - . gene_id "ENSG00000251555"; gene_version "1"; gene_name "AC096711.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 132004810 132124031 . - . gene_id "ENSG00000251598"; gene_version "1"; gene_name "AC096711.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 132027175 132028434 . - . gene_id "ENSG00000249463"; gene_version "1"; gene_name "AC096711.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 132367786 132368479 . - . gene_id "ENSG00000251051"; gene_version "1"; gene_name "ELL2P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 132435802 132447235 . - . gene_id "ENSG00000248369"; gene_version "1"; gene_name "AC114741.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 132591089 132678503 . + . gene_id "ENSG00000251398"; gene_version "1"; gene_name "LINC01256"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 132592084 132592536 . + . gene_id "ENSG00000249038"; gene_version "2"; gene_name "AARSP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 132836772 132981677 . - . gene_id "ENSG00000251488"; gene_version "1"; gene_name "AC115622.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 132985510 132988677 . - . gene_id "ENSG00000249513"; gene_version "2"; gene_name "AC110751.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 133075311 133149116 . - . gene_id "ENSG00000250241"; gene_version "5"; gene_name "AC105383.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 133124104 133126063 . + . gene_id "ENSG00000248735"; gene_version "2"; gene_name "R3HDM2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 133149315 133208606 . + . gene_id "ENSG00000138650"; gene_version "8"; gene_name "PCDH10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 133574566 133575208 . - . gene_id "ENSG00000250191"; gene_version "1"; gene_name "AC105252.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 133871246 134010690 . - . gene_id "ENSG00000251388"; gene_version "1"; gene_name "AC079380.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 134196333 134201748 . - . gene_id "ENSG00000254535"; gene_version "3"; gene_name "PABPC4L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 134255173 134327473 . - . gene_id "ENSG00000251199"; gene_version "5"; gene_name "AC109830.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 134327063 134328798 . + . gene_id "ENSG00000248191"; gene_version "1"; gene_name "PES1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 134423867 134457852 . + . gene_id "ENSG00000251291"; gene_version "1"; gene_name "LINC02462"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 134759399 134817289 . + . gene_id "ENSG00000249000"; gene_version "1"; gene_name "AC093722.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 134932889 134934131 . - . gene_id "ENSG00000249847"; gene_version "1"; gene_name "AC104619.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 134944275 134944523 . + . gene_id "ENSG00000251228"; gene_version "1"; gene_name "AC104619.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 134952259 134952889 . - . gene_id "ENSG00000241411"; gene_version "1"; gene_name "AC104619.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 135045464 135046850 . + . gene_id "ENSG00000250144"; gene_version "1"; gene_name "AC104619.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 135067233 135097658 . + . gene_id "ENSG00000248434"; gene_version "1"; gene_name "AC107463.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 135112905 135123779 . - . gene_id "ENSG00000248456"; gene_version "1"; gene_name "LINC02485"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 135315418 135315522 . - . gene_id "ENSG00000283432"; gene_version "1"; gene_name "RF00026"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 135371177 135371924 . - . gene_id "ENSG00000250834"; gene_version "1"; gene_name "KRT18P54"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 135565117 135567157 . - . gene_id "ENSG00000248104"; gene_version "1"; gene_name "TARS2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 135792384 135805904 . - . gene_id "ENSG00000250865"; gene_version "1"; gene_name "AC105362.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 135866983 135913680 . - . gene_id "ENSG00000248330"; gene_version "5"; gene_name "LINC00613"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 135995929 135996092 . - . gene_id "ENSG00000207322"; gene_version "1"; gene_name "RNU1-89P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 136004509 136004902 . - . gene_id "ENSG00000251492"; gene_version "1"; gene_name "AC104136.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 136097797 136099240 . - . gene_id "ENSG00000261166"; gene_version "1"; gene_name "AC073429.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 136118675 136395471 . - . gene_id "ENSG00000251567"; gene_version "5"; gene_name "AC018680.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 136125909 136138874 . + . gene_id "ENSG00000250665"; gene_version "1"; gene_name "AC073429.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 136355110 136356336 . - . gene_id "ENSG00000249311"; gene_version "4"; gene_name "TERF1P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 136553236 136553739 . + . gene_id "ENSG00000279749"; gene_version "1"; gene_name "AC093875.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 136796722 137212799 . - . gene_id "ENSG00000248869"; gene_version "5"; gene_name "LINC02511"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 137193756 137198367 . + . gene_id "ENSG00000250341"; gene_version "1"; gene_name "LINC02510"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 137301001 137301187 . - . gene_id "ENSG00000250813"; gene_version "1"; gene_name "SERF1AP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 137425426 137425864 . - . gene_id "ENSG00000251440"; gene_version "2"; gene_name "STMN1P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 137448087 137448501 . + . gene_id "ENSG00000213448"; gene_version "3"; gene_name "RPS23P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 137518918 137532494 . - . gene_id "ENSG00000189184"; gene_version "11"; gene_name "PCDH18"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 137545731 137603430 . + . gene_id "ENSG00000251632"; gene_version "1"; gene_name "LINC02172"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 137601899 137602433 . - . gene_id "ENSG00000280352"; gene_version "1"; gene_name "AC116563.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 137645265 137655174 . - . gene_id "ENSG00000250126"; gene_version "1"; gene_name "AC116563.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 137690477 137734977 . - . gene_id "ENSG00000250777"; gene_version "1"; gene_name "AC131956.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 137807706 137816402 . + . gene_id "ENSG00000250034"; gene_version "1"; gene_name "AC131956.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138027422 138130709 . - . gene_id "ENSG00000248307"; gene_version "5"; gene_name "LINC00616"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138057464 138178177 . + . gene_id "ENSG00000250033"; gene_version "5"; gene_name "SLC7A11-AS1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 ensembl_havana gene 138164097 138242349 . - . gene_id "ENSG00000151012"; gene_version "13"; gene_name "SLC7A11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 138277115 138281784 . - . gene_id "ENSG00000249091"; gene_version "1"; gene_name "AC093903.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138298856 138312658 . - . gene_id "ENSG00000248397"; gene_version "1"; gene_name "LINC00498"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138309711 138424344 . + . gene_id "ENSG00000251372"; gene_version "5"; gene_name "LINC00499"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138425523 138436869 . + . gene_id "ENSG00000249381"; gene_version "1"; gene_name "LINC00500"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138481255 138482096 . - . gene_id "ENSG00000248305"; gene_version "1"; gene_name "AC105416.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 138560704 138561941 . + . gene_id "ENSG00000248795"; gene_version "1"; gene_name "AC098859.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 138664725 138665569 . - . gene_id "ENSG00000250977"; gene_version "1"; gene_name "AC098859.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138773550 138801639 . + . gene_id "ENSG00000250501"; gene_version "2"; gene_name "AC093766.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 138819954 139012646 . - . gene_id "ENSG00000250195"; gene_version "1"; gene_name "AC109927.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 138923930 138924232 . - . gene_id "ENSG00000250577"; gene_version "1"; gene_name "AC109927.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 139015789 139045939 . + . gene_id "ENSG00000151014"; gene_version "5"; gene_name "NOCT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 139028112 139177218 . - . gene_id "ENSG00000109381"; gene_version "19"; gene_name "ELF2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 139055475 139055578 . + . gene_id "ENSG00000252503"; gene_version "1"; gene_name "RNU6-531P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 139100377 139100658 . + . gene_id "ENSG00000240723"; gene_version "3"; gene_name "RN7SL382P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 139114930 139115374 . - . gene_id "ENSG00000179967"; gene_version "11"; gene_name "PPP1R14BP3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 139155153 139155444 . + . gene_id "ENSG00000276396"; gene_version "1"; gene_name "RF00017"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 139185441 139185746 . + . gene_id "ENSG00000265892"; gene_version "2"; gene_name "RN7SL311P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 139200395 139200513 . + . gene_id "ENSG00000207384"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl gene 139231026 139231119 . - . gene_id "ENSG00000252362"; gene_version "1"; gene_name "RNU6-506P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 139256657 139256760 . - . gene_id "ENSG00000206722"; gene_version "1"; gene_name "RNU6-1074P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 139266163 139280338 . - . gene_id "ENSG00000137463"; gene_version "4"; gene_name "MGARP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 139266880 139302551 . - . gene_id "ENSG00000109390"; gene_version "11"; gene_name "NDUFC1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 139301455 139420033 . + . gene_id "ENSG00000164134"; gene_version "12"; gene_name "NAA15"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 139318378 139318486 . + . gene_id "ENSG00000200520"; gene_version "1"; gene_name "RNU6-1214P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 139411927 139454034 . - . gene_id "ENSG00000273247"; gene_version "5"; gene_name "AC097376.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 139426299 139430884 . - . gene_id "ENSG00000248863"; gene_version "2"; gene_name "AC097376.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl gene 139436368 139436494 . - . gene_id "ENSG00000239005"; gene_version "1"; gene_name "RF01225"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 139453232 139476609 . + . gene_id "ENSG00000172007"; gene_version "5"; gene_name "RAB33B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 139495941 139606699 . - . gene_id "ENSG00000145391"; gene_version "13"; gene_name "SETD7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 139546266 139546727 . + . gene_id "ENSG00000249302"; gene_version "2"; gene_name "FTH1P24"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 139556799 139557643 . + . gene_id "ENSG00000272717"; gene_version "1"; gene_name "AC112236.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 139618136 139623232 . - . gene_id "ENSG00000261268"; gene_version "1"; gene_name "AC112236.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 139665768 139740745 . + . gene_id "ENSG00000085871"; gene_version "8"; gene_name "MGST2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 139685127 139685427 . - . gene_id "ENSG00000201533"; gene_version "1"; gene_name "RN7SKP237"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 139698144 139698554 . - . gene_id "ENSG00000178458"; gene_version "5"; gene_name "H3F3AP6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 139716753 140154184 . - . gene_id "ENSG00000196782"; gene_version "12"; gene_name "MAML3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 139794125 139794433 . - . gene_id "ENSG00000252233"; gene_version "1"; gene_name "RN7SKP253"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 140128015 140134565 . + . gene_id "ENSG00000250698"; gene_version "1"; gene_name "AC131182.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 140257286 140385726 . + . gene_id "ENSG00000153130"; gene_version "17"; gene_name "SCOC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 140283724 140373381 . - . gene_id "ENSG00000196951"; gene_version "10"; gene_name "SCOC-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 140314163 140314550 . - . gene_id "ENSG00000249754"; gene_version "2"; gene_name "NDUFB4P9"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 140366240 140366861 . - . gene_id "ENSG00000241923"; gene_version "2"; gene_name "RPL14P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 140388455 140427968 . - . gene_id "ENSG00000153132"; gene_version "12"; gene_name "CLGN"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 140442262 140498377 . - . gene_id "ENSG00000205301"; gene_version "11"; gene_name "MGAT4D"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 140498402 140501330 . + . gene_id "ENSG00000280262"; gene_version "1"; gene_name "AC093671.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 140524158 140553770 . + . gene_id "ENSG00000179387"; gene_version "9"; gene_name "ELMOD2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 140559434 140568805 . - . gene_id "ENSG00000109424"; gene_version "3"; gene_name "UCP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 140577925 140578222 . + . gene_id "ENSG00000242102"; gene_version "3"; gene_name "RN7SL152P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 140600401 140600575 . - . gene_id "ENSG00000248621"; gene_version "2"; gene_name "AC108019.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 140620765 140756120 . - . gene_id "ENSG00000109436"; gene_version "7"; gene_name "TBC1D9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 140641840 140645489 . - . gene_id "ENSG00000249661"; gene_version "1"; gene_name "TNRC18P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 140700835 140700942 . - . gene_id "ENSG00000207155"; gene_version "1"; gene_name "RNY1P14"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 140712168 140716081 . + . gene_id "ENSG00000248335"; gene_version "1"; gene_name "AC096733.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 140756528 140757921 . + . gene_id "ENSG00000273472"; gene_version "1"; gene_name "AC096733.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 140779039 140779141 . - . gene_id "ENSG00000222613"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 140859807 141212877 . - . gene_id "ENSG00000170153"; gene_version "10"; gene_name "RNF150"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 141220887 141234697 . + . gene_id "ENSG00000109445"; gene_version "10"; gene_name "ZNF330"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 141240739 141278789 . - . gene_id "ENSG00000248747"; gene_version "1"; gene_name "AC107220.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 141319450 141332618 . - . gene_id "ENSG00000248810"; gene_version "1"; gene_name "LINC02432"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 141405172 141407586 . + . gene_id "ENSG00000250189"; gene_version "2"; gene_name "AC097504.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 141430831 141431284 . + . gene_id "ENSG00000272632"; gene_version "1"; gene_name "AC097504.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 141569931 141576077 . - . gene_id "ENSG00000250141"; gene_version "1"; gene_name "LINC02276"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 141636599 141733987 . + . gene_id "ENSG00000164136"; gene_version "16"; gene_name "IL15"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 142023160 142847432 . - . gene_id "ENSG00000109452"; gene_version "12"; gene_name "INPP4B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 142286917 142287625 . - . gene_id "ENSG00000242134"; gene_version "2"; gene_name "RPL5P13"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 142317238 142317546 . + . gene_id "ENSG00000250835"; gene_version "1"; gene_name "LSM3P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 142514446 142518983 . + . gene_id "ENSG00000251248"; gene_version "1"; gene_name "AC139720.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 142566019 142660950 . + . gene_id "ENSG00000249806"; gene_version "1"; gene_name "AC139720.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 142933195 143184861 . - . gene_id "ENSG00000250326"; gene_version "1"; gene_name "AC104596.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 143045086 143045878 . + . gene_id "ENSG00000251300"; gene_version "1"; gene_name "AC104596.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 143184917 143223830 . + . gene_id "ENSG00000170185"; gene_version "9"; gene_name "USP38"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 143286293 143329858 . + . gene_id "ENSG00000250969"; gene_version "1"; gene_name "AC097658.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 143309466 143309566 . + . gene_id "ENSG00000200049"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 143336762 143474568 . + . gene_id "ENSG00000109458"; gene_version "8"; gene_name "GAB1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 143343460 143343535 . + . gene_id "ENSG00000265623"; gene_version "1"; gene_name "MIR3139"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 143349275 143350117 . - . gene_id "ENSG00000228981"; gene_version "3"; gene_name "AC097658.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 143424753 143426013 . + . gene_id "ENSG00000243175"; gene_version "1"; gene_name "RPSAP36"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 143497412 143498126 . - . gene_id "ENSG00000250540"; gene_version "1"; gene_name "AC104685.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 143513463 143557486 . + . gene_id "ENSG00000153147"; gene_version "5"; gene_name "SMARCA5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 143513472 143514635 . - . gene_id "ENSG00000245112"; gene_version "2"; gene_name "SMARCA5-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 143555082 143555583 . - . gene_id "ENSG00000248924"; gene_version "2"; gene_name "AC139713.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 143559457 144188367 . + . gene_id "ENSG00000251600"; gene_version "6"; gene_name "AC139713.2"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 143559472 143561460 . + . gene_id "ENSG00000236296"; gene_version "8"; gene_name "GUSBP5"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 143577302 143700675 . - . gene_id "ENSG00000183090"; gene_version "5"; gene_name "FREM3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 143760399 143762093 . - . gene_id "ENSG00000250345"; gene_version "2"; gene_name "AC104090.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 143870867 143905563 . - . gene_id "ENSG00000197465"; gene_version "13"; gene_name "GYPE"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 143911514 143912053 . - . gene_id "ENSG00000249741"; gene_version "2"; gene_name "AC093890.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 143996104 144019345 . - . gene_id "ENSG00000250361"; gene_version "8"; gene_name "GYPB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 144109303 144140786 . - . gene_id "ENSG00000170180"; gene_version "21"; gene_name "GYPA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 144111039 144870953 . - . gene_id "ENSG00000285783"; gene_version "1"; gene_name "AC098588.2"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 havana gene 144210701 145098174 . - . gene_id "ENSG00000285713"; gene_version "1"; gene_name "AC098588.1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 144505900 144509001 . + . gene_id "ENSG00000261129"; gene_version "1"; gene_name "AC106871.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 144572238 144572983 . + . gene_id "ENSG00000250504"; gene_version "2"; gene_name "KRT18P51"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 144642922 144661357 . - . gene_id "ENSG00000248890"; gene_version "1"; gene_name "HHIP-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 144646021 144745271 . + . gene_id "ENSG00000164161"; gene_version "9"; gene_name "HHIP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 144739762 144739941 . - . gene_id "ENSG00000273621"; gene_version "1"; gene_name "RF02271"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 144831908 145098541 . - . gene_id "ENSG00000164162"; gene_version "13"; gene_name "ANAPC10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 144845625 144847344 . + . gene_id "ENSG00000249193"; gene_version "1"; gene_name "HSPD1P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 144851572 144874787 . + . gene_id "ENSG00000250406"; gene_version "1"; gene_name "AC109811.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 144920713 144921164 . - . gene_id "ENSG00000251452"; gene_version "2"; gene_name "AC109811.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 145035132 145035436 . + . gene_id "ENSG00000222594"; gene_version "1"; gene_name "RN7SKP235"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 145097932 145129179 . + . gene_id "ENSG00000164163"; gene_version "10"; gene_name "ABCE1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 145110838 145180161 . - . gene_id "ENSG00000164164"; gene_version "16"; gene_name "OTUD4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 145149537 145149649 . - . gene_id "ENSG00000238713"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 145269810 145270558 . - . gene_id "ENSG00000240992"; gene_version "1"; gene_name "RPS23P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 145335263 145340421 . - . gene_id "ENSG00000272727"; gene_version "1"; gene_name "LINC02266"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 145375543 145376253 . + . gene_id "ENSG00000251333"; gene_version "3"; gene_name "RTN3P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 145376909 145377957 . + . gene_id "ENSG00000278943"; gene_version "1"; gene_name "AC079228.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 145456005 145456844 . + . gene_id "ENSG00000248745"; gene_version "2"; gene_name "NMNAT1P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 145481194 145558079 . + . gene_id "ENSG00000170365"; gene_version "9"; gene_name "SMAD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 145497073 145502971 . - . gene_id "ENSG00000250582"; gene_version "1"; gene_name "SMAD1-AS2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 145514615 145517118 . - . gene_id "ENSG00000250902"; gene_version "1"; gene_name "SMAD1-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 145599042 145660035 . + . gene_id "ENSG00000151611"; gene_version "14"; gene_name "MMAA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 145624159 145626035 . - . gene_id "ENSG00000249245"; gene_version "2"; gene_name "NCOA4P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 145642336 145650624 . - . gene_id "ENSG00000248356"; gene_version "1"; gene_name "AC093864.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 145680115 145771032 . + . gene_id "ENSG00000237136"; gene_version "7"; gene_name "C4orf51"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 145757627 145938635 . - . gene_id "ENSG00000151612"; gene_version "15"; gene_name "ZNF827"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 145830456 145832980 . - . gene_id "ENSG00000279481"; gene_version "1"; gene_name "AC104791.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 145833118 145839580 . + . gene_id "ENSG00000251687"; gene_version "1"; gene_name "AC104791.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 145958128 145958240 . - . gene_id "ENSG00000201314"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 146052604 146056762 . - . gene_id "ENSG00000260303"; gene_version "1"; gene_name "AC108206.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 146077846 146108157 . - . gene_id "ENSG00000251024"; gene_version "1"; gene_name "AC097372.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 146109455 146121913 . - . gene_id "ENSG00000248809"; gene_version "5"; gene_name "LINC01095"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 146175685 146200000 . + . gene_id "ENSG00000164167"; gene_version "11"; gene_name "LSM6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 146180851 146181316 . + . gene_id "ENSG00000279845"; gene_version "1"; gene_name "AC097372.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 146214515 146230878 . + . gene_id "ENSG00000250673"; gene_version "2"; gene_name "REELD1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 146231892 146232267 . + . gene_id "ENSG00000280250"; gene_version "1"; gene_name "AC097372.4"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 146241806 146243669 . + . gene_id "ENSG00000251010"; gene_version "1"; gene_name "AC097372.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 146253975 146521964 . - . gene_id "ENSG00000120519"; gene_version "14"; gene_name "SLC10A7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 146408583 146408688 . + . gene_id "ENSG00000278438"; gene_version "1"; gene_name "MIR7849"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 146580048 146580210 . + . gene_id "ENSG00000207182"; gene_version "1"; gene_name "RNU1-44P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 146638893 146642474 . + . gene_id "ENSG00000151615"; gene_version "3"; gene_name "POU4F2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 146706638 146945882 . - . gene_id "ENSG00000137473"; gene_version "17"; gene_name "TTC29"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 146934001 146945471 . + . gene_id "ENSG00000248764"; gene_version "1"; gene_name "AC092435.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 146957438 146975457 . + . gene_id "ENSG00000248346"; gene_version "1"; gene_name "AC092435.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 147005492 147009145 . + . gene_id "ENSG00000260090"; gene_version "1"; gene_name "AC092435.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 147025914 147030072 . + . gene_id "ENSG00000279376"; gene_version "1"; gene_name "AC092435.4"; gene_source "havana"; gene_biotype "TEC"; -chr4 mirbase gene 147344629 147344717 . - . gene_id "ENSG00000221369"; gene_version "1"; gene_name "MIR548G"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 147425974 147426351 . - . gene_id "ENSG00000241281"; gene_version "1"; gene_name "AC010683.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 147458724 147459321 . - . gene_id "ENSG00000249004"; gene_version "1"; gene_name "PRMT5P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 147480917 147544954 . + . gene_id "ENSG00000151617"; gene_version "16"; gene_name "EDNRA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 147487971 147496062 . + . gene_id "ENSG00000280219"; gene_version "1"; gene_name "AC093908.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 147506091 147506765 . + . gene_id "ENSG00000251254"; gene_version "1"; gene_name "GTF2F2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 147567606 147594587 . + . gene_id "ENSG00000251688"; gene_version "1"; gene_name "LINC02507"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 147609552 147617245 . - . gene_id "ENSG00000251298"; gene_version "1"; gene_name "AC093835.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 147617383 147672044 . + . gene_id "ENSG00000164168"; gene_version "7"; gene_name "TMEM184C"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 147637785 147684230 . - . gene_id "ENSG00000164169"; gene_version "12"; gene_name "PRMT9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 147732063 148072780 . + . gene_id "ENSG00000071205"; gene_version "11"; gene_name "ARHGAP10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 147745303 147745417 . - . gene_id "ENSG00000252951"; gene_version "1"; gene_name "RNA5SP165"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 mirbase gene 147782595 147782668 . + . gene_id "ENSG00000264274"; gene_version "1"; gene_name "MIR4799"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 147808926 147809209 . + . gene_id "ENSG00000240014"; gene_version "3"; gene_name "RN7SL254P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 147916529 147917386 . - . gene_id "ENSG00000270387"; gene_version "1"; gene_name "AC115621.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 148078762 148444698 . - . gene_id "ENSG00000151623"; gene_version "14"; gene_name "NR3C2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 148146471 148208880 . + . gene_id "ENSG00000250354"; gene_version "1"; gene_name "AC069272.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 148526493 148527139 . - . gene_id "ENSG00000251418"; gene_version "2"; gene_name "ASS1P8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 148557947 148558048 . + . gene_id "ENSG00000201846"; gene_version "1"; gene_name "RNA5SP166"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 148693032 148694323 . + . gene_id "ENSG00000250357"; gene_version "1"; gene_name "AC108935.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 148703526 148703832 . - . gene_id "ENSG00000225176"; gene_version "2"; gene_name "ATP5MGP4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 148819351 148819956 . - . gene_id "ENSG00000279016"; gene_version "1"; gene_name "AC093648.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 148940941 148942378 . - . gene_id "ENSG00000249317"; gene_version "1"; gene_name "AC002460.1"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 ensembl gene 148991572 148991633 . - . gene_id "ENSG00000239168"; gene_version "1"; gene_name "RNU7-197P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 149027445 149062522 . - . gene_id "ENSG00000249752"; gene_version "1"; gene_name "AC108156.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 149147802 149149780 . - . gene_id "ENSG00000250252"; gene_version "1"; gene_name "LINC02430"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 149154295 149278123 . + . gene_id "ENSG00000248210"; gene_version "1"; gene_name "LINC02355"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 149351903 149896233 . - . gene_id "ENSG00000234828"; gene_version "8"; gene_name "IQCM"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 149666057 149711149 . + . gene_id "ENSG00000250905"; gene_version "1"; gene_name "AC093893.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 149789952 149790303 . + . gene_id "ENSG00000251482"; gene_version "1"; gene_name "AKIRIN2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 149907560 149907675 . + . gene_id "ENSG00000202331"; gene_version "1"; gene_name "RNA5SP167"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl gene 149934376 149934483 . + . gene_id "ENSG00000207121"; gene_version "1"; gene_name "RNU6-1230P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 149956208 149958572 . + . gene_id "ENSG00000250704"; gene_version "1"; gene_name "AC105343.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 150078274 150257457 . + . gene_id "ENSG00000170390"; gene_version "15"; gene_name "DCLK2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 150209706 150209768 . + . gene_id "ENSG00000238721"; gene_version "1"; gene_name "RNU7-194P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 150264531 151015727 . - . gene_id "ENSG00000198589"; gene_version "11"; gene_name "LRBA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 150422645 150423642 . - . gene_id "ENSG00000248521"; gene_version "1"; gene_name "AC092612.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 150579089 150581545 . + . gene_id "ENSG00000249690"; gene_version "1"; gene_name "AC110813.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 150581922 150584693 . + . gene_id "ENSG00000181541"; gene_version "5"; gene_name "MAB21L2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 150720981 150721478 . + . gene_id "ENSG00000183432"; gene_version "6"; gene_name "ZBTB8OSP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 150970671 150970782 . - . gene_id "ENSG00000252451"; gene_version "1"; gene_name "RNA5SP168"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 151027090 151027617 . + . gene_id "ENSG00000235606"; gene_version "3"; gene_name "AK4P6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 151099573 151104652 . + . gene_id "ENSG00000145425"; gene_version "9"; gene_name "RPS3A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 151102057 151102128 . + . gene_id "ENSG00000201264"; gene_version "1"; gene_name "SNORD73B"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 151102751 151325632 . - . gene_id "ENSG00000109686"; gene_version "17"; gene_name "SH3D19"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 151103827 151103891 . + . gene_id "ENSG00000208797"; gene_version "1"; gene_name "SNORD73A"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 151139991 151141103 . + . gene_id "ENSG00000270681"; gene_version "1"; gene_name "AC095055.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 151259503 151262849 . + . gene_id "ENSG00000249012"; gene_version "2"; gene_name "AC104819.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 151277171 151291453 . + . gene_id "ENSG00000189099"; gene_version "11"; gene_name "PRSS48"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 151279030 151279192 . - . gene_id "ENSG00000250350"; gene_version "1"; gene_name "AC104819.2"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl gene 151300518 151300613 . + . gene_id "ENSG00000252544"; gene_version "1"; gene_name "RNU6-1282P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 151333775 151353224 . - . gene_id "ENSG00000270265"; gene_version "1"; gene_name "AC104819.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 151407551 151408835 . - . gene_id "ENSG00000251611"; gene_version "1"; gene_name "FAM160A1-DT"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 151409216 151663632 . + . gene_id "ENSG00000164142"; gene_version "15"; gene_name "FAM160A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 151576766 151576916 . + . gene_id "ENSG00000253019"; gene_version "1"; gene_name "RN7SKP35"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 151667224 151670502 . + . gene_id "ENSG00000251603"; gene_version "1"; gene_name "AC092611.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 151669786 151670503 . + . gene_id "ENSG00000278978"; gene_version "1"; gene_name "AC092611.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 151670504 151761023 . - . gene_id "ENSG00000059691"; gene_version "11"; gene_name "GATB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 151674483 151677893 . + . gene_id "ENSG00000251455"; gene_version "1"; gene_name "AC092611.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 151799500 151801348 . + . gene_id "ENSG00000249184"; gene_version "1"; gene_name "AC107074.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 151887543 151891263 . - . gene_id "ENSG00000249708"; gene_version "1"; gene_name "AC112242.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 151904932 151928648 . - . gene_id "ENSG00000249818"; gene_version "1"; gene_name "AC097375.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 151919468 151943933 . + . gene_id "ENSG00000248991"; gene_version "1"; gene_name "AC097375.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 151955991 151969381 . + . gene_id "ENSG00000251249"; gene_version "1"; gene_name "AC097375.3"; gene_source "havana"; gene_biotype "processed_transcript"; -chr4 ensembl gene 151971497 151971613 . - . gene_id "ENSG00000253077"; gene_version "1"; gene_name "RNA5SP169"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 152100754 152104720 . + . gene_id "ENSG00000245954"; gene_version "6"; gene_name "LINC02273"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 152146385 152178573 . - . gene_id "ENSG00000250706"; gene_version "1"; gene_name "AC079340.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 152207421 152225870 . - . gene_id "ENSG00000251377"; gene_version "1"; gene_name "AC079340.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 152264150 152264445 . - . gene_id "ENSG00000244544"; gene_version "2"; gene_name "RN7SL446P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 152308283 152309983 . - . gene_id "ENSG00000270302"; gene_version "1"; gene_name "AC080078.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 152317902 152318364 . - . gene_id "ENSG00000270883"; gene_version "1"; gene_name "AC080078.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 152320544 152536063 . - . gene_id "ENSG00000109670"; gene_version "14"; gene_name "FBXW7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 152337655 152338098 . + . gene_id "ENSG00000270751"; gene_version "1"; gene_name "FBXW7-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 mirbase gene 152489327 152489416 . - . gene_id "ENSG00000264678"; gene_version "1"; gene_name "MIR3140"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 152536264 152539263 . + . gene_id "ENSG00000268471"; gene_version "6"; gene_name "MIR4453HG"; gene_source "havana"; gene_biotype "bidirectional_promoter_lncRNA"; -chr4 mirbase gene 152536428 152536516 . + . gene_id "ENSG00000283792"; gene_version "1"; gene_name "MIR4453"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 152551277 152552364 . - . gene_id "ENSG00000243417"; gene_version "1"; gene_name "AC023424.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 152613875 152614333 . - . gene_id "ENSG00000240669"; gene_version "1"; gene_name "AC023424.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 152618632 152680165 . - . gene_id "ENSG00000170006"; gene_version "11"; gene_name "TMEM154"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 152666368 152670107 . + . gene_id "ENSG00000248571"; gene_version "1"; gene_name "AC106882.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 152769354 152779764 . - . gene_id "ENSG00000169989"; gene_version "2"; gene_name "TIGD4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 152779937 152918463 . + . gene_id "ENSG00000164144"; gene_version "15"; gene_name "ARFIP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 152796063 152796831 . - . gene_id "ENSG00000250980"; gene_version "1"; gene_name "AC113155.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 152927446 152928207 . + . gene_id "ENSG00000231841"; gene_version "1"; gene_name "FAM192BP"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 152936352 152979696 . + . gene_id "ENSG00000137460"; gene_version "8"; gene_name "FHDC1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 153034211 153091165 . + . gene_id "ENSG00000249022"; gene_version "1"; gene_name "AC093599.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 153152342 153339320 . + . gene_id "ENSG00000109654"; gene_version "14"; gene_name "TRIM2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 153265662 153265755 . - . gene_id "ENSG00000252030"; gene_version "1"; gene_name "RNU6-1196P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 153266909 153267010 . - . gene_id "ENSG00000201786"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 153307792 153308717 . - . gene_id "ENSG00000213406"; gene_version "3"; gene_name "ANXA2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 153344649 153415118 . + . gene_id "ENSG00000121211"; gene_version "7"; gene_name "MND1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 153381729 153382015 . - . gene_id "ENSG00000243883"; gene_version "3"; gene_name "RN7SL419P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 153466346 153636711 . + . gene_id "ENSG00000121210"; gene_version "15"; gene_name "TMEM131L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 153640168 153681180 . + . gene_id "ENSG00000250771"; gene_version "2"; gene_name "AC106865.1"; gene_source "havana"; gene_biotype "transcribed_unprocessed_pseudogene"; -chr4 havana gene 153658572 153659653 . + . gene_id "ENSG00000248208"; gene_version "1"; gene_name "WDR45P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 153684070 153705702 . + . gene_id "ENSG00000137462"; gene_version "7"; gene_name "TLR2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 153710125 153760235 . - . gene_id "ENSG00000145428"; gene_version "14"; gene_name "RNF175"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 153720327 153727722 . + . gene_id "ENSG00000249309"; gene_version "1"; gene_name "AC020703.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 153780592 153789120 . - . gene_id "ENSG00000145423"; gene_version "4"; gene_name "SFRP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 154142122 154298819 . + . gene_id "ENSG00000280241"; gene_version "3"; gene_name "AC079298.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 154231742 154495570 . - . gene_id "ENSG00000197410"; gene_version "13"; gene_name "DCHS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 154235980 154237598 . + . gene_id "ENSG00000278981"; gene_version "1"; gene_name "AC079298.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 154261735 154262193 . + . gene_id "ENSG00000280005"; gene_version "1"; gene_name "AC079298.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 154373886 154374347 . + . gene_id "ENSG00000249200"; gene_version "1"; gene_name "AC110775.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 154523487 154524807 . + . gene_id "ENSG00000250609"; gene_version "1"; gene_name "AC110753.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 154535006 154550435 . - . gene_id "ENSG00000171566"; gene_version "11"; gene_name "PLRG1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 154543933 154544037 . - . gene_id "ENSG00000200350"; gene_version "1"; gene_name "RNU6-1285P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 154555208 154555985 . + . gene_id "ENSG00000248611"; gene_version "1"; gene_name "AC107385.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 154562956 154571086 . + . gene_id "ENSG00000171564"; gene_version "11"; gene_name "FGB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 154583126 154590766 . - . gene_id "ENSG00000171560"; gene_version "14"; gene_name "FGA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 154604134 154612967 . - . gene_id "ENSG00000171557"; gene_version "16"; gene_name "FGG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 154626945 154753118 . + . gene_id "ENSG00000121207"; gene_version "11"; gene_name "LRAT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 154724586 154724880 . + . gene_id "ENSG00000249074"; gene_version "1"; gene_name "NDUFB2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 154754756 154781873 . - . gene_id "ENSG00000249041"; gene_version "1"; gene_name "AC009567.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 154770568 154770916 . + . gene_id "ENSG00000249692"; gene_version "1"; gene_name "AC009567.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 154781213 154828813 . + . gene_id "ENSG00000151962"; gene_version "7"; gene_name "RBM46"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 154787118 154787278 . + . gene_id "ENSG00000222582"; gene_version "1"; gene_name "RNU2-66P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 154790291 154790484 . + . gene_id "ENSG00000252604"; gene_version "1"; gene_name "RNU2-44P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 155173716 155381694 . + . gene_id "ENSG00000250910"; gene_version "7"; gene_name "AC097467.3"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 155206529 155209027 . - . gene_id "ENSG00000250538"; gene_version "5"; gene_name "AC104407.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 155208629 155217078 . + . gene_id "ENSG00000185149"; gene_version "5"; gene_name "NPY2R"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 155286162 155287136 . - . gene_id "ENSG00000249924"; gene_version "2"; gene_name "AC097467.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 155342658 155376970 . - . gene_id "ENSG00000164114"; gene_version "18"; gene_name "MAP9"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 155381042 155381239 . - . gene_id "ENSG00000250205"; gene_version "1"; gene_name "YWHAEP4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 155383107 155384102 . - . gene_id "ENSG00000250398"; gene_version "1"; gene_name "AC097467.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 155385352 155385492 . + . gene_id "ENSG00000271606"; gene_version "1"; gene_name "AC097467.4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155451617 155452405 . - . gene_id "ENSG00000249247"; gene_version "1"; gene_name "MTCYBP17"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155452526 155453044 . + . gene_id "ENSG00000249770"; gene_version "1"; gene_name "MTND6P17"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155453049 155454803 . - . gene_id "ENSG00000248748"; gene_version "1"; gene_name "MTND5P9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155455050 155456411 . - . gene_id "ENSG00000248548"; gene_version "1"; gene_name "MTND4P8"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155456638 155456981 . - . gene_id "ENSG00000249127"; gene_version "1"; gene_name "MTND3P3"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155457180 155457960 . - . gene_id "ENSG00000249698"; gene_version "1"; gene_name "MTCO3P9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155457961 155458640 . - . gene_id "ENSG00000248420"; gene_version "1"; gene_name "MTATP6P9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155458870 155459563 . - . gene_id "ENSG00000249386"; gene_version "1"; gene_name "MTCO2P9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155459704 155461237 . - . gene_id "ENSG00000251223"; gene_version "1"; gene_name "MTCO1P9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155461633 155462663 . - . gene_id "ENSG00000248907"; gene_version "1"; gene_name "MTND2P33"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155462873 155463823 . - . gene_id "ENSG00000251407"; gene_version "1"; gene_name "MTND1P22"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 155515727 155517459 . + . gene_id "ENSG00000251244"; gene_version "1"; gene_name "AC107208.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 155666711 155732349 . + . gene_id "ENSG00000164116"; gene_version "16"; gene_name "GUCY1A1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 155734448 155737062 . + . gene_id "ENSG00000260244"; gene_version "1"; gene_name "AC104083.1"; gene_source "havana"; gene_biotype "sense_overlapping"; -chr4 ensembl_havana gene 155758992 155807591 . + . gene_id "ENSG00000061918"; gene_version "12"; gene_name "GUCY1B1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 155829729 155866273 . - . gene_id "ENSG00000256394"; gene_version "2"; gene_name "ASIC5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 155854738 155920406 . + . gene_id "ENSG00000151790"; gene_version "8"; gene_name "TDO2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 155924118 155953917 . - . gene_id "ENSG00000256043"; gene_version "2"; gene_name "CTSO"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 156006478 156006988 . + . gene_id "ENSG00000249013"; gene_version "1"; gene_name "FTH1P21"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 156585979 156590039 . + . gene_id "ENSG00000251511"; gene_version "1"; gene_name "AC096736.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 156634494 156642454 . - . gene_id "ENSG00000251283"; gene_version "1"; gene_name "LINC02272"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 156642580 156643569 . + . gene_id "ENSG00000249479"; gene_version "1"; gene_name "AC096736.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 156686664 156692636 . + . gene_id "ENSG00000248912"; gene_version "1"; gene_name "AC096736.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 156760454 156971394 . - . gene_id "ENSG00000145431"; gene_version "10"; gene_name "PDGFC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 156841359 156842236 . + . gene_id "ENSG00000248629"; gene_version "1"; gene_name "AC092608.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 156876435 156876820 . + . gene_id "ENSG00000280284"; gene_version "1"; gene_name "AC092608.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 156886645 156886862 . + . gene_id "ENSG00000278880"; gene_version "1"; gene_name "AC092608.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 156972631 156972956 . + . gene_id "ENSG00000250622"; gene_version "1"; gene_name "AC093325.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 156986372 156986693 . - . gene_id "ENSG00000252350"; gene_version "1"; gene_name "RPPH1-3P"; gene_source "ensembl"; gene_biotype "ribozyme"; -chr4 ensembl gene 157064557 157064663 . + . gene_id "ENSG00000252524"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 157076057 157172090 . + . gene_id "ENSG00000109738"; gene_version "10"; gene_name "GLRB"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 157201562 157201668 . - . gene_id "ENSG00000199859"; gene_version "1"; gene_name "RNU6-582P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 157204182 157366075 . + . gene_id "ENSG00000120251"; gene_version "19"; gene_name "GRIA2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 157204462 157204855 . - . gene_id "ENSG00000249819"; gene_version "1"; gene_name "AC112240.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 157572490 157576154 . + . gene_id "ENSG00000234111"; gene_version "6"; gene_name "LINC02433"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 157637687 157667044 . + . gene_id "ENSG00000249275"; gene_version "1"; gene_name "AC093817.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 157768013 157768113 . - . gene_id "ENSG00000200521"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 157815010 157815480 . + . gene_id "ENSG00000249627"; gene_version "1"; gene_name "AC017037.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 157818101 157818572 . - . gene_id "ENSG00000279703"; gene_version "1"; gene_name "AC017037.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 157945817 157946642 . - . gene_id "ENSG00000279994"; gene_version "1"; gene_name "AC017037.4"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 157968412 157969615 . - . gene_id "ENSG00000250475"; gene_version "1"; gene_name "AC017037.2"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 158109500 158110153 . - . gene_id "ENSG00000279139"; gene_version "1"; gene_name "AC098679.3"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 158111361 158111931 . - . gene_id "ENSG00000280140"; gene_version "1"; gene_name "AC098679.4"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 158124474 158173318 . - . gene_id "ENSG00000164125"; gene_version "15"; gene_name "FAM198B"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 158170752 158202877 . + . gene_id "ENSG00000248429"; gene_version "5"; gene_name "FAM198B-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 158182825 158183393 . + . gene_id "ENSG00000251073"; gene_version "1"; gene_name "NUDT19P5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 158199105 158200442 . - . gene_id "ENSG00000250604"; gene_version "1"; gene_name "AC098679.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 158201604 158255411 . + . gene_id "ENSG00000164124"; gene_version "10"; gene_name "TMEM144"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 158270378 158278676 . + . gene_id "ENSG00000251429"; gene_version "1"; gene_name "AC098679.2"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 ensembl_havana gene 158315311 158653372 . + . gene_id "ENSG00000171509"; gene_version "15"; gene_name "RXFP1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 158395394 158395534 . + . gene_id "ENSG00000199634"; gene_version "1"; gene_name "RNU4-79P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 158469586 158470702 . + . gene_id "ENSG00000248387"; gene_version "1"; gene_name "AC121161.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 158490766 158509908 . - . gene_id "ENSG00000249901"; gene_version "1"; gene_name "AC121161.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 158666679 158672255 . - . gene_id "ENSG00000205208"; gene_version "4"; gene_name "C4orf46"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 158672125 158709623 . + . gene_id "ENSG00000171503"; gene_version "11"; gene_name "ETFDH"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 158700691 158700909 . + . gene_id "ENSG00000271817"; gene_version "2"; gene_name "RF00012"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 158709134 158723396 . - . gene_id "ENSG00000171497"; gene_version "4"; gene_name "PPID"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 158769138 158908049 . + . gene_id "ENSG00000052795"; gene_version "12"; gene_name "FNIP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 158794590 158794696 . - . gene_id "ENSG00000206703"; gene_version "1"; gene_name "RNU6-128P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 158893134 159038760 . - . gene_id "ENSG00000164123"; gene_version "6"; gene_name "C4orf45"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 158909373 158909450 . - . gene_id "ENSG00000274535"; gene_version "1"; gene_name "RF00157"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 159007119 159007835 . + . gene_id "ENSG00000248988"; gene_version "1"; gene_name "AC093700.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 159026139 159026527 . + . gene_id "ENSG00000249367"; gene_version "1"; gene_name "FABP5P12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 159064297 159064398 . - . gene_id "ENSG00000206978"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 159103013 159360174 . + . gene_id "ENSG00000109756"; gene_version "9"; gene_name "RAPGEF2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 159128802 159128894 . - . gene_id "ENSG00000264105"; gene_version "1"; gene_name "MIR3688-1"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 mirbase gene 159128805 159128891 . + . gene_id "ENSG00000283379"; gene_version "1"; gene_name "MIR3688-2"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 159375099 159375322 . - . gene_id "ENSG00000248552"; gene_version "1"; gene_name "AC074344.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 159398533 159401246 . + . gene_id "ENSG00000250180"; gene_version "1"; gene_name "AC074344.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 159666503 159777784 . - . gene_id "ENSG00000250488"; gene_version "1"; gene_name "LINC02233"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 160521829 160522311 . - . gene_id "ENSG00000250997"; gene_version "1"; gene_name "AC093853.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 160539254 160586817 . + . gene_id "ENSG00000249425"; gene_version "1"; gene_name "LINC02477"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 160818422 160818869 . + . gene_id "ENSG00000242635"; gene_version "2"; gene_name "RPS14P7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 161378953 161388417 . + . gene_id "ENSG00000249568"; gene_version "1"; gene_name "AC104793.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 161383897 162164035 . - . gene_id "ENSG00000168843"; gene_version "13"; gene_name "FSTL5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 162022733 162047567 . + . gene_id "ENSG00000249419"; gene_version "1"; gene_name "AC023136.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 162322188 162323907 . + . gene_id "ENSG00000251253"; gene_version "1"; gene_name "MTHFD2P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 162521682 162522041 . + . gene_id "ENSG00000248396"; gene_version "1"; gene_name "TOMM22P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 162740668 162742048 . + . gene_id "ENSG00000248431"; gene_version "1"; gene_name "AC005150.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 162984795 162985416 . + . gene_id "ENSG00000251123"; gene_version "1"; gene_name "AC084752.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 163093574 163093628 . - . gene_id "ENSG00000283468"; gene_version "1"; gene_name "MIR4454"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 163108785 163119965 . + . gene_id "ENSG00000250027"; gene_version "1"; gene_name "AC022272.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 163110073 163166921 . - . gene_id "ENSG00000145414"; gene_version "8"; gene_name "NAF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 163265575 163266583 . - . gene_id "ENSG00000250547"; gene_version "1"; gene_name "AC079238.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 163323961 163344832 . - . gene_id "ENSG00000164128"; gene_version "6"; gene_name "NPY1R"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 163343939 163351934 . + . gene_id "ENSG00000164129"; gene_version "11"; gene_name "NPY5R"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 163382179 163382516 . + . gene_id "ENSG00000227283"; gene_version "1"; gene_name "RPL35AP12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 163471093 163473746 . - . gene_id "ENSG00000151005"; gene_version "4"; gene_name "TKTL2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 163494442 163520539 . + . gene_id "ENSG00000198498"; gene_version "9"; gene_name "TMA16"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 163524298 164384050 . - . gene_id "ENSG00000145416"; gene_version "13"; gene_name "MARCH1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 163529771 163530697 . + . gene_id "ENSG00000273449"; gene_version "1"; gene_name "AC093788.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 163828800 163829113 . - . gene_id "ENSG00000253001"; gene_version "1"; gene_name "RN7SKP105"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 163932526 163933182 . + . gene_id "ENSG00000177803"; gene_version "7"; gene_name "AC112247.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164188311 164190367 . + . gene_id "ENSG00000250746"; gene_version "1"; gene_name "AC105250.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 164197007 164197711 . - . gene_id "ENSG00000248546"; gene_version "3"; gene_name "ANP32C"; gene_source "ensembl_havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164597719 164597976 . + . gene_id "ENSG00000251162"; gene_version "1"; gene_name "AC074198.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 164620732 164620837 . + . gene_id "ENSG00000223037"; gene_version "1"; gene_name "RNU6-284P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 164725310 164726706 . + . gene_id "ENSG00000248162"; gene_version "1"; gene_name "AC074198.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164754064 164803795 . + . gene_id "ENSG00000248771"; gene_version "5"; gene_name "SMIM31"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 164787290 164787396 . + . gene_id "ENSG00000201050"; gene_version "1"; gene_name "RNU6-668P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 164877004 164898965 . + . gene_id "ENSG00000248329"; gene_version "5"; gene_name "APELA"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 164915565 164916983 . + . gene_id "ENSG00000250227"; gene_version "1"; gene_name "TRIM60P14"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164920618 164921063 . - . gene_id "ENSG00000244146"; gene_version "1"; gene_name "AC106872.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164920894 164931047 . + . gene_id "ENSG00000285563"; gene_version "1"; gene_name "AC106872.13"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 164929494 164929951 . - . gene_id "ENSG00000221891"; gene_version "2"; gene_name "FAM218BP"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164933086 164933506 . - . gene_id "ENSG00000270960"; gene_version "1"; gene_name "AC106872.11"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164938322 164939990 . - . gene_id "ENSG00000248645"; gene_version "1"; gene_name "AC106872.6"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 164943290 164943937 . + . gene_id "ENSG00000121089"; gene_version "4"; gene_name "NACA3P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164948079 164949438 . + . gene_id "ENSG00000236941"; gene_version "6"; gene_name "AC106872.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164954446 164977668 . - . gene_id "ENSG00000183439"; gene_version "7"; gene_name "TRIM61"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 164956948 164959122 . + . gene_id "ENSG00000250486"; gene_version "4"; gene_name "FAM218A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 164968587 164970002 . - . gene_id "ENSG00000248632"; gene_version "1"; gene_name "AC106872.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 164987265 164987787 . + . gene_id "ENSG00000248229"; gene_version "1"; gene_name "AC106872.4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165007086 165007959 . - . gene_id "ENSG00000250887"; gene_version "1"; gene_name "AC106872.10"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 165010459 165011851 . + . gene_id "ENSG00000250712"; gene_version "1"; gene_name "AC106872.9"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165012366 165012845 . - . gene_id "ENSG00000240674"; gene_version "1"; gene_name "AC106872.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 165016458 165041744 . + . gene_id "ENSG00000176979"; gene_version "13"; gene_name "TRIM60"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 165016887 165017433 . + . gene_id "ENSG00000276623"; gene_version "1"; gene_name "AC106872.12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165026261 165026944 . - . gene_id "ENSG00000250430"; gene_version "1"; gene_name "AC106872.8"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165045969 165046280 . + . gene_id "ENSG00000249617"; gene_version "1"; gene_name "AC106872.7"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165053864 165060554 . + . gene_id "ENSG00000250374"; gene_version "4"; gene_name "TRIM75P"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 165070608 165208549 . - . gene_id "ENSG00000170088"; gene_version "13"; gene_name "TMEM192"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 165207618 165323156 . + . gene_id "ENSG00000109466"; gene_version "13"; gene_name "KLHL2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 165252580 165252661 . + . gene_id "ENSG00000200974"; gene_version "1"; gene_name "RNU4-87P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 165277812 165279679 . - . gene_id "ENSG00000229894"; gene_version "4"; gene_name "GK3P"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 165327623 165343160 . + . gene_id "ENSG00000052802"; gene_version "12"; gene_name "MSMO1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 165361194 165498320 . + . gene_id "ENSG00000109472"; gene_version "13"; gene_name "CPE"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 165386242 165386337 . + . gene_id "ENSG00000207559"; gene_version "1"; gene_name "MIR578"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 165404067 165406350 . - . gene_id "ENSG00000251596"; gene_version "1"; gene_name "HADHAP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165517255 165517501 . - . gene_id "ENSG00000248287"; gene_version "1"; gene_name "SCGB1D5P"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165547532 165551060 . - . gene_id "ENSG00000248327"; gene_version "1"; gene_name "NOL8P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165664350 165665671 . + . gene_id "ENSG00000250725"; gene_version "2"; gene_name "AC080079.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 165684639 165762778 . + . gene_id "ENSG00000249500"; gene_version "1"; gene_name "LINC01179"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 165873258 166103895 . + . gene_id "ENSG00000038295"; gene_version "7"; gene_name "TLL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 166053187 166053287 . - . gene_id "ENSG00000252959"; gene_version "1"; gene_name "RNA5SP170"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl gene 166312935 166313034 . - . gene_id "ENSG00000206711"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 166388701 166526119 . - . gene_id "ENSG00000249675"; gene_version "1"; gene_name "AC097487.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 166733384 167234796 . - . gene_id "ENSG00000196104"; gene_version "10"; gene_name "SPOCK3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 166918364 166918478 . - . gene_id "ENSG00000212373"; gene_version "1"; gene_name "RNA5SP171"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 167306910 167308789 . - . gene_id "ENSG00000250150"; gene_version "1"; gene_name "AC079349.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 167400495 167400762 . - . gene_id "ENSG00000240772"; gene_version "3"; gene_name "RN7SL776P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 167648430 167648796 . + . gene_id "ENSG00000248913"; gene_version "1"; gene_name "PHBP14"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 167662986 167663302 . + . gene_id "ENSG00000222721"; gene_version "1"; gene_name "RN7SKP188"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 167741879 167742287 . - . gene_id "ENSG00000270336"; gene_version "1"; gene_name "AC105148.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 167946674 168113331 . - . gene_id "ENSG00000248601"; gene_version "1"; gene_name "AC116634.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 168092515 168187690 . + . gene_id "ENSG00000109511"; gene_version "11"; gene_name "ANXA10"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 168216293 168318807 . - . gene_id "ENSG00000137628"; gene_version "16"; gene_name "DDX60"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 168356735 168537786 . - . gene_id "ENSG00000181381"; gene_version "13"; gene_name "DDX60L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 168471409 168471539 . + . gene_id "ENSG00000207171"; gene_version "1"; gene_name "RF00432"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 168497066 168928457 . + . gene_id "ENSG00000129116"; gene_version "18"; gene_name "PALLD"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 168598240 168598757 . - . gene_id "ENSG00000229226"; gene_version "3"; gene_name "BTF3L4P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 168647896 168648587 . - . gene_id "ENSG00000249623"; gene_version "1"; gene_name "AC079858.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 168686608 168686716 . - . gene_id "ENSG00000206613"; gene_version "1"; gene_name "RNU6-1336P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 168755816 168756382 . + . gene_id "ENSG00000214676"; gene_version "4"; gene_name "RPL9P16"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 168828919 168832937 . - . gene_id "ENSG00000249609"; gene_version "1"; gene_name "AC080188.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 168843988 168844735 . + . gene_id "ENSG00000279384"; gene_version "1"; gene_name "AC080188.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 168863770 169010275 . - . gene_id "ENSG00000145439"; gene_version "11"; gene_name "CBR4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 168885355 168885461 . + . gene_id "ENSG00000201176"; gene_version "1"; gene_name "RNU6-853P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 169005249 169005344 . + . gene_id "ENSG00000201818"; gene_version "1"; gene_name "RNY4P17"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 169010430 169010939 . + . gene_id "ENSG00000251445"; gene_version "1"; gene_name "AC021151.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 169094256 169271105 . - . gene_id "ENSG00000154447"; gene_version "14"; gene_name "SH3RF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 169166272 169167117 . + . gene_id "ENSG00000214671"; gene_version "4"; gene_name "RPL6P12"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 169201794 169220349 . + . gene_id "ENSG00000251171"; gene_version "1"; gene_name "AC096741.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 169392857 169612629 . - . gene_id "ENSG00000137601"; gene_version "16"; gene_name "NEK1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 169612633 169723673 . + . gene_id "ENSG00000109572"; gene_version "13"; gene_name "CLCN3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 169729465 169757953 . - . gene_id "ENSG00000056050"; gene_version "6"; gene_name "HPF1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 169791221 169791702 . - . gene_id "ENSG00000229204"; gene_version "3"; gene_name "PTGES3P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 169832653 169833363 . + . gene_id "ENSG00000248625"; gene_version "1"; gene_name "AC079768.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 169917761 169975902 . - . gene_id "ENSG00000248319"; gene_version "1"; gene_name "LINC02275"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 169945981 169963334 . + . gene_id "ENSG00000251200"; gene_version "1"; gene_name "AC084866.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 169981747 169993806 . + . gene_id "ENSG00000249955"; gene_version "1"; gene_name "AC084866.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 169986597 170033031 . - . gene_id "ENSG00000198948"; gene_version "11"; gene_name "MFAP3L"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 170060222 170091699 . - . gene_id "ENSG00000109576"; gene_version "13"; gene_name "AADAT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 170099818 170100104 . + . gene_id "ENSG00000248822"; gene_version "1"; gene_name "APOBEC3AP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 170141292 170142532 . - . gene_id "ENSG00000248739"; gene_version "1"; gene_name "AC069306.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 170273919 170283079 . + . gene_id "ENSG00000250266"; gene_version "1"; gene_name "LINC01612"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 170343089 170372311 . + . gene_id "ENSG00000251061"; gene_version "2"; gene_name "LINC02512"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 170481695 170482195 . - . gene_id "ENSG00000250082"; gene_version "1"; gene_name "AC074255.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 170581470 170605450 . - . gene_id "ENSG00000181359"; gene_version "5"; gene_name "HSP90AA6P"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 170742469 170743718 . - . gene_id "ENSG00000250968"; gene_version "1"; gene_name "LINC02382"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 170814339 170814548 . - . gene_id "ENSG00000249943"; gene_version "1"; gene_name "AC097486.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 170891467 170891597 . + . gene_id "ENSG00000251961"; gene_version "1"; gene_name "RNU6ATAC13P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 171040602 171059163 . + . gene_id "ENSG00000248872"; gene_version "1"; gene_name "LINC02431"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 171113789 171114581 . + . gene_id "ENSG00000249525"; gene_version "1"; gene_name "AC034159.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 171169209 171169942 . - . gene_id "ENSG00000248755"; gene_version "1"; gene_name "AC092639.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 171186184 171186292 . + . gene_id "ENSG00000278502"; gene_version "1"; gene_name "MIR6082"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 171289475 171298267 . - . gene_id "ENSG00000248339"; gene_version "1"; gene_name "LINC02504"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 171553000 171564267 . - . gene_id "ENSG00000251176"; gene_version "1"; gene_name "AC074254.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 171602683 171638763 . - . gene_id "ENSG00000249297"; gene_version "1"; gene_name "LINC02174"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 171812254 173041559 . + . gene_id "ENSG00000174473"; gene_version "15"; gene_name "GALNTL6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 172380028 172380487 . - . gene_id "ENSG00000248637"; gene_version "1"; gene_name "AC108064.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 173131928 173169652 . - . gene_id "ENSG00000245213"; gene_version "6"; gene_name "AC105285.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 173141643 173141938 . + . gene_id "ENSG00000241652"; gene_version "3"; gene_name "RN7SL253P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 173168753 173323967 . + . gene_id "ENSG00000109586"; gene_version "11"; gene_name "GALNT7"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 mirbase gene 173268160 173268233 . + . gene_id "ENSG00000221296"; gene_version "2"; gene_name "MIR548T"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 173322206 173329694 . - . gene_id "ENSG00000248774"; gene_version "1"; gene_name "AC097534.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 173331695 173335125 . - . gene_id "ENSG00000164104"; gene_version "11"; gene_name "HMGB2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 173363780 173370446 . - . gene_id "ENSG00000272870"; gene_version "1"; gene_name "AC097534.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 173369969 173377532 . + . gene_id "ENSG00000164105"; gene_version "3"; gene_name "SAP30"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 173384701 173406380 . - . gene_id "ENSG00000164106"; gene_version "7"; gene_name "SCRG1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 173419245 173420137 . - . gene_id "ENSG00000242882"; gene_version "1"; gene_name "RPL5P11"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 173446603 173446704 . - . gene_id "ENSG00000252898"; gene_version "1"; gene_name "RNU6-1096P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 173467833 173470041 . - . gene_id "ENSG00000261646"; gene_version "1"; gene_name "AC093849.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 173524969 173530229 . - . gene_id "ENSG00000164107"; gene_version "8"; gene_name "HAND2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 173527270 173659696 . + . gene_id "ENSG00000237125"; gene_version "9"; gene_name "HAND2-AS1"; gene_source "ensembl_havana"; gene_biotype "antisense"; -chr4 havana gene 173615936 173616906 . - . gene_id "ENSG00000234801"; gene_version "3"; gene_name "MORF4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 173633728 173634371 . - . gene_id "ENSG00000213370"; gene_version "3"; gene_name "RANP6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 173877471 173913252 . - . gene_id "ENSG00000250043"; gene_version "1"; gene_name "AC106895.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 173897252 173929525 . + . gene_id "ENSG00000250708"; gene_version "1"; gene_name "LINC02269"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 173924207 173990861 . - . gene_id "ENSG00000251216"; gene_version "1"; gene_name "AC106895.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 174094660 174220398 . - . gene_id "ENSG00000248174"; gene_version "5"; gene_name "LINC02268"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 174135055 174154637 . - . gene_id "ENSG00000250957"; gene_version "1"; gene_name "AC012055.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 174164441 174168913 . - . gene_id "ENSG00000251213"; gene_version "1"; gene_name "AC012055.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 174236658 174284264 . - . gene_id "ENSG00000164117"; gene_version "13"; gene_name "FBXO8"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 174283677 174333380 . + . gene_id "ENSG00000164118"; gene_version "12"; gene_name "CEP44"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 174354854 174376445 . - . gene_id "ENSG00000249875"; gene_version "1"; gene_name "AC116616.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 mirbase gene 174423795 174423864 . + . gene_id "ENSG00000265846"; gene_version "1"; gene_name "MIR4276"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl_havana gene 174490177 174523154 . - . gene_id "ENSG00000164120"; gene_version "13"; gene_name "HPGD"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 174523701 174540344 . - . gene_id "ENSG00000250596"; gene_version "2"; gene_name "AC096751.1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 174536640 174540784 . + . gene_id "ENSG00000251584"; gene_version "1"; gene_name "AC096751.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 174636914 174829314 . - . gene_id "ENSG00000145451"; gene_version "12"; gene_name "GLRA3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 174829668 174978180 . + . gene_id "ENSG00000168594"; gene_version "15"; gene_name "ADAM29"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 174923813 174924038 . - . gene_id "ENSG00000250200"; gene_version "1"; gene_name "AC105914.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 174977571 174979381 . - . gene_id "ENSG00000250431"; gene_version "1"; gene_name "AC105914.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 175017016 175019214 . + . gene_id "ENSG00000249411"; gene_version "1"; gene_name "AC022325.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 175286605 175290767 . + . gene_id "ENSG00000249284"; gene_version "1"; gene_name "AC095050.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 175346358 175403110 . - . gene_id "ENSG00000248551"; gene_version "1"; gene_name "AC095050.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 175458289 175466697 . - . gene_id "ENSG00000249945"; gene_version "1"; gene_name "AC131094.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 175494614 175496000 . + . gene_id "ENSG00000251174"; gene_version "1"; gene_name "TSEN2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 175574868 175576140 . + . gene_id "ENSG00000248574"; gene_version "1"; gene_name "ADAM20P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 175632934 176002664 . - . gene_id "ENSG00000150625"; gene_version "16"; gene_name "GPM6A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 175790307 175812189 . + . gene_id "ENSG00000249106"; gene_version "1"; gene_name "AC097537.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 175962061 175962485 . + . gene_id "ENSG00000248249"; gene_version "1"; gene_name "AC110794.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 176012038 176014417 . - . gene_id "ENSG00000250372"; gene_version "1"; gene_name "MARK2P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 176065834 176182818 . + . gene_id "ENSG00000150627"; gene_version "15"; gene_name "WDR17"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 176098163 176098285 . + . gene_id "ENSG00000201516"; gene_version "1"; gene_name "RF00432"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 ensembl_havana gene 176184638 176195671 . - . gene_id "ENSG00000150628"; gene_version "6"; gene_name "SPATA4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 176213673 176277571 . - . gene_id "ENSG00000164122"; gene_version "8"; gene_name "ASB5"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 176308268 176320458 . - . gene_id "ENSG00000248980"; gene_version "1"; gene_name "AC019163.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 176319964 176332245 . + . gene_id "ENSG00000129128"; gene_version "12"; gene_name "SPCS3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 176631392 176633231 . - . gene_id "ENSG00000248480"; gene_version "1"; gene_name "AC093801.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 176669621 176706145 . + . gene_id "ENSG00000248388"; gene_version "5"; gene_name "AC093801.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 176683538 176792727 . - . gene_id "ENSG00000150630"; gene_version "3"; gene_name "VEGFC"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 176866614 176875457 . - . gene_id "ENSG00000249458"; gene_version "1"; gene_name "AC092673.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 176875702 176880605 . + . gene_id "ENSG00000250263"; gene_version "1"; gene_name "LINC02509"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 177181442 177181741 . + . gene_id "ENSG00000222859"; gene_version "1"; gene_name "RN7SKP136"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 177242539 177248773 . - . gene_id "ENSG00000249008"; gene_version "1"; gene_name "AC097518.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 177309836 177362943 . + . gene_id "ENSG00000109674"; gene_version "3"; gene_name "NEIL3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 177343004 177357032 . - . gene_id "ENSG00000249084"; gene_version "1"; gene_name "AC027627.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 177430770 177442503 . - . gene_id "ENSG00000038002"; gene_version "8"; gene_name "AGA"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 177444979 177677126 . + . gene_id "ENSG00000250131"; gene_version "1"; gene_name "AC078881.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 177457111 177457228 . - . gene_id "ENSG00000201931"; gene_version "1"; gene_name "RNA5SP172"; gene_source "ensembl"; gene_biotype "rRNA"; -chr4 ensembl gene 177457111 177457228 . - . gene_id "ENSG00000285574"; gene_version "1"; gene_name "AC078881.2"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 177686673 177691068 . - . gene_id "ENSG00000251416"; gene_version "1"; gene_name "AC103879.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 177728757 177990750 . + . gene_id "ENSG00000231171"; gene_version "3"; gene_name "LINC01098"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 177729638 177907936 . - . gene_id "ENSG00000251504"; gene_version "1"; gene_name "LINC01099"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 178116721 178116861 . - . gene_id "ENSG00000253000"; gene_version "1"; gene_name "RNU1-45P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 178286695 178287285 . + . gene_id "ENSG00000241877"; gene_version "1"; gene_name "AC095041.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 178406695 178406830 . + . gene_id "ENSG00000201727"; gene_version "1"; gene_name "RNA5SP173"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl gene 178685886 178685956 . - . gene_id "ENSG00000212191"; gene_version "1"; gene_name "RF00571"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 179069437 179069594 . + . gene_id "ENSG00000250839"; gene_version "1"; gene_name "AC018710.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 179389134 179465305 . - . gene_id "ENSG00000250993"; gene_version "1"; gene_name "AC020551.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 179856853 179857581 . + . gene_id "ENSG00000248921"; gene_version "1"; gene_name "AC021193.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 180573464 180574027 . - . gene_id "ENSG00000251025"; gene_version "1"; gene_name "NDUFB5P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 180731164 180759038 . - . gene_id "ENSG00000249883"; gene_version "1"; gene_name "AC104803.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 181064089 181159149 . - . gene_id "ENSG00000248197"; gene_version "1"; gene_name "LINC00290"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 181237358 181237564 . - . gene_id "ENSG00000248770"; gene_version "1"; gene_name "AC019235.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 181261161 181265029 . - . gene_id "ENSG00000249460"; gene_version "1"; gene_name "LINC02500"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 181522666 181523001 . + . gene_id "ENSG00000225356"; gene_version "3"; gene_name "AC093840.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 181820019 181829973 . - . gene_id "ENSG00000251336"; gene_version "1"; gene_name "TEMN3-AS1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 181834865 181835108 . - . gene_id "ENSG00000251742"; gene_version "1"; gene_name "RN7SKP13"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 181874438 182145249 . - . gene_id "ENSG00000177822"; gene_version "7"; gene_name "AC098864.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 181905790 181906467 . - . gene_id "ENSG00000251433"; gene_version "1"; gene_name "CCNHP1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 182143987 182803024 . + . gene_id "ENSG00000218336"; gene_version "8"; gene_name "TENM3"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 havana gene 182144852 182190382 . + . gene_id "ENSG00000248266"; gene_version "1"; gene_name "AC108142.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 mirbase gene 182169293 182169378 . + . gene_id "ENSG00000221227"; gene_version "1"; gene_name "MIR1305"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 ensembl gene 182548659 182548779 . + . gene_id "ENSG00000252343"; gene_version "1"; gene_name "RNU2-34P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 182631454 182631688 . - . gene_id "ENSG00000251714"; gene_version "1"; gene_name "RN7SKP67"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 182697902 182708042 . - . gene_id "ENSG00000248816"; gene_version "1"; gene_name "AC079226.2"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 182772565 182773931 . - . gene_id "ENSG00000248694"; gene_version "1"; gene_name "AC079226.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 182881777 182882203 . - . gene_id "ENSG00000272646"; gene_version "1"; gene_name "AC079766.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 182890060 182917936 . - . gene_id "ENSG00000129187"; gene_version "14"; gene_name "DCTD"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 183028601 183029720 . - . gene_id "ENSG00000250636"; gene_version "1"; gene_name "AC019193.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 183037665 183040119 . + . gene_id "ENSG00000230219"; gene_version "3"; gene_name "FAM92A1P2"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 183075480 183076033 . - . gene_id "ENSG00000273180"; gene_version "1"; gene_name "AC019193.3"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 183094423 183095056 . - . gene_id "ENSG00000272784"; gene_version "1"; gene_name "AC019193.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 183097017 183099199 . - . gene_id "ENSG00000251359"; gene_version "4"; gene_name "WWC2-AS2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 183099293 183320777 . + . gene_id "ENSG00000151718"; gene_version "15"; gene_name "WWC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 183233628 183240634 . - . gene_id "ENSG00000251128"; gene_version "1"; gene_name "WWC2-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 183318194 183320774 . - . gene_id "ENSG00000177300"; gene_version "6"; gene_name "CLDN22"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 183321764 183322426 . - . gene_id "ENSG00000185758"; gene_version "9"; gene_name "CLDN24"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 183380345 183381705 . + . gene_id "ENSG00000250292"; gene_version "1"; gene_name "AC093844.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 183418890 183419805 . - . gene_id "ENSG00000248376"; gene_version "2"; gene_name "AC112698.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 183444591 183448198 . + . gene_id "ENSG00000168564"; gene_version "5"; gene_name "CDKN2AIP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 183483490 183484185 . + . gene_id "ENSG00000213434"; gene_version "2"; gene_name "VTI1BP2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 183494938 183504494 . - . gene_id "ENSG00000232648"; gene_version "3"; gene_name "AC107214.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 183504994 183511096 . + . gene_id "ENSG00000168556"; gene_version "6"; gene_name "ING2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 183516894 183517527 . + . gene_id "ENSG00000272744"; gene_version "1"; gene_name "AC107214.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 183639635 183659225 . - . gene_id "ENSG00000182552"; gene_version "14"; gene_name "RWDD4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 183653572 183653676 . - . gene_id "ENSG00000252157"; gene_version "1"; gene_name "RNU6-479P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 183659267 183713594 . + . gene_id "ENSG00000168538"; gene_version "15"; gene_name "TRAPPC11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 183675603 183675715 . - . gene_id "ENSG00000201433"; gene_version "1"; gene_name "RNU6-335P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl gene 183705931 183706031 . + . gene_id "ENSG00000251739"; gene_version "1"; gene_name "RNU6-1053P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 183762115 183765721 . - . gene_id "ENSG00000283383"; gene_version "1"; gene_name "AC108477.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 183797692 184023526 . + . gene_id "ENSG00000173320"; gene_version "11"; gene_name "STOX2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 183987678 183988750 . + . gene_id "ENSG00000248206"; gene_version "1"; gene_name "AC074194.1"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 184014035 184016382 . + . gene_id "ENSG00000283355"; gene_version "1"; gene_name "AC074194.2"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 184072403 184073039 . + . gene_id "ENSG00000250726"; gene_version "1"; gene_name "AC107222.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 184088706 184221230 . - . gene_id "ENSG00000164303"; gene_version "10"; gene_name "ENPP6"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 184254509 184255330 . + . gene_id "ENSG00000240159"; gene_version "1"; gene_name "AC079080.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 184278936 184279233 . + . gene_id "ENSG00000244512"; gene_version "3"; gene_name "RN7SL28P"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 184299129 184299640 . - . gene_id "ENSG00000227765"; gene_version "4"; gene_name "MYL12BP2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 184340756 184353977 . - . gene_id "ENSG00000180712"; gene_version "3"; gene_name "LINC02363"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 184365183 184382306 . - . gene_id "ENSG00000249096"; gene_version "6"; gene_name "LINC02362"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 184387713 184474580 . - . gene_id "ENSG00000168310"; gene_version "10"; gene_name "IRF2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 184431966 184432049 . + . gene_id "ENSG00000251878"; gene_version "1"; gene_name "RF00152"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 184471924 184472609 . - . gene_id "ENSG00000270426"; gene_version "1"; gene_name "AC099343.2"; gene_source "havana"; gene_biotype "sense_intronic"; -chr4 havana gene 184474802 184477304 . + . gene_id "ENSG00000271646"; gene_version "1"; gene_name "AC099343.3"; gene_source "havana"; gene_biotype "bidirectional_promoter_lncRNA"; -chr4 havana gene 184506460 184537554 . - . gene_id "ENSG00000271538"; gene_version "5"; gene_name "LINC02427"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 184559175 184559783 . - . gene_id "ENSG00000249056"; gene_version "1"; gene_name "AC099343.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 184584093 184625030 . - . gene_id "ENSG00000254233"; gene_version "1"; gene_name "LINC02365"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 184627696 184649509 . - . gene_id "ENSG00000164305"; gene_version "18"; gene_name "CASP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 184649613 184694963 . + . gene_id "ENSG00000164306"; gene_version "10"; gene_name "PRIMPOL"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 184694618 184734133 . - . gene_id "ENSG00000151725"; gene_version "11"; gene_name "CENPU"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 184755595 184826818 . - . gene_id "ENSG00000151726"; gene_version "13"; gene_name "ACSL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 184798296 184799046 . - . gene_id "ENSG00000249138"; gene_version "1"; gene_name "SLED1"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 184813619 184821300 . + . gene_id "ENSG00000251139"; gene_version "2"; gene_name "AC084871.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 184844585 184855751 . - . gene_id "ENSG00000251230"; gene_version "5"; gene_name "MIR3945HG"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 mirbase gene 184851013 184851110 . - . gene_id "ENSG00000266698"; gene_version "1"; gene_name "MIR3945"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 184893871 184899454 . - . gene_id "ENSG00000249173"; gene_version "5"; gene_name "LINC01093"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 184910889 184911352 . - . gene_id "ENSG00000251147"; gene_version "1"; gene_name "AC084871.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 mirbase gene 184938383 184938440 . - . gene_id "ENSG00000263458"; gene_version "1"; gene_name "MIR4455"; gene_source "mirbase"; gene_biotype "miRNA"; -chr4 havana gene 184984277 184988127 . - . gene_id "ENSG00000279460"; gene_version "1"; gene_name "AC112243.1"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 184988997 185005186 . + . gene_id "ENSG00000248517"; gene_version "1"; gene_name "LINC02437"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 185018841 185020804 . + . gene_id "ENSG00000187821"; gene_version "8"; gene_name "HELT"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 185051896 185107248 . + . gene_id "ENSG00000250754"; gene_version "5"; gene_name "LINC02436"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 185064981 185065323 . + . gene_id "ENSG00000249520"; gene_version "1"; gene_name "AC093824.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 185143241 185150382 . + . gene_id "ENSG00000151729"; gene_version "10"; gene_name "SLC25A4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 185159665 185209504 . - . gene_id "ENSG00000164323"; gene_version "13"; gene_name "CFAP97"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 185204237 185370185 . + . gene_id "ENSG00000109762"; gene_version "15"; gene_name "SNX25"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 185363879 185395899 . - . gene_id "ENSG00000109771"; gene_version "15"; gene_name "LRP2BP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 185370725 185390928 . + . gene_id "ENSG00000250410"; gene_version "1"; gene_name "AC112722.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 185396021 185400628 . + . gene_id "ENSG00000186352"; gene_version "8"; gene_name "ANKRD37"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 185399540 185425985 . - . gene_id "ENSG00000109775"; gene_version "10"; gene_name "UFSP2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 185415973 185416086 . - . gene_id "ENSG00000207231"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 ensembl_havana gene 185426249 185449826 . + . gene_id "ENSG00000205129"; gene_version "8"; gene_name "C4orf47"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 185445182 185471759 . - . gene_id "ENSG00000168491"; gene_version "9"; gene_name "CCDC110"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 185471516 185472263 . + . gene_id "ENSG00000249679"; gene_version "1"; gene_name "AC106897.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl_havana gene 185500660 185535612 . - . gene_id "ENSG00000154553"; gene_version "14"; gene_name "PDLIM3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 185585444 185956652 . - . gene_id "ENSG00000154556"; gene_version "18"; gene_name "SORBS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 185587909 185594003 . + . gene_id "ENSG00000233110"; gene_version "1"; gene_name "AC093797.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 185665885 185675417 . + . gene_id "ENSG00000235902"; gene_version "1"; gene_name "AC108472.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 ensembl gene 185709873 185709967 . - . gene_id "ENSG00000207497"; gene_version "1"; gene_name "RF00019"; gene_source "ensembl"; gene_biotype "misc_RNA"; -chr4 havana gene 185756929 185757048 . - . gene_id "ENSG00000285745"; gene_version "1"; gene_name "AC104805.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 185918140 185919460 . + . gene_id "ENSG00000235149"; gene_version "1"; gene_name "AC096659.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 186026456 186026586 . - . gene_id "ENSG00000222727"; gene_version "1"; gene_name "RNU4-64P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 186069152 186088069 . + . gene_id "ENSG00000164342"; gene_version "12"; gene_name "TLR3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 186104419 186172667 . + . gene_id "ENSG00000109794"; gene_version "13"; gene_name "FAM149A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 186130021 186130155 . + . gene_id "ENSG00000253013"; gene_version "1"; gene_name "RF00322"; gene_source "ensembl"; gene_biotype "snoRNA"; -chr4 havana gene 186157896 186158843 . + . gene_id "ENSG00000250327"; gene_version "1"; gene_name "RPSAP70"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 186170863 186171257 . - . gene_id "ENSG00000251008"; gene_version "1"; gene_name "ORAOV1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 186189032 186191490 . - . gene_id "ENSG00000279943"; gene_version "1"; gene_name "FLJ38576"; gene_source "havana"; gene_biotype "TEC"; -chr4 ensembl_havana gene 186191520 186213456 . + . gene_id "ENSG00000145476"; gene_version "15"; gene_name "CYP4V2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 186208979 186258471 . + . gene_id "ENSG00000164344"; gene_version "15"; gene_name "KLKB1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 186265945 186288806 . + . gene_id "ENSG00000088926"; gene_version "13"; gene_name "F11"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 186286094 186500997 . - . gene_id "ENSG00000251165"; gene_version "5"; gene_name "F11-AS1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 186328716 186329601 . - . gene_id "ENSG00000213332"; gene_version "4"; gene_name "SLC25A5P6"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 186426546 186555328 . - . gene_id "ENSG00000272297"; gene_version "2"; gene_name "AC018709.1"; gene_source "havana"; gene_biotype "protein_coding"; -chr4 ensembl gene 186501109 186501215 . + . gene_id "ENSG00000212387"; gene_version "1"; gene_name "RNU6-1055P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 186533655 186555567 . - . gene_id "ENSG00000168412"; gene_version "6"; gene_name "MTNR1A"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 186587783 186726722 . - . gene_id "ENSG00000083857"; gene_version "13"; gene_name "FAT1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 186890969 186892366 . + . gene_id "ENSG00000250829"; gene_version "2"; gene_name "AC108865.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 186892552 186892983 . + . gene_id "ENSG00000272218"; gene_version "1"; gene_name "AC108865.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 186900540 186900838 . + . gene_id "ENSG00000249539"; gene_version "1"; gene_name "MRPS36P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 186979490 187021973 . - . gene_id "ENSG00000249742"; gene_version "1"; gene_name "AC110772.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187060099 187060930 . + . gene_id "ENSG00000250971"; gene_version "1"; gene_name "AC108474.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187201986 187209346 . + . gene_id "ENSG00000249747"; gene_version "1"; gene_name "LINC02374"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187304083 187309682 . - . gene_id "ENSG00000250658"; gene_version "1"; gene_name "AC097652.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187370648 187371921 . + . gene_id "ENSG00000250042"; gene_version "1"; gene_name "LINC02514"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187413564 187415697 . + . gene_id "ENSG00000250620"; gene_version "1"; gene_name "LINC02515"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187441677 187444298 . - . gene_id "ENSG00000251643"; gene_version "1"; gene_name "AC093763.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 187516153 187517208 . - . gene_id "ENSG00000251490"; gene_version "1"; gene_name "AC093763.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187532878 187672641 . - . gene_id "ENSG00000250590"; gene_version "5"; gene_name "LINC02492"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187613765 187660369 . + . gene_id "ENSG00000249642"; gene_version "1"; gene_name "AC097521.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 187746094 187748199 . - . gene_id "ENSG00000249162"; gene_version "1"; gene_name "ADAM20P3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 187970273 187971284 . + . gene_id "ENSG00000213331"; gene_version "4"; gene_name "AC108073.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 187995771 188005050 . + . gene_id "ENSG00000179059"; gene_version "9"; gene_name "ZFP42"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 ensembl_havana gene 188091273 188109603 . - . gene_id "ENSG00000179046"; gene_version "8"; gene_name "TRIML2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 188106558 188106914 . + . gene_id "ENSG00000241011"; gene_version "1"; gene_name "AC108073.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 188121531 188121634 . - . gene_id "ENSG00000201085"; gene_version "1"; gene_name "RNU6-173P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 ensembl_havana gene 188139419 188147743 . + . gene_id "ENSG00000184108"; gene_version "7"; gene_name "TRIML1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 188140822 188143379 . - . gene_id "ENSG00000247130"; gene_version "2"; gene_name "AC138781.1"; gene_source "havana"; gene_biotype "antisense"; -chr4 havana gene 188160065 188161139 . + . gene_id "ENSG00000248370"; gene_version "1"; gene_name "LINC02434"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 188349376 188350024 . - . gene_id "ENSG00000242169"; gene_version "2"; gene_name "AC093789.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 188387471 188389666 . - . gene_id "ENSG00000248880"; gene_version "1"; gene_name "ICE2P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 188400736 188681051 . + . gene_id "ENSG00000249378"; gene_version "5"; gene_name "LINC01060"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 188630924 188631747 . + . gene_id "ENSG00000250523"; gene_version "1"; gene_name "AC093909.3"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 188713644 188715442 . + . gene_id "ENSG00000275826"; gene_version "1"; gene_name "AC093909.5"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl gene 188716665 188716725 . - . gene_id "ENSG00000252275"; gene_version "1"; gene_name "RNU7-192P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 188738373 188739494 . + . gene_id "ENSG00000180015"; gene_version "12"; gene_name "AC093909.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 188740507 188741281 . - . gene_id "ENSG00000278974"; gene_version "1"; gene_name "AC093909.6"; gene_source "havana"; gene_biotype "TEC"; -chr4 havana gene 188757679 188778979 . + . gene_id "ENSG00000249269"; gene_version "1"; gene_name "AC093909.2"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 188776657 188785511 . + . gene_id "ENSG00000251619"; gene_version "1"; gene_name "LINC02508"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 188777679 188796633 . - . gene_id "ENSG00000250626"; gene_version "2"; gene_name "AC093909.4"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 188990715 189002075 . - . gene_id "ENSG00000250024"; gene_version "1"; gene_name "AC122138.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 189193100 189204877 . + . gene_id "ENSG00000251310"; gene_version "1"; gene_name "AC107391.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 189288677 189291336 . - . gene_id "ENSG00000249877"; gene_version "1"; gene_name "AC105924.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 189472965 189475192 . + . gene_id "ENSG00000205100"; gene_version "2"; gene_name "HSP90AA4P"; gene_source "havana"; gene_biotype "transcribed_processed_pseudogene"; -chr4 havana gene 189659605 189661486 . + . gene_id "ENSG00000250739"; gene_version "1"; gene_name "LINC01262"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 189703881 189704490 . - . gene_id "ENSG00000272566"; gene_version "1"; gene_name "AF250324.1"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl gene 189709539 189709714 . - . gene_id "ENSG00000202215"; gene_version "1"; gene_name "RNU1-51P"; gene_source "ensembl"; gene_biotype "snRNA"; -chr4 havana gene 189780336 189940271 . - . gene_id "ENSG00000245685"; gene_version "6"; gene_name "FRG1-DT"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 189881515 189884868 . + . gene_id "ENSG00000250666"; gene_version "1"; gene_name "LINC01596"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 ensembl_havana gene 189940788 189963204 . + . gene_id "ENSG00000109536"; gene_version "11"; gene_name "FRG1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 189973599 189973847 . - . gene_id "ENSG00000249462"; gene_version "1"; gene_name "MLLT10P2"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 189979902 189982379 . + . gene_id "ENSG00000271307"; gene_version "3"; gene_name "AF146191.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 ensembl_havana gene 189982523 189984871 . - . gene_id "ENSG00000251297"; gene_version "1"; gene_name "TUBB7P"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl gene 190015138 190015255 . + . gene_id "ENSG00000199572"; gene_version "1"; gene_name "RNA5SP174"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 ensembl gene 190017696 190017814 . + . gene_id "ENSG00000201145"; gene_version "1"; gene_name "RNA5SP175"; gene_source "ensembl"; gene_biotype "rRNA_pseudogene"; -chr4 havana gene 190021407 190022665 . - . gene_id "ENSG00000224807"; gene_version "5"; gene_name "DUX4L9"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190024351 190027257 . - . gene_id "ENSG00000205097"; gene_version "6"; gene_name "FRG2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 190037916 190038399 . - . gene_id "ENSG00000250053"; gene_version "1"; gene_name "RARRES2P4"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 190041342 190043414 . + . gene_id "ENSG00000214273"; gene_version "4"; gene_name "AGGF1P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 190057902 190063005 . - . gene_id "ENSG00000249003"; gene_version "1"; gene_name "CLUHP4"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 havana gene 190064502 190067864 . + . gene_id "ENSG00000281591"; gene_version "1"; gene_name "DBET"; gene_source "havana"; gene_biotype "lincRNA"; -chr4 havana gene 190065233 190065914 . + . gene_id "ENSG00000277162"; gene_version "1"; gene_name "U85056.1"; gene_source "havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190067935 190069209 . + . gene_id "ENSG00000281720"; gene_version "1"; gene_name "DUX4L8"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190071232 190072506 . + . gene_id "ENSG00000281652"; gene_version "1"; gene_name "DUX4L7"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190074525 190075799 . + . gene_id "ENSG00000281058"; gene_version "1"; gene_name "DUX4L6"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190077818 190079092 . + . gene_id "ENSG00000280799"; gene_version "1"; gene_name "DUX4L5"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190081118 190082386 . + . gene_id "ENSG00000258834"; gene_version "4"; gene_name "DUX4L4"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190084412 190085686 . + . gene_id "ENSG00000280757"; gene_version "1"; gene_name "DUX4L1"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190087705 190088979 . + . gene_id "ENSG00000281627"; gene_version "1"; gene_name "DUX4L3"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190091005 190092279 . + . gene_id "ENSG00000280457"; gene_version "1"; gene_name "DUX4L2"; gene_source "ensembl_havana"; gene_biotype "unprocessed_pseudogene"; -chr4 ensembl_havana gene 190173774 190185942 . + . gene_id "ENSG00000260596"; gene_version "5"; gene_name "DUX4"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; -chr4 havana gene 190195727 190196190 . + . gene_id "ENSG00000261914"; gene_version "2"; gene_name "RPL23AP84"; gene_source "havana"; gene_biotype "processed_pseudogene"; -chr4 havana gene 190195738 190195978 . - . gene_id "ENSG00000282994"; gene_version "1"; gene_name "AC215524.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; diff --git a/tobias/footprinting/BINDetect.py b/tobias/footprinting/BINDetect.py index c263ba7..b002fc8 100644 --- a/tobias/footprinting/BINDetect.py +++ b/tobias/footprinting/BINDetect.py @@ -22,13 +22,16 @@ import sklearn from sklearn import mixture +from sklearn.neighbors import KernelDensity +from sklearn.model_selection import GridSearchCV import matplotlib.pyplot as plt from matplotlib.backends.backend_pdf import PdfPages -import seaborn as sns +from matplotlib.ticker import NullFormatter import pandas as pd import scipy from scipy.optimize import curve_fit +from sklearn import preprocessing #Bio-specific packages import pyBigWig @@ -49,6 +52,7 @@ from scipy.optimize import OptimizeWarning warnings.simplefilter("ignore", OptimizeWarning) + #--------------------------------------------------------------------------------------------------------------# def add_bindetect_arguments(parser): @@ -67,9 +71,9 @@ def add_bindetect_arguments(parser): required = parser.add_argument_group('Required arguments') required.add_argument('--signals', metavar="", help="Signal per condition (.bigwig format)", nargs="*") + required.add_argument('--peaks', metavar="", help="Peaks.bed containing open chromatin regions across all conditions") required.add_argument('--motifs', metavar="", help="Motifs in pfm/jaspar format") required.add_argument('--genome', metavar="", help="Genome .fasta file") - required.add_argument('--peaks', metavar="", help="Peaks.bed containing open chromatin regions") optargs = parser.add_argument_group('Optional arguments') optargs.add_argument('--cond_names', metavar="", nargs="*", help="Names of conditions fitting to --signals (default: prefix of --signals)") @@ -97,9 +101,7 @@ def find_nearest_idx(array, value): #----------------------------------------------------------------------------------------------------------------# def run_bindetect(args): - - #import matplotlib.pyplot as plt - #from matplotlib.backends.backend_pdf import PdfPages + """ Main function to run bindetect algorithm with input files and parameters given in args """ begin_time = datetime.now() @@ -108,6 +110,7 @@ def run_bindetect(args): args.cond_names = [os.path.basename(os.path.splitext(bw)[0]) for bw in args.signals] if args.cond_names is None else args.cond_names args.outdir = os.path.abspath(args.outdir) + #Set output files states = ["bound", "unbound"] outfiles = [os.path.abspath(os.path.join(args.outdir, "*", "beds", "*_{0}_{1}.bed".format(condition, state))) for (condition, state) in itertools.product(args.cond_names, states)] outfiles.append(os.path.abspath(os.path.join(args.outdir, "*", "beds", "*_all.bed"))) @@ -121,9 +124,10 @@ def run_bindetect(args): outfiles.append(os.path.abspath(os.path.join(args.outdir, "bindetect_results.xlsx"))) outfiles.append(os.path.abspath(os.path.join(args.outdir, "bindetect_figures.pdf"))) - #----------------------------------------------------------------------------------------------------# - #------------------------------------------- Setup logger -------------------------------------------# - #----------------------------------------------------------------------------------------------------# + + #-------------------------------------------------------------------------------------------------------------# + #------------------------------------------------- Setup logger ----------------------------------------------# + #-------------------------------------------------------------------------------------------------------------# logger = create_logger(args.verbosity, args.log) @@ -140,8 +144,8 @@ def run_bindetect(args): logger.comment("\n") # Setup pool - worker_cores = max(1, args.cores - 1) #max(1, int(args.cores * 0.9)) - writer_cores = 1 #int(args.cores * 0.1)) + worker_cores = max(1, args.cores - 1) #max(1, int(args.cores * 0.9)) + writer_cores = 1 #int(args.cores * 0.1)) logger.debug("Worker cores: {0}".format(worker_cores)) logger.debug("Writer cores: {0}".format(writer_cores)) @@ -150,6 +154,7 @@ def run_bindetect(args): args.no_overwrite = False #leftover from earlier; remove + #-------------------------------------------------------------------------------------------------------------# #-------------------------- Pre-processing data: Reading motifs, sequences, peaks ----------------------------# #-------------------------------------------------------------------------------------------------------------# @@ -191,6 +196,7 @@ def run_bindetect(args): ################# Peaks / GC in peaks ################ + #Read peak and peak_header peaks = RegionList().from_bed(args.peaks) logger.info("- Found {0} regions in input peaks".format(len(peaks))) @@ -385,9 +391,9 @@ def run_bindetect(args): writer_pool.join() - #--------------------------------------------------------------------------------------# - #---------------- Process information on background scores and overlaps ---------------# - #--------------------------------------------------------------------------------------# + #-------------------------------------------------------------------------------------------------------------# + #---------------------------- Process information on background scores and overlaps --------------------------# + #-------------------------------------------------------------------------------------------------------------# logger.info("Merging results from subsets") background = {} @@ -401,12 +407,13 @@ def run_bindetect(args): background["signal"][bigwig] = np.array(background["signal"][bigwig]) - ## Estimate score distribution to define bound/unbound threshold per condition + ###### Estimate score distribution to define bound/unbound threshold per condition ###### logger.comment("") logger.info("Estimating score distributions per condition") args.thresholds = {} pseudos = [] figures = [] #save figures before saving to file to unify x-ranges + accessible = {} for bigwig in args.cond_names: #Prepare scores (remove 0's etc.) @@ -417,8 +424,17 @@ def run_bindetect(args): x_max = np.percentile(bg_values, [99]) #Fit mixture of normals - gmm = sklearn.mixture.GaussianMixture(n_components=2) - gmm.fit(np.log(bg_values).reshape(-1, 1)) + lowest_bic = np.inf + for n_components in range(1,3): #1/2 components + gmm = sklearn.mixture.GaussianMixture(n_components=n_components, random_state=1) + gmm.fit(np.log(bg_values).reshape(-1, 1)) + + bic = gmm.bic(np.log(bg_values).reshape(-1,1)) + logger.debug("n_compontents: {0} | bic: {1}".format(n_components, bic)) + if bic < lowest_bic: + lowest_bic = bic + best_gmm = gmm + gmm = best_gmm #Extract most-right gaussian means = gmm.means_.flatten() @@ -427,24 +443,27 @@ def run_bindetect(args): log_params = scipy.stats.lognorm.fit(bg_values[bg_values < x_max], f0=sds[chosen_i], fscale=np.exp(means[chosen_i])) #Plot mixture - #plt.hist(np.log(bg_values), bins='auto', density=True) - #xlim = plt.xlim() - #x = np.linspace(xlim[0], xlim[1], 1000) - #for i in range(2): - # pdf = scipy.stats.norm.pdf(x, means[i], sds[i]) - # plt.plot(x, pdf) + if args.debug: + plt.hist(np.log(bg_values), bins='auto', density=True) + xlim = plt.xlim() + x = np.linspace(xlim[0], xlim[1], 1000) + for i in range(2): + pdf = scipy.stats.norm.pdf(x, means[i], sds[i]) + plt.plot(x, pdf) - #logprob = gmm.score_samples(x.reshape(-1, 1)) - #df = np.exp(logprob) - #plt.plot(x, df) - #plt.show() + logprob = gmm.score_samples(x.reshape(-1, 1)) + df = np.exp(logprob) + plt.plot(x, df) + plt.show() #Estimate threshold and pseudocount threshold = round(scipy.stats.lognorm.ppf(1-args.bound_threshold, *log_params), 5) args.thresholds[bigwig] = threshold logger.info("- Threshold for condition {0} estimated at: {1}".format(bigwig, threshold)) - pseudo = round(scipy.stats.lognorm.ppf(0.2, *log_params), 5) + #Mode of distribution + mode = scipy.optimize.fmin(lambda x: -scipy.stats.lognorm.pdf(x, *log_params), 0, disp=False)[0] + pseudo = mode / 2.0 #pseudo is half the mode pseudos.append(pseudo) #Plot fit @@ -453,7 +472,7 @@ def run_bindetect(args): xvals = np.linspace(0, x_max, 1000) probas = scipy.stats.lognorm.pdf(xvals, *log_params) - ax.plot(xvals, probas, label="Log-normal fit") + ax.plot(xvals, probas, label="Log-normal fit", color="orange") ax.axvline(threshold, color="black", label="Bound/unbound threshold") ymax = plt.ylim()[1] @@ -478,15 +497,18 @@ def run_bindetect(args): #Estimate pseudocount if args.pseudo == None: args.pseudo = np.mean(pseudo) - logger.info("Pseudocunt estimated to: {0}".format(round(args.pseudo, 5))) + logger.info("Pseudocount estimated at: {0}".format(round(args.pseudo, 5))) - ####### Foldchanges between conditions ######## + + + ############ Foldchanges between conditions ################ + logger.comment("") log2fc_params = {} if len(args.signals) > 1: logger.info("Calculating log2 fold changes between conditions") for (bigwig1, bigwig2) in comparisons: #cond1, cond2 - logger.debug("- {0} / {1}".format(bigwig1, bigwig2)) + logger.info("- {0} / {1}".format(bigwig1, bigwig2)) scores1 = np.copy(background["signal"][bigwig1]) scores2 = np.copy(background["signal"][bigwig2]) @@ -497,26 +519,74 @@ def run_bindetect(args): scores1, scores2, gcs = scores1[included], scores2[included], gcs[included] log2fcs = np.log2(np.true_divide(scores1 + args.pseudo, scores2 + args.pseudo)) - included = np.logical_and(np.logical_not(np.isclose(log2fcs, 0)), np.logical_not(np.isnan((gcs)))) - - log2fcs, gcs = log2fcs[included], gcs[included] values = np.vstack([log2fcs, gcs]) if values.shape[1] == 0: sys.exit("ERROR: Bigwig values of conditions {0} and {1} are equal or contain only zeroes - please check your input data.".format(bigwig1, bigwig2)) - kernel = scipy.stats.gaussian_kde(values) - log2fc_params[(bigwig1, bigwig2)] = kernel + #Fit mixture to describe relationship between GC/log2fc + lowest_bic = np.inf + n_components_range = range(1,10) + for n_components in n_components_range: + gmm = sklearn.mixture.GaussianMixture(n_components=n_components, covariance_type="full", random_state=1) + gmm.fit(values.T) + bic = gmm.bic(values.T) - #Create plot - fig, ax = plt.subplots() - g = sns.jointplot(x=log2fcs, y=gcs, kind="kde") #, ax=ax) - g.set_axis_labels(xlabel="Log2 fold change", ylabel="GC content") #yaxis and xaxis label - g.fig.suptitle("Background log2FCs ({0} / {1})".format(bigwig1, bigwig2)) - plt.tight_layout() - figure_pdf.savefig(g.fig) - plt.close() + logger.debug("n_compontents: {0} | bic: {1}".format(n_components, bic)) + if bic < lowest_bic: + lowest_bic = bic + best_gmm = gmm + log2fc_params[(bigwig1, bigwig2)] = best_gmm + + #Create plot + nullfmt = NullFormatter() + xmin, xmax = np.percentile(log2fcs, [1,99]) + ymin, ymax = np.percentile(gcs, [1,99]) + + # definitions for the axes + left, width = 0.1, 0.65 + bottom, height = 0.1, 0.65 + bottom_h = left_h = left + width + 0.02 + + rect_scatter = [left, bottom, width, height] + rect_histx = [left, bottom_h, width, 0.2] + rect_histy = [left_h, bottom, 0.2, height] + + #Initialize figure + plt.figure(1, figsize=(8, 8)) + axScatter = plt.axes(rect_scatter) + axHistx = plt.axes(rect_histx) + axHisty = plt.axes(rect_histy) + + #Gaussian mixture + X, Y = np.meshgrid(np.linspace(xmin,xmax,100), np.linspace(ymin,ymax,100)) + positions = np.array([X.ravel(), Y.ravel()]).T + Z = np.exp(best_gmm.score_samples(positions)) + Z = np.reshape(Z, X.shape) + + zmax = np.percentile(Z, [99]) + axScatter.contourf(X, Y, Z, 20, cmap=plt.cm.viridis) + #axScatter.scatter(log2fcs, gcs, s=0.5, alpha=0.5) + + #Histograms + axHistx.hist(log2fcs[np.logical_and(xmin < log2fcs, log2fcs < xmax)], bins='auto', density=True, color="darkslateblue") + axHisty.hist(gcs[np.logical_and(ymin < gcs, gcs < ymax)], bins='auto', orientation='horizontal', density=True, color="darkslateblue") + axHistx.set_xlim(axScatter.get_xlim()) + axHisty.set_ylim(axScatter.get_ylim()) + axHisty.yaxis.set_major_formatter(nullfmt) + axHistx.xaxis.set_major_formatter(nullfmt) + axHistx.yaxis.set_major_formatter(nullfmt) + axHistx.xaxis.set_major_formatter(nullfmt) + + #Decorate + axScatter.set_xlabel("Log2 fold change") + axScatter.set_ylabel("GC content") + axHistx.set_title("Background log2FCs ({0} / {1})".format(bigwig1, bigwig2)) + + figure_pdf.savefig(bbox_inches='tight') + plt.close() + background = None #free up space @@ -549,7 +619,7 @@ def run_bindetect(args): logger.info("Concatenating results from subsets") info_table = pd.concat(results) #pandas tables - index_names = info_table.index + #index_names = info_table.index pool.terminate() pool.join() @@ -604,12 +674,11 @@ def run_bindetect(args): #Cluster distance matrix - #Test index names against names - index_names = info_table.index - for name in names: - if name not in index_names: - logger.info("{0} not in index".format(name)) + #index_names = info_table.index + #for name in names: + # if name not in index_names: + # logger.info("{0} not in index".format(name)) #Plotting bindetect per comparison for (cond1, cond2) in comparisons: @@ -633,7 +702,7 @@ def run_bindetect(args): end_time = datetime.now() logger.comment("") - logger.info("Finished BINDetect run (time elapsed: {0})".format(end_time - begin_time)) + logger.info("Finished BINDetect run (time elapsed: {0}). Results are found in: {1}".format(end_time - begin_time, args.outdir)) diff --git a/tobias/footprinting/BINDetect_functions.py b/tobias/footprinting/BINDetect_functions.py index b33ee4d..e0f45b6 100644 --- a/tobias/footprinting/BINDetect_functions.py +++ b/tobias/footprinting/BINDetect_functions.py @@ -17,6 +17,7 @@ import xlsxwriter import random +#Plotting import matplotlib.pyplot as plt from matplotlib.backends.backend_pdf import PdfPages @@ -39,19 +40,20 @@ def get_gc_content(regions, fasta): """ Get GC content from regions in fasta """ + nuc_count = {"T":0, "t":0, "A":0, "a":0, "G":1, "g":1, "C":1, "c":1} + gc = 0 total = 0 fasta_obj = pysam.FastaFile(fasta) for region in regions: seq = fasta_obj.fetch(region.chrom, region.start, region.end) - gc += sum([1 for nuc in seq if (nuc == "G" or nuc == "g" or nuc == "C" or nuc == "c")]) + gc += sum([nuc_count.get(nuc, 0.5) for nuc in seq]) total += region.end - region.start fasta_obj.close() gc_content = gc / float(total) return(gc_content) - def find_nearest_idx(array, value): idx = np.abs(array - value).argmin() return(idx) @@ -78,22 +80,18 @@ def main_logger_process(queue, logger): return(1) - +""" def norm_fit(x, loc, scale, size): - """ size scales the height of the pdf-curve """ + size scales the height of the pdf-curve return(scipy.stats.norm.pdf(x, loc, scale) * size) + def lognorm_fit(x, s, loc, scale, size): - """ size scales the height of the pdf-curve """ + size scales the height of the pdf-curve - #Calculate norm of distribution - #mode = scipy.optimize.fmin(lambda x: -scipy.stats.lognorm.pdf(x, s, loc, scale), 0, disp=False)[0] - #if mode <= 0: - # y = 100000.0 - #else: y = scipy.stats.lognorm.pdf(x, s, loc=loc, scale=scale) * size return(y) - +""" #---------------------------------------------------------------------------------------------------------# #------------------------------------------- Main functions ----------------------------------------------# @@ -112,8 +110,8 @@ def scan_and_score(regions, motifs_obj, args, log_q, qs): fasta_obj = pysam.FastaFile(args.genome) chrom_boundaries = dict(zip(fasta_obj.references, fasta_obj.lengths)) - gc_window = 200 - rand_window = 200 + gc_window = 500 + rand_window = 500 extend = int(np.ceil(gc_window / 2.0)) background_signal = {"gc":[], "signal":{condition:[] for condition in args.cond_names}} @@ -154,9 +152,11 @@ def scan_and_score(regions, motifs_obj, args, log_q, qs): seq = fasta_obj.fetch(region.chrom, extended_region.start, extended_region.end) #Calculate GC content for regions - num_sequence = nuc_to_num(seq) # Convert to 0/1 gc - boolean = 1 * (num_sequence > 1) - boolean = boolean.astype(np.float64) #due to input of fast_rolling_math + num_sequence = nuc_to_num(seq) + Ns = num_sequence == 4 + boolean = 1 * (num_sequence > 1) # Convert to 0/1 gc + boolean[Ns] = 0.5 # replace Ns 0.5 - with neither GC nor AT + boolean = boolean.astype(np.float64) # due to input of fast_rolling_math gc = fast_rolling_math(boolean, gc_window, "mean") gc = gc[extend:-extend] background_signal["gc"].extend([gc[pos] for pos in rand_positions]) @@ -280,7 +280,6 @@ def process_tfbs(TF_name, args, log2fc_params): #per tf chosen_columns = header[:-no_cond-1] + [condition + "_score"] bed_table_subset.to_csv(outfile, sep="\t", index=False, header=False, columns=chosen_columns) - #### Calculate statistical test in comparison to background #### fig_out = os.path.abspath(os.path.join(args.outdir, TF_name, "plots", TF_name + "_log2fcs.pdf")) log2fc_pdf = PdfPages(fig_out, keep_empty=True) @@ -295,30 +294,36 @@ def process_tfbs(TF_name, args, log2fc_params): #per tf bed_table[base + "_log2fc"] = bed_table[base + "_log2fc"].round(5) # Compare log2fcs to background log2fcs - excluded = np.logical_and(np.isclose(bed_table[cond1 + "_score"].values, 0), np.isclose(bed_table[cond2 + "_score"].values, 0)) + excluded = np.logical_and(np.isclose(bed_table[cond1 + "_score"].values, 0), np.isclose(bed_table[cond2 + "_score"].values, 0)) #exclude 0's from both conditions subset = bed_table[np.logical_not(excluded)].copy() #included subset subset.loc[:,"peak_id"] = ["_".join([chrom, str(start), str(end)]) for (chrom, start, end) in zip(subset["peak_chr"].values, subset["peak_start"].values, subset["peak_end"].values)] observed_log2fcs = subset.groupby('peak_id')[base + '_log2fc'].mean().reset_index()[base + "_log2fc"].values #if more than one TFBS per peak -> take mean value + observed_gcs = subset.groupby('peak_id')["GC"].mean().reset_index()["GC"].values #if more than one TFBS per peak -> take mean value #Resample from background - sampling = log2fc_params[(cond1, cond2)].resample(int(info_table.at[TF_name, "total_tfbs"]*2)) - sampled_log2fcs, sampled_gcs = sampling[0,:], sampling[1,:] + log2fc_params[(cond1, cond2)].set_params(random_state=len(observed_log2fcs)) + sampling, labels = log2fc_params[(cond1, cond2)].sample(int(info_table.at[TF_name, "total_tfbs"]*2)) + sampled_log2fcs, sampled_gcs = sampling[:,0], sampling[:,1] indices = [] - for val in subset["GC"]: + for val in observed_gcs: idx = find_nearest_idx(sampled_gcs, val) indices.append(idx) sampled_gcs[idx] = np.inf bg_log2fcs = sampled_log2fcs[indices] - obs_mean, obs_std = np.mean(observed_log2fcs), np.std(observed_log2fcs) - bg_mean, bg_std = np.mean(bg_log2fcs), np.std(bg_log2fcs) + #Estimate mean/std + bg_params = scipy.stats.norm.fit(bg_log2fcs) + obs_params = scipy.stats.norm.fit(observed_log2fcs) + + obs_mean, obs_std = obs_params + bg_mean, bg_std = bg_params obs_no = np.min([len(observed_log2fcs), 50000]) #Set cap on obs_no to prevent super small p-values #If there was any change found at all (0 can happen if two bigwigs are the same) if obs_mean != bg_mean: - info_table.at[TF_name, base + "_change"] = (obs_mean - bg_mean) / bg_std #((bg_std + obs_std)*0.5) #effect size + info_table.at[TF_name, base + "_change"] = (obs_mean - bg_mean) / bg_std #effect size info_table.at[TF_name, base + "_change"] = np.round(info_table.at[TF_name, base + "_change"], 5) #pval = scipy.stats.mannwhitneyu(observed_log2fcs, bg_log2fcs, alternative="two-sided")[1] diff --git a/tobias/plotting/plot_aggregate.py b/tobias/plotting/plot_aggregate.py index 523cc22..65a1742 100644 --- a/tobias/plotting/plot_aggregate.py +++ b/tobias/plotting/plot_aggregate.py @@ -67,10 +67,14 @@ def add_aggregate_arguments(parser): def run_aggregate(args): + """ Function to make aggregate plot given input from args """ begin_time = datetime.now() + #Check input parameters check_required(args, ["TFBS", "signals"]) + check_files([args.TFBS, args.signals, args.regions, args.whitelist, args.blacklist], action="r") + check_files([args.output], action="w") #### Test input #### if args.region_names != None and (len(args.regions) != len(args.region_names)): @@ -89,7 +93,7 @@ def run_aggregate(args): args.TFBS_names = [os.path.splitext(os.path.basename(f))[0] for f in args.TFBS] args.region_names = [os.path.splitext(os.path.basename(f))[0] for f in args.regions] if args.region_names == None else args.region_names args.signal_names = [os.path.splitext(os.path.basename(f))[0] for f in args.signals] if args.signal_names == None else args.signal_names - #args.output = os.path.abspath("signal_aggregate.pdf") if args.output == None else os.path.abspath(args.output) + args.output = os.path.abspath(args.output) ######################################################################################### @@ -111,11 +115,13 @@ def run_aggregate(args): ############################ Get input regions/signals ready ############################ ######################################################################################### + logger.info("Reading information from input files") + #Make combinations of TFBS / regions column_names = [] if len(args.regions) > 0: - logger.info("Overlapping regions") + logger.info("Overlapping sites to --regions") regions_dict = {} combis = itertools.product(range(len(args.TFBS)),range(len(args.regions))) @@ -144,7 +150,6 @@ def run_aggregate(args): regions_dict = {args.TFBS_names[i]: RegionList().from_bed(args.TFBS[i]) for i in range(len(args.TFBS))} - #-------- Do overlap of regions if whitelist / blacklist -------# if args.whitelist != None or args.blacklist != None: logger.info("Subsetting regions...") @@ -179,7 +184,7 @@ def run_aggregate(args): # Print number of sites for regions_id in regions_dict: - logger.info("{0}: {1}".format(regions_id, len(regions_dict[regions_id]))) + logger.info("{0}: {1} sites".format(regions_id, len(regions_dict[regions_id]))) @@ -322,6 +327,8 @@ def run_aggregate(args): #------------- Finishing up plots ---------------# + logger.info("Adjusting final details") + #remove lower-right corner if not applicable if no_rows != no_cols: axarr[-1,-1] = None @@ -364,6 +371,8 @@ def run_aggregate(args): plt.savefig(args.output, bbox_inches='tight') plt.close() + logger.info("Finished PlotAggregate! Output file is: {0}".format(os.path.abspath(args.output))) + #--------------------------------------------------------------------------------------------------------# if __name__ == '__main__': diff --git a/tobias/plotting/plot_heatmap.py b/tobias/plotting/plot_heatmap.py index bb159a6..efe9173 100644 --- a/tobias/plotting/plot_heatmap.py +++ b/tobias/plotting/plot_heatmap.py @@ -89,6 +89,7 @@ def run_heatmap(args): parser = add_heatmap_arguments(argparse.ArgumentParser()) logger.comment(arguments_overview(parser, args)) + ######################################################## #Check valid input parameters (number of input TFBS vs. bigwig etc.) @@ -96,6 +97,9 @@ def run_heatmap(args): no_columns = len(args.show_columns) no_TFBS_col = len(args.TFBS) + if no_TFBS_col > 1 and len(args.show_columns) > 0: + sys.exit("Error: option --show_columns is not available for multiple --TFBS inputs.") + if no_TFBS_col > 1 and no_signals != no_TFBS_col: sys.exit("Error: Number of --TFBS does not match number of signals") @@ -111,6 +115,7 @@ def run_heatmap(args): for i, signal in enumerate(args.signals): logger.info("Using {0} with signal from {1}".format(args.TFBS[i], signal)) + ###logger overview of bedfiles per column? @@ -133,7 +138,8 @@ def run_heatmap(args): seen_bed = [] #Read regions per heatmap in grid - logger.info("#------ Reading bedfiles ------#") + logger.comment("") + logger.info("Reading bedfiles") for col in range(len(heatmap_info)): for row in range(len(heatmap_info[col])): @@ -179,7 +185,7 @@ def run_heatmap(args): #Logger info about bedfile if heatmap_info[col][row]["bed_f"] not in seen_bed: - logger.info("Read {1} sites from {0} of width {2}".format(heatmap_info[col][row]["bed_f"], len(heatmap_info[col][row]["regions"]), heatmap_info[col][row]["width"])) + logger.info("- Read {1} sites from {0} of width {2}".format(heatmap_info[col][row]["bed_f"], len(heatmap_info[col][row]["regions"]), heatmap_info[col][row]["width"])) seen_bed.append(heatmap_info[col][row]["bed_f"]) @@ -187,7 +193,8 @@ def run_heatmap(args): #------------------------------ Signals from all sites ------------------------------# #------------------------------------------------------------------------------------# - logger.info("#----- Reading signals from bigwigs ------#") + logger.comment("") + logger.info("Reading signals from bigwigs") for col in range(len(args.TFBS)): bigwig_f = heatmap_info[col][0]["bigwig_f"] #bigwig is the same for all rows, therefore row == 0 @@ -195,7 +202,7 @@ def run_heatmap(args): for row in heatmap_info[col]: - logger.info("Reading {0} from {1}".format(heatmap_info[col][row]["bed_f"], bigwig_f)) + logger.info("- Reading {0} from {1}".format(heatmap_info[col][row]["bed_f"], bigwig_f)) if len(heatmap_info[col][row]["regions"]) > 0: heatmap_info[col][row]["signal_mat"] = np.array([region.get_signal(pybw) for region in heatmap_info[col][row]["regions"]]) @@ -206,7 +213,7 @@ def run_heatmap(args): pybw.close() - + logger.comment("") #------------------------------------------------------------------------------------# #---------------------------------- Colorbar min/max --------------------------------# @@ -267,11 +274,12 @@ def run_heatmap(args): ##################################### PLOTTING ####################################### ###################################################################################### + #------------------------------------------------------------------------------------# #------------------------------------ Set up plots ----------------------------------# #------------------------------------------------------------------------------------# - logger.info("#----- Setting up plots ------#") + logger.info("Setting up plotting grid") total_columns = no_signals + no_columns xvals = np.arange(-args.flank, args.flank) @@ -333,7 +341,7 @@ def run_heatmap(args): #--------------------------------- Fill in plots ------------------------------------# #------------------------------------------------------------------------------------# - logger.info("#----- Plotting heatmaps ------#") + logger.info("Filling in grid") #Colormaps for col, bigwig in enumerate(args.signals): @@ -375,14 +383,24 @@ def run_heatmap(args): #------------------------------------------------------------------------------------# if args.plot_boundaries: + for col in heatmap_info: - for ax in axarr: - + motif_len = heatmap_info[col][0]["width"] mstart = int(-np.floor(motif_len/2.0)) mend = int(np.ceil(motif_len/2.0)) - ax.axvline(mstart, color="black", linestyle="dashed", linewidth=1) - ax.axvline(mend, color="black", linestyle="dashed", linewidth=1) + axdict[col]["aggregate"].axvline(mstart, color="black", linestyle="dashed", linewidth=1) + axdict[col]["aggregate"].axvline(mend, color="black", linestyle="dashed", linewidth=1) + + for row in heatmap_info[col]: + + motif_len = heatmap_info[col][row]["width"] + mstart = int(-np.floor(motif_len/2.0)) + mend = int(np.ceil(motif_len/2.0)) + + axdict[col][row].axvline(mstart+args.flank, color="black", linestyle="dashed", linewidth=1) + axdict[col][row].axvline(mend+args.flank, color="black", linestyle="dashed", linewidth=1) + #Add legend to aggregate plots for col in range(len(args.signals)): @@ -390,23 +408,11 @@ def run_heatmap(args): if args.share_colorbar == True: - ymin = min([axdict[col]["aggregate"].get_ylim()[0] for col in heatmap_info]) - ymax = max([axdict[col]["aggregate"].get_ylim()[1] for col in heatmap_info]) - for col in heatmap_info: + ymin = min([axdict[col]["aggregate"].get_ylim()[0] for col in range(no_signals)]) + ymax = max([axdict[col]["aggregate"].get_ylim()[1] for col in range(no_signals)]) + for col in range(no_signals): axdict[col]["aggregate"].set_ylim([ymin, ymax]) - """ - #Plot TFBS boundaries - if TFBS["bound"]["no_sites"] > 0: - motif_len = TFBS["bound"]["regions"][0].end - TFBS["bound"]["regions"][0].start - else: - motif_len = TFBS["unbound"]["regions"][0].end - TFBS["unbound"]["regions"][0].start - - mstart = int(-np.floor(motif_len/2.0)) - mend = int(np.ceil(motif_len/2.0)) - - """ - #------------------------------------------------------------------------------------# #----------------------------- Finish off and output --------------------------------# @@ -423,11 +429,11 @@ def run_heatmap(args): plt.subplots_adjust(top=0.95) plt.suptitle(args.title, fontsize=25) - logger.info("Writing output to {0}".format(args.output)) + logger.info("Writing output file") plt.savefig(args.output, bbox_inches='tight') plt.close() - logger.info("\n#----- Finished ------#") + logger.info("Finished PlotHeatmap! Output file is: {0}".format(os.path.abspath(args.output))) #--------------------------------------------------------------------------------------------------------# diff --git a/tobias/utils/utilities.py b/tobias/utils/utilities.py index 4341849..6434d7e 100644 --- a/tobias/utils/utilities.py +++ b/tobias/utils/utilities.py @@ -260,7 +260,7 @@ def check_files(lst_of_files, action="r"): with open(fil, "w") as f: pass except: - sys.exit("ERROR: Could not open file \"{0}\" for writing".format(fil)) + sys.exit("ERROR: Could not open file \"{0}\" for writing. Please check that you do not have the file open and that you have write permission.".format(fil)) def make_directory(directory): if not os.path.isfile(directory) and not os.path.exists(directory):