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GLI1_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/GLI1_UP.V1_DN COPZ1 C10orf46 C20orf118 TMEM181 CCNL2 YIPF1 GTDC1 OPN3 RSAD2 SLC22A1 LIN37 RNF10 RUNX1 QRICH2 SEPT9 ARPC2 CD2AP ACSL6 ZMYND11 BBX TMEM62 FOLR1 TMEM189 PPIL1 CYP3A7 SELM ESYT1 BTBD16 SPECC1
GLI1_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/GLI1_UP.V1_UP IGFBP6 HLA-DQB1 CCND2 PTH1R TXNDC12 M6PR PPT2 STAU1 IGJ TMOD3 SAR1A PLXNA2 ZBTB16 YBX1 SGTA CSGALNACT1 WEE1 TRIM23 POFUT2 C16orf45 IFT74 PRKD3 PPAPDC2 FEM1A LMO7 C7orf50 ZC3H18
E2F1_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/E2F1_UP.V1_DN TGFB1I1 CXCL5 POU5F1 SAMD10 KLF2 STAT6 ENTPD6 VCAN HMGCS1 ANXA8 POLD4 HES6 LIMA1 FGF19 RALGDS SNAPC3 IFT20 AVPI1 SERPINA3 RAB11FIP5 IL1RL1 CSF1 ZC3H12A ALDH3A1 ADAMTS1 PDGFRA TGFB3 TNXB SYNPO SLC6A8 KLF3 PPTC7 CXCL1 ALAS2 FAS SCAMP1 ABLIM1 CCL9 CXCR7 MOSC2 C1orf63 EBF1 PLAT CCL2 CCNG2 SERTAD1 F3 TRAF3IP2 CYP1B1 ANGPTL4 RGS2 SLC1A1 VPS45 USP19 XBP1 SEC23A LIPE AQP8 DTX2 BCL6 LXN SERAC1 DOK1 FCHO1 PGD LRIG1 LCLAT1 B4GALT3 LBP COL3A1 WDFY2 PTGS2 PLXND1 ANKHD1 IFIT2 TRAPPC4 TUBG2 PKD1 APBB1IP MDN1 SLPI EFNA4 ST3GAL4 NHSL1 IL18 LGALS2 XPR1 ALDH1A1 C11orf83 C3 C11orf34 PPP3CA ADARB1 TRIB3 PDE4DIP TSHR AMPD3 FER ANXA1 STOM C5orf41 ITPR2 SIX5 NDRG4 GADD45A CD47 TANK TRIM41 RAP2B PLK2 CPT1A SEMA4B RASA3 GSTA4 IL1R1 PAK3 IDH1 MMP7 APC2 UNC93B1 NOTCH2 GHR PTDSS2 UBE2H SASH1 PLIN2 ATP2A3 TGM2 PDZK1IP1 BAG3 LAMA4 GFRA1 CCND2 ARL4D MX1 NFKB1 EVI2A GBP2 TCF4 HLA-E CRIP2 ERBB3 STAC PHLDA1 MCL1 EPS8 SGK1 ANXA4 CAPN2 SDPR CALML4 DCAF8 IL6ST PTGS1 ZMYND8 STX4 ZFR2 NEAT1 STAT3 APBB2 MLL5 MDK WDR26 RUNX2 ASL TMEM45A SLC35E4 CYTIP HBG2 ZBTB20 FMO3 RUNX1T1 C18orf8 MYC ACOX1 COL11A1 DAB2 CHRNA7 PLA2G4A A4GALT SLC11A2 CIRBP CD3E RTKN RAB9A PSEN2 NFKBIZ JUB MLX C19orf50 NUMA1 SNAI1 NPR1
E2F1_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/E2F1_UP.V1_UP RRP1B HES1 ADCY6 CHAF1B VPS37B GRSF1 TLX2 SSX2IP DNA2 CMA1 ZFPM1 CLN6 CASP7 BOK PITPNM1 EFNB2 CAPRIN2 MTSS1L KLHL21 TLE4 LOC202152 NUP43 EZH2 SRSF4 DLX1 PPM1M SLC20A1 KRT72 LMNB1 THOP1 ZSWIM7 GRWD1 HSPBP1 NAB1 CDK5R1 ACTN3 FNBP1 CYBA PTPRU PBX3 TPD52 ARHGEF1 MCM10 BRCA2 PRM1 DCTPP1 PACS1 RELL1 FAM60A ELAVL1 INO80E TINF2 MAP3K3 PRIM2 SIRPA EIF6 RBM22 EVL UBR2 KPNA3 MRPL46 NCAPH ART3 PRADC1 WDHD1 E2F8 DDX46 TBP CCDC164 TOP2A SDCCAG3 ATP5D TK1 HDGFRP2 NASP RB1 GUF1 TAF6 VPRBP ERMP1 SLC35E1 TYRO3 DNAJC2 KIF2A NDUFAF4 CNIH2 WBP11 SLC9A3R1 VEGFA MXI1 TRNT1 IVNS1ABP FRAT2 PKP4 USP39 SGOL1 PSME3 MPG TYMS GPN2 GATA6 AURKB ADA RBM15 MFI2 UBE2T DFNA5 CNOT7 PARP1 SHBG ARF3 CSTF2 PIGA BUB1 TAF9 BCL2 VPREB3 RHBDL3 HMGB3 FMNL3 POLA2 USF2 PARP16 RDH13 ITSN1 ERCC2 LPIN2 NOLC1 SLC7A1 TFAM RND2 UQCC CRYZ MASP1 BOLA3 HSPB2 C4orf27 PRC1 USP10 TRAF3 ELANE NBL1 SOCS2 PIP4K2A UCK2 EIF2C2 ARHGAP39 SLBP DBF4 DLGAP5 KPNA1 KANK3 CDV3 DNAJC21 FANCM ARHGAP8 PTPN21 CHEK1 SPEF1 FEN1 INO80C UBN1 PIM1 KIFC1 PHF12 PLK4 MSH3 CDR2L CCRN4L NOP56 PAIP2B UPK2 TPM2 DMBT1 LARP4B SMAD1 MCM4 WRN MAPK14 CAD DDB1 GPR19 MED20 SMC2 E2F3 RRM1 ADIPOR2 STIL MAP3K11
EGFR_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/EGFR_UP.V1_DN NPY1R PDZK1 GFRA1 GREB1 MSMB DLC1 MYB SLC6A14 IFI44 IFI44L GPER IRS1 CYBA GULP1 EGR3 FAM50A MDK BCL2 HIST1H3H IFI27 HIST1H2AC GALC WISP2 IFI6 EFHD1 HIST1H2BH ARMCX1 PRKACB HIST1H2BE ID2 TTC39A BTG3 OSR2 ADD3 TCN1 KIF5C HIST1H2BG SYCP2 ZNF107 KIAA1324 HIST1H2BF FTO CALB2 EFNB2 ZNF43 SPTBN1 POLI XK HIST1H4H CELSR2 RNF43 SGCB ASCL1 PCYOX1 NRIP1 INPP5F RHOBTB3 ELOVL5 SLC27A3 DCAF6 MICB CLK4 HIST1H1C PEG10 DTL APBB2 KIAA0430 SSFA2 MATN2 MFF HIST1H2BI POT1 PTBP2 HERC6 C16orf45 EIF2S3 DEPDC1 ANK3 WIPF1 DDX60 FAM115A HIST1H2AG SLC1A1 DERA CSTA PRR15L SGCG HSPA4L PDCD4 IGF1R FANCL OVOL2 SMAD7 BRIP1 GTF2I BDH1 COL9A3 ELF5 SOX3 CAV1 H2BFS NDUFA5 EZH2 AGL TMPRSS3 CTSH SIGMAR1 BST2 IAPP ARMC9 E2F8 TRIM24 CHN1 C5orf13 BDKRB2 ODZ3 ELOVL2 SNX7 PGR HIST1H2BD NMU CBR4 ZSCAN18 CADM1 NCAPG2 CXCR7 KIF11 ABLIM1 LLGL2 PSPH DMXL2 CASP6 HIST1H2AE TMEM106B NUP205 GRB10 ENPP4 MOCOS MAFB CDKN2AIP C9orf3 C18orf8 TMEM48 CBFA2T3 ALG13 TSC22D3 MPDZ CALCR MEX3D CPE ANXA9 ARL3 TSPAN5 DNAJC12 GPATCH1 PCMTD2 MLF1IP PRR7 RASGRP1 CYP26B1 KRIT1 ZNF273 PDLIM3 PRPF6 PRKD3 BAZ2B NET1 HIRA RFWD3 SH3GLB2 LTBP1 RCN1 TAF12 LTN1 EPS8 SGK3 SATB2 TBL1XR1 KIAA1467 RUFY1 TMEM187 SLC39A8 ID1 BRCC3 PHF20 ARL4A ANGEL2 RPP25 NME3 HEBP1 STIL EPB41L2 ATF7IP SLC27A2 METTL3 GOLGA8A
EGFR_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/EGFR_UP.V1_UP FGG GBP1 TNFRSF11B FGB GJA1 DUSP6 S100A9 ADM ITGB6 DUSP4 GCNT1 A2M ASPH CYP1B1 CMAHP TNFAIP8 CSGALNACT1 KIAA1199 LPAR6 GLRX EPAS1 MMP1 PLAC1 RND1 CEACAM6 INHBA IGF2BP2 GRAMD3 PTPRE TNFRSF21 F2RL1 IRF1 CEBPD MPZL2 ETS2 ELL2 EGLN3 S100A8 EGFR RCAN1 LIF LOXL2 ATXN1 EXT1 DRAM1 CXADR CLDN1 PLAGL1 GAL ANKRD57 MGAT4A PCDH9 CAPN2 CYR61 SDCBP IDO1 MALL MIR22HG ETV5 VAV3 CCL2 MAP3K5 ELK3 SGPP1 CYP27B1 PDE4B CASP7 ERO1L ZNF281 SLC7A11 TNS3 SLCO2A1 FERMT2 DUSP5 KRT81 COTL1 TFPI HBEGF SNX16 ISG20 SPAG1 MAOA SAMD4A FHOD1 SEL1L3 TAP1 RNF19A IL4R PSMB9 WIPI1 WNT5A ABCC3 AKAP12 GCLM SOCS2 CCDC68 MBNL2 KTN1 FADS3 CCL22 PGM3 SLC4A7 KRT7 IFIT3 TUBB2A FNDC3B IL1R1 TBC1D8 KCNS3 HK2 GBP2 BCL3 CRISPLD2 EDN1 SQRDL RHOQ TGFB2 SEPT10 SEC23A BACE2 SAT1 GABBR2 APOBEC3B IQCG C8orf4 IL15RA SOD2 PAPSS2 EIF2C2 ANGPTL4 BMP7 PSMB10 P2RY6 MEIS3P1 LRRC16A ATF3 GK ACTG2 LRP8 ALAS1 SLC9A6 ARAP2 GK3P RAB27A FGFR3 TMEM45A C11orf75 TAF1A HSPA2 MMP10 TNNT1 RGS16 PHLDA1 ICAM1 AOX1 SCCPDH HOMER1 NT5C2 PMAIP1 CBLB KLF4 KIAA0247 MAP2K4 ARID5B ENPP1 ITGA2 SLC12A2 ARFGAP3 NFKB2 JUNB CADPS2 TMEM121 DBNDD2 SPTLC2 RPS6KA3 S100P SNAPC1 ETHE1 IMPA1 LPP PIGA LHFPL2 LPIN1 MGLL ITGA3 ARNT2 CTNNAL1 CTGF HIVEP2 PDLIM7 COL5A2 NFIL3 SGMS1
ERB2_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ERB2_UP.V1_DN NPY1R PDZK1 ANXA3 GREB1 HSPB8 DLC1 NRIP1 FHL2 EGR3 IFI44 SLC6A14 RAB31 IFI44L IFI27 IFIT1 DDX58 MSMB ARHGAP29 CLIC3 MYC SLC26A2 PMAIP1 IFIH1 GULP1 TFPI2 GFRA1 RHOBTB3 GPER ADAM9 MYBL1 BCL2 DDX60 WISP2 TM4SF1 KCTD3 HERC6 IGF1R ZNF107 MGP SSFA2 INPP5F CAV1 IRS1 CHD1 JAK2 TCN1 HAUS3 AGL ZNF43 ATF1 EIF2S3 HSPA4L ASS1 CCDC165 MATN2 POLI KANK1 ACTR6 RPAP3 MYB PTBP2 DNAJB14 CALB2 TTC35 NRCAM AMIGO2 ZNF267 IFIT5 LTN1 MAP4K3 MTERFD1 RIF1 SSB HIRA RPRD1A WDR43 LIN7C TTK ARMCX1 RNF138 CETN3 SMAD7 C18orf8 KRR1 DTL ABLIM1 C16orf45 XK LPGAT1 PRMT3 IFT57 ZCCHC2 BTG3 NOL8 PRKAR2B ADD3 GNL2 CENPE TIAM1 NAA15 ALG13 ZBTB10 ZNF84 BRWD1 FBXO5 STK17A PSPH MBNL2 SS18 NCAPG MAD2L1 CASP6 RBBP8 ECT2 HSPA13 FOLR1 KLF10 CBR4 NOC3L SLC7A2 ASCL1 ANKRD12 MPDZ OAS2 TAF1D TOPBP1 RAD54B RTCD1 ATP8B1 GOLGA4 CYP26B1 PUS1 C1orf109 LAMB1 TMED5 PEG10 OAS1 ID2 USP16 C9orf95 C9orf3 MRPL19 COL9A3 RMI1 RALGAPA1 MTIF2 GOLGA8A ERI2 UBA6 SMC3 LRIG1 FASTKD1 SLMO2 TAF2 ZBTB11 C12orf24 NPEPPS RANBP6 KIF5C RRN3 DEPDC1 HS2ST1 STIL BST2 FKTN RASGRP1 CEBPZ SMARCA5 EHBP1 ARMCX5 PLK4 ZNF430 WIPF1 RRP15 MSH2 MED17 CUL5 RECQL TTC39A KIAA0528 PLA2G12A ATR AASDHPPT CCDC59 IFI6 KIAA0947 CPOX PAK1IP1 RAD51AP1 TRMT61B FLNB C6orf211 MARCH7 DBF4 IRF7 IAPP FAM18B1
ERB2_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ERB2_UP.V1_UP CYP1A1 CEACAM5 FAM129A TNFRSF11B DUSP4 CYP1B1 UPK2 DAB2 CEACAM6 KIAA1199 CSGALNACT1 S100A6 HSD17B11 EPAS1 EGLN3 IL1R1 SLC2A10 KRT81 SGPP1 VTCN1 FGF13 ATP6V0A4 DUSP6 ALDH4A1 KRT7 CXCR4 BCL3 GABBR2 SERHL KCNN4 GALNT12 SERHL2 AKR1B10 GUCY1A3 PTPRE ENO2 CADPS2 ST13 PDE4B CRLF1 IL8 PTMS PLEKHB1 PCDH8 UPK3B TPK1 ST6GALNAC2 ASPH ITGB6 MAOA BACE2 NPC2 TNFRSF21 ETV5 ALDOC SCCPDH SPAG4 BCAM DNAJC4 PCDH1 ST8SIA4 SOX9 KMO CLMN SPTBN2 DOCK10 UPK1A LAMB2 SLC12A2 B3GALT4 RFTN1 S100P FADS2 ZNF467 PARM1 PACS1 MIA3 TNNT1 FMO5 MUC1 GUCY1B3 ARNT2 MGAT4A PNRC1 EPHX1 LIMCH1 ANGPTL4 PAPSS2 ITGB4 VIPR1 NNT OPN3 HSPA2 SCAMP4 ANXA6 VWA1 P4HA2 SERPINA1 RAB5C VEGFB MSX2 PTPRU SEPT10 CAPN5 EDN1 PPAP2C PTOV1 FAM46C ABCC3 ACHE CA8 ABCG1 DBNDD2 FGFR4 MPZL2 TTC9 TBC1D8 RRAGD WIPI1 CXADR MALL GRAMD3 LMO3 SLC9A6 DRAM1 PPP1R3C C1orf115 SH3GLB2 ZNF365 PPAP2A FER1L4 GDF15 LRP5 C8orf55 PDE4D CAST MYO1D MUC3B APLP1 GAMT LOXL1 TCEA2 AKR1C2 UROS RPRM FAM174B CAMK2N1 CDS2 NME4 TSPAN1 SLC6A6 MXRA7 CHST11 APOBEC3B APH1B GBF1 SDCBP SLC9A3R2 PACSIN3 PRPS1 NDRG1 HEY1 BMPR1B CSTA GDPD3 CREB3L2 ANKMY2 SAT1 MVD PTGER4 GNAI2 NOTCH3 BNIP3L METRN ATXN1 MPI AQP3 EPB41L4A KCNMA1 PGPEP1 CAPN2 ULBP2 HOXB7 CNOT8 PCSK1N BCL6 MAPRE3 KIAA0513 C1QTNF9B-AS1 VASP DHRS7B
GCNP_SHH_UP_EARLY.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/GCNP_SHH_UP_EARLY.V1_DN SRRM2 KIAA1217 DEFA1 DLK1 PITX2 CCL2 UPK3B SEZ6 TAF15 EMP1 SH3BGR CCR2 VAV1 LGALS9 WIPF1 LYST RRAGD CPT1A C4orf32 MAN2B1 WWC2 TXLNG CNGA2 NPPB MYO5B XIAP HOXB9 FAM208A PEX7 SOX18 CCRL2 NR6A1 CITED2 LTBP3 EEPD1 SIM1 MS4A4B PAM16 CRABP2 PPFIBP2 CYBA RAMP1 TM4SF1 LIN9 ASPH UBTF PIGT EOMES GBP7 MERTK MAP3K12 IL1R1 HAS2 SLC43A3 CBX1 GLB1L PHLDB2 GPR19 GUSB CRYGS DBP VPS54 FRMD5 DCAF8 BTD ADCY9 SIX4 PLA2G10 SLC6A4 GCET2 CBFA2T3 GABRA1 S100A9 LAT2 SMYD5 MX2 AKR1C1 PLK2 PDE1B ID2 HOXB3 GAPDHS IER2 DDB1 ADAM7 ETS1 CDK5RAP3 POLD4 ITGA4 FOXA1 PEPD AMOTL2 CALCR BPIFB1 MAF EGR1 CYP27B1 C19orf2 HTRA3 LCP1 ACSS1 SETDB1 BTC NOTCH1 NR5A2 LRRC57 TM2D1 RABAC1 DPPA4 CNN1 JPH3 MAP4K4 CD38 SLC22A6 MIPOL1 NLRX1 GDF3 ZNF436 TIRAP CFB MST1R NUB1 HIST2H2BE IFNG UROS POPDC3 ERO1LB GRIN1 PPY HES1 UIMC1 CAMLG LRRC23 SLC7A3 C4BPA PPP2R3C CDK5 MGP STS PCBD2 IRF3 RAG2 GABRD ANKRD44 TERF2IP CCL27 LCLAT1 MIIP TMPO AGTR2 ELMOD3 GNA14 JAM3 RSPO2 AIM1 PTGER3 LSR NSUN3 MAP2K1 TMEM160 ZNF518B NR4A2 PCP2 TMEM176A DDX3Y C11orf9 LAMB3 PLA2G4A HTR1A
GCNP_SHH_UP_EARLY.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/GCNP_SHH_UP_EARLY.V1_UP TOP2A TINF2 MYB SGOL1 MCM10 ADCY6 PRC1 RLIM FIP1L1 GNL3 POLA2 KIFC1 KIF4A TYMS DNAJC3 FBXO45 TOP2B KRT26 ATF1 MYT1L UQCC PDS5B DCPS RC3H2 SOX10 ZZZ3 SRSF10 ARHGAP8 E2F8 LARP7 NVL LUC7L3 NAP1L1 RBM39 E2F3 JMJD8 MPDZ MCM6 TNNC2 ICAM5 DHFR TNPO1 AURKB ZNF281 IRF5 LBR HMGCL ANKRD13C VPRBP C13orf15 AFF4 CLIP4 MRE11A ELOVL2 TBP SDC3 KCNJ4 CCDC99 SEC62 MATR3 GPATCH2 CKS2 NTHL1 MBTD1 STAG2 NEK9 VHL RUNX1T1 KIAA2013 SLC23A2 COX7B EPB41L4B KIF1A RPL39L RHPN2 MRPL50 STYX CD2BP2 GGPS1 XPO1 ARHGEF1 KRT12 SMC2 DOLPP1 FOXK1 PRMT10 MSH6 CCNJ STAT5A RBBP6 SLC27A1 ADAMTS1 AURKA BEX4 PUM2 RYK DHODH GTF2H1 CXorf38 MT4 RIMKLB NUP107 CYP2C8 OXSM ANLN CD276 ARL5A SRSF1 PLCG2 TSHB STRN3 FEN1 DIO1 SNAPC2 HDGFL1 SNORD22 CSF1 UBE2T SLC35E1 KRTAP6-3 SHC1 REG1A LATS1 RNF103 TIA1 LOC645638 MRPL9 VPS4B FOSL1 LUC7L2 MAN1A1 INTS7 PROL1 TRAIP DARS MBL2 PARG SEH1L IRF6 CHEK1 KBTBD7 FNBP4 RRM1 CD55 PPP1CB MAPK14 OVGP1 NR0B1 CDC23 SHE MCM5 MTA1 NCAM2 OBFC2A MLLT10 C7orf70 CR2 TMPRSS2 CLCN6 ABCB10 CNOT2 BCKDHA PHTF2 ATL2 AZIN1 UPF3B LOXL2 OXNAD1 KIF1B FCGRT RETN FTSJ3 C9orf69 FNTB
GCNP_SHH_UP_LATE.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/GCNP_SHH_UP_LATE.V1_DN GNPTAB DOK1 STX2 CD52 FRRS1 LTC4S H2AFJ KLK8 MEF2A SNX21 SLC19A1 FMO1 RAB34 MLLT1 LAMC2 NACC2 TNNC1 NMI PDCD7 KPNA1 IL4R RHD ATAD3A AGER ART5 TCEA2 ANXA7 SLC11A1 TNNC2 ZIK1 TTC23 PAK4 MDFI CNN2 KIAA1161 ZNHIT2 EIF6 TMEM214 ARAF FOXD3 ADCY9 PTPN18 CDHR5 MIIP HTR3A DLX5 C7orf74 PITX3 VIPR2 FAM82A2 SLC25A47 PEMT ITGAE NDUFA10 CLCN6 AMOTL2 CNN1 UBE3C ESRP1 RBKS SH3BGRL2 DHRSX WNK2 DLG4 LTA MRPL3 KANK3 GP1BA PTPRJ NBEAL2 PTPRU PSMB8 ACOT1 SERPINF1 VEGFC ZFYVE19 GRIN2C IRF9 GRB7 PTH1R SLC2A1 ADAM7 PARP8 SLC25A45 CDCP1 EIF4ENIF1 PPFIA4 LGALS2 TGFB3 STX1A MAN2B1 NCOA6 ACTN4 PPM1M NPTN WIPI2 WLS SELL CNGA2 PIP5K1A BCL2L2 ITGA7 S100A11 NRP2 CX3CL1 VSNL1 ADH1A S1PR1 DHODH PTGER4 CD276 MAP3K2 DSCR8 S100A13 ENPP1 ZDHHC5 FZD9 MUC3A GLA COX6A2 KLK6 SAT1 ADRB2 AXIN1 LYSMD1 SLC30A3 NECAP2 RBBP6 IKBKG EYA1 VNN1 ARG1 HYOU1 LOR F8A1 EPHA3 NUDT1 ARID3A SOX18 LGALS4 LSR GJB6 DPPA5 ANKRD33B B3GAT3 CLRN3 WWC1 UBE2V2 FAHD1 EDN1 OGG1 NTHL1 STX3 GPR3 PDZK1IP1 C19orf60 ACVR1 SSBP4 POLD4 PLD2 MED12 CSF2RBP1 PUS1 NCOA7 DDA1 EPB41L4B FAM111A RP9 AGTRAP GCM2 EEPD1 TBC1D1 PITPNM1 EPHB6 TUBA4B EBI3 IKZF1 ZC3H12C FCGRT HSPG2
GCNP_SHH_UP_LATE.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/GCNP_SHH_UP_LATE.V1_UP TK1 E2F8 DDX39A MCM5 MCM4 TOP2A HNRNPA3 UNG FAM60A C1orf174 ARL5A FTSJ3 AURKB COX7B RRM2 MCM6 CDC25C PIK3CA TMOD3 SGOL1 SRSF1 SRSF10 AURKA METTL11A RLIM DNM1L CASP4 SSX2IP SDC2 YTHDF3 USP39 GNL3 COPB1 PTPRCAP ZKSCAN1 SIX4 PRC1 YWHAE NOP56 VPRBP CDK1 PCSK2 MOB1A SACM1L CCND2 VPS4B BOK LEFTY1 SYT4 SLC29A1 CD80 IDH2 RYK SERPINB9 CFDP1 NAA15 GBP2 ZFX SMC4 MCM10 PAN2 LARP7 SOCS2 ASB3 MYB TM9SF3 EIF3A CDC25A CD6 GFM2 DES RRM1 POLA2 ZNF281 TIMM8A TEAD3 CASD1 PFDN6 CHP VCAN KIFC1 HNF1A MAGOH DLGAP5 CYP4B1 SQRDL SLC23A2 LBR FBXO11 FANCM ZNF644 SLTM LLGL2 IGF2 ELOVL2 CKS2 FAM165B PHTF2 NPM1 NPAS1 MRPL18 POLRMT CCR2 CDCA7 UFD1L ATAD2B LOXL2 NPTX1 SPOP CLIP4 CD5 PSME4 IVNS1ABP MPHOSPH10 PLK2 FANCC MBD2 EIF2A ABCE1 MATR3 NXF1 NUSAP1 PTCD3 LIG1 SMC2 PCNT CLCN5 TARDBP INCENP MDN1 LUC7L3 TOP2B CXorf26 MRTO4 FOXA1 MIOS PVRL2 TNFSF11 FRMD6 SLC7A6 C4orf52 PLEKHA7 NKX2-2 CHEK1 MAP3K7 P2RY2 PSMC3IP LRRC23 TRIP13 ELAVL2 GART SFRP1 STRN3 SLC12A1 NAA30 DIDO1 ZNF638 METAP1 FMR1NB HIGD1A MUC1 NR5A2 CREM ZMYM6 PTPRC CUL4A THOP1 SPATA5 KIF2C ARIH1 XPO1 TNFSF10 MIS18BP1 HNRNPU-AS1 C8orf85 KRTAP6-3 SARDH HSPB2 DDX3X GALNT3 COIL RAG2 CLIC4
RAPA_EARLY_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RAPA_EARLY_UP.V1_DN GPT KRT17 PSMA7 DUSP2 SLC22A14 GALNS GBF1 PPAP2B TRPM2 STK11 NCF1 IL12RB1 VENTXP7 MUC3A EPHB4 SYNGR4 COL9A1 ZNRF4 SEC16A YIPF2 FARP2 BRMS1 MTMR2 CBX4 NUP210 MICU1 COG5 MID1 CAV3 AXL BBC3 RBMS1 MOG FOXI1 ATG2A MGST2 CRIP2 CRMP1 FAM168A NUMA1 DPH1 GNAT1 GRN PLEKHO2 CYP2A7 TACR1 SF3A2 LHB CRY2 KDM4B SMAD9 ACTR1B SNAPC4 FXYD1 C10orf137 ENG F10 ITPKC NR2F1 TRIM22 GPR12 MAP1A TNN INPP5J COL10A1 TAF4 MSMO1 SLC9A3R1 CDH22 ROR2 LGALS3BP IGFBP3 TH IFI27 SPRR1B CYP2F1 FLT3LG PCBP4 CHKB FLOT1 GFRA2 NUPL2 GLUL ALDH1B1 PSMD13 GABRB1 GRM1 PPY PNPLA4 HAAO OVOL1 ARHGAP4 GNRH2 DDN MFSD7 ZBTB6 WFS1 ZNF175 PHYHIP NFE2L1 SNTA1 RAB5B SELPLG PRELP ZNF3 EMR1 BCAT2 RNF167 MARK2 WNK1 LMNA CDH12 CCDC85B MEP1A HLCS TROAP APBA3 SCO2 FAM182B HIST2H4A FAM49A ACY1 ESRRA SNTB1 PAX2 EIF4EBP1 PLIN3 GRM2 YTHDF3 SERBP1 NHLH1 AOC3 PTGS1 CACNB4 GALR3 SMAP1 ADH6 BCKDK MYCN LTB OSBPL2 LRIG1 KCNQ1 WDTC1 CIB2 FRAT2 PISD PRKCE PCSK2 MINK1 HSPA1A SF3B1 NAGPA EDDM3A TSPAN4 PLXND1 SOX10 COBLL1 OR2J2 GUCA2B NCAPH THOC1 IL11RA GRIN1 PINK1 KDM4A COL9A2 ACHE MTMR3 PDZK1IP1 PRH2 ABTB2 TFAP2A DUSP14 MET ASMTL GDPD5 KISS1 CHMP3 FTO PTCH1 DSG1 ZNF799 HDAC6 HLA-E XRCC1 SOS1 KRT4 CIT PSD CNKSR2
RAPA_EARLY_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RAPA_EARLY_UP.V1_UP AVPR2 PIGO C1orf95 NUDCD3 GRIN2C EFNA5 ESRRB CCDC88C TICAM1 FGFR2 PTGIR ALOX15 MPO P2RX7 PPIP5K1 TGM4 CDC42EP2 TIMP2 GRK1 CDH4 SLC25A42 FOXJ1 KCNC4 FPGS CTSD SSH1 HBP1 C11orf9 FLJ39739 TCP10 CASK MATN1 CDK10 GABRB2 HERC3 ATF6 GAS8 ISG20L2 B3GNT6 PHKA1 KRT14 PTGDR TCTA SCN2B SST KSR1 CEBPA AMOT NR2F6 HAB1 HOXD10 VTN PARM1 C3orf32 ANPEP KRT13 KRT19 ASPH HMBS IRF7 CCDC9 SLIT1 PTK6 PROP1 FSCN1 CACNA1C KIAA0040 TLE3 GMDS VSIG4 NCOA1 AEBP1 PLA2G5 CD97 TAGLN3 ASTN2 GALNTL4 SHC3 KLHL35 DNAH3 MAN1A2 LDOC1 INS ATP2C2 LHX2 PDE1B LOC100287723 LST1 KLK6 ANK1 CDON HIVEP1 SYNPO GRPR SLC22A18AS SFPQ DRD3 VPS11 CHD5 GML DAGLA FABP7 BAI2 SNCG ABCC8 CHRD GNG12 NPY CBX5 CLDN14 COL5A2 PDE2A C2orf72 GPR31 OLFML2A ADRA1B PART1 MLL HLA-DRB6 GAPDHS FAM50A BASP1 PLEKHA6 TMSB4Y MPPED1 GREB1 NKX2-8 ITGAE COL6A1 COPG2 NAT9 HSPB6 PRKCG GPR182 GNAT1 ATG13 ICOS SOCS1 CES1 MXRA7 CYP4A11 ASMT DLX5 PIP5K1B PTPRD TNFAIP2 ITPKA BAP1 PDE5A PRG2 NDST2 PTH2R TRIM38 CLCC1 NINJ1 SEPT11 ITGA5 NUCB1 FRAT2 FKBP1A ETV2 PET112 NRL CTSF FZD9 PDE4A CTBP2 CLK1 PAQR4 L1CAM ACOX3 ST8SIA3 VGF PPP3CA ARHGEF15 RAD9A HPGD USP9Y HCRTR2 DKFZP586I1420 CYP11B1 ADCY10 CCNG2
HINATA_NFKB_IMMU_INF http://www.broadinstitute.org/gsea/msigdb/cards/HINATA_NFKB_IMMU_INF ICAM1 TNFAIP2 CCL2 PTX3 CCL20 RELA IL8 IRF1 OLR1 CXCL6 IL6 CXCL2 CD83 CXCL3 IL1B NFKB1 NFKBIA
HINATA_NFKB_MATRIX http://www.broadinstitute.org/gsea/msigdb/cards/HINATA_NFKB_MATRIX ARHGDIA CD9 SERPINB2 RND3 KRT7 MMP14 RAC1 MMP1 FN1 SERPINE1
CYCLIN_D1_KE_.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CYCLIN_D1_KE_.V1_DN NOS1 KIF1A TESK1 MATK PVALB BAG1 TXLNA FXR2 YLPM1 RNASE6 TFCP2 NKX3-1 PRKCQ PIK3R1 UBE3A XGPY2 ATF7 IFIT3 CYP2F1 PDYN PTH1R GNAZ ALDH1A1 CFTR SLC25A11 KLF9 CXCL12 MYL5 RXRG SERPINA7 CSF2 TNNT3 TGM3 KIAA0141 RLBP1 PSG3 IL17A DPF1 TOB2 DNM1L AMHR2 CAMK4 COG2 PBX2 MPI CAPG ZNF35 KRT17 DRD4 MS4A1 GYPA WTAP ADARB1 TAZ UCP2 ARNT PPIG KRT5 PSME4 INHBB ERBB2 VAMP2 NEDD4 LIMS1 ILF3 ACTC1 KRT13 PDE6H MAPK4 NTF4 KIAA0040 SMCP PLCG2 CAV1 PNLIPRP1 PTCRA GRIA1 PENK CPN1 LILRB4 NPAS1 PIP4K2B IFNAR1 EYA1 ACTN2 RIT2 MYO1F CHD8 NCKAP1L ROS1 UNG VCAM1 PEPD NTSR1 PDCD2 GPSM3 ADH1B CRMP1 DSG1 LOC644099 MXI1 RRP1B FKBP3 NELL1 NR6A1 CYP24A1 HRG DNAJB4 POU3F1 C10orf116 PCP4 GJA1 IL7R CXCL3 FES GATA1 TUBA4A CATR1 FBP2 CHRNB2 SPTLC2 GRIN2B RAPGEF5 SALL2 ALPL MAG F3 ADD3 ATP2B3 HPN ALPPL2 SOX3 C1QB GYPC TCIRG1 C4orf6 ATF2 ZNF132 FLT1 IFNA10 BET1 CXCR7 HPX COL3A1 CPA3 GART TCEA2 PROC MYH2 MX1 KCNJ8 BNIP2 EML1 FCER2 IL1R1 SPIB CNGB1 NNT POU2F2 DIO2 DNAH3 GAB1 PAFAH1B3 ALK GALT TMSB15A OXT DAZL ANGPT1 CD37 AKAP6 PCK1 ARL4A PGM5 TUBA1A PIP4K2A CD53 CD27 C15orf31 EPHA1 CFB TARBP2 PRKG2 MC1R LRMP A2M DAO ABO KLK3 ATP6V1B1 RAB5B CRISP2 CD14 CYP2C9
CYCLIN_D1_KE_.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CYCLIN_D1_KE_.V1_UP KLK6 COX17 DMWD LTBR PKD1 SNRPC AXIN1 ZYX PLOD1 DNASE2 CCL23 LOR PPIB HSD17B10 HSPG2 EIF5A MUC5AC EPHA2 AGXT HTR6 KAT5 MALL FHL2 PFKL ID1 SNX17 RRAS KLF4 POLD1 CEBPD HSF4 PPM1F RASSF7 KDM5C KIF22 PTS ADRA2B REN LCN2 SUPT5H FZD5 PPID IFITM1 SMTN BCL9 BATF GLI1 CRIP1 FOXK2 EGR3 MARK3 GCHFR SLC6A3 CDK6 KCNAB2 EVX1 CELA2B SLC35D1 S100A2 CDR2L ASNS GPT KIFC1 PRRC2A TGFBR2 DUSP5 CCKAR HSPA1B MAT1A HBA2 SLN PLK3 CGREF1 CD52 INTS9 NRG1 TRAF1 PTPRH KCTD2 GLB1 COL18A1 FAM189A2 TSC2 NFE2 FGFR4 GOT1 MPHOSPH6 ALDH3A2 CHKA SCAP CARS LMF2 ABLIM1 NEK3 APOC4 APOA2 PPP5C REEP5 DAP ST3GAL4 MAN2A2 PHF20 DYRK4 RAB31 CTBP1 ATXN1 CDKN2A E2F4 KLC1 PKN1 ARCN1 SNRPB2 FSHR CA4 GGT5 PCGF2 GP2 DCAF7 HGFAC ADRA2A psiTPTE22 APOC1 COL5A2 MMP15 COASY IFRD2 STT3A THOP1 MAD1L1 TNNT2 MED24 ETS2 FOSL2 SKIV2L2 CDKN1A PIGC THBD HSPH1 CENPB CHRNB4 STAM INPP5A CASP3 THY1 COX7A1 LPIN2 MASP1 TCF12 SLC38A3 HOXC5 DTNA PLCB2 PHKG2 CCL20 PTPN3 CHRNA5 TROAP RGS3 DUSP4 PPP3CB BIRC2 RHO ZIC1 HK3 RUNX1 LOC650946 TFAP2A DGKD ZNF787 CDS1 THOC1 PDE4C MGAT5 BRF1 AHR NPR2 DRD5 POLR2C ARL3 NTN3 GNAI2 CYP2E1 PRPH CDR2 PMPCA FAM3C TTLL12 TRIM25 DNASE1 TRIO
CYCLIN_D1_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CYCLIN_D1_UP.V1_DN TOB2 HDAC2 EIF4G1 ALPPL2 CAV1 LMAN2 SPIB BTG1 TFCP2 NTF4 VASP PVALB PIK3R1 PDCD2 TXLNA KRT17 SMPD1 FLOT2 SART3 COG2 RXRG PEPD CCNG2 ANK3 GNAZ UMPS EML1 SYPL1 PDYN FXR2 KIAA0141 KIR2DL4 WTAP ERCC4 PLA2G2A PBX2 CD19 HLA-DRA AP3B1 KIF1A EPHA1 HTR1A GATA1 CHRM1 KLF9 WWOX NCKAP1L ITGB6 GYS1 USP9X CAPG ROS1 BRCA2 MYH2 ACAA1 CUL7 ARNT BAG1 ZNF133 PRKCQ ILF3 IGF1 ACAA2 SNAPC1 G6PC CAMK4 AMHR2 POU3F1 GALK1 TIA1 BTN2A1 TNNT3 MLC1 TARBP2 SYT1 PSEN2 ATF2 RYK MAPK8IP2 ATF7 TRH PPARA CSF2 SPTLC2 HERC1 YLPM1 RAB9A MT1F CHRNG CLP1 MATK CXCR4 NOS1 MYL5 SSTR1 LILRB4 RGS16 ASGR2 HPS1 INHBA S100G GAL DTX2P1-UPK3BP1-PMS2P11 HRG RNASE6 PAFAH1B3 TUBA4A AMBP GPR1 NNT DAZL TPM3 CASP2 BRAF ERG SCAF11 MYO1C MPI ALOX5 CBLN1 RLBP1 PCK1 NTHL1 TPM2 ITGA3 SPINK1 PTPN4 IL7R VAMP2 ATP6V1A TTC35 PPIG SLC6A4 AKAP6 GCK ATR IL17A CPA3 TPD52 HRH1 KIAA0040 WDR67 PARG MRE11A CDKL5 MYO1F GAB1 IFNGR2 NEDD4 HPCA S100A4 NR6A1 SPRR2C DNAJB4 CG030 RRS1 CYP24A1 LAMB1 SPHAR ACVR1 CCL11 BBC3 IL1A GNS RNASE4 ZNF266 AGER CXCR7 EZH2 NKX2-5 UNG MYL9 MFAP3 RAB9BP1 GUCY2C ZNF35 CCR9 KCNJ3 SULT2B1 CASP9 NELL1 RBMS2 PBXIP1 ASNA1 KRT5 UCP2 CFB PAFAH1B2 GUCY1A2 PUM2 GATA4
CYCLIN_D1_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CYCLIN_D1_UP.V1_UP SNRPC COX17 PKD1 MAD1L1 PLK3 PPIB CXCR3 PTMS ZYX WNT1 APOC4 EPHA2 CENPB CD52 AXIN1 SLC19A1 MUC5AC RRAS DMWD SLN ID1 KLK6 CCL23 HSPG2 PTPN3 PPP5C IFITM1 BCL9 FDXR FGD1 RPS6KA1 KIF22 GPT ANPEP MMP15 CCKAR PCSK7 SYN1 SCAP RCVRN ABCA2 TRPC3 ABLIM1 CGREF1 MC2R RXRA DVL1 PRRC2A GP2 EIF5A SPOCK2 RHO SUPT5H THY1 MARK3 SLC6A3 SLC18A3 CTF1 CASP3 CA9 FOXO4 SELPLG TRAF1 DYRK4 PDE1B HNRNPA3P1 CEBPD PCGF2 PTS CA4 BLM KIAA0090 TTLL12 TK2 DNASE2 FZD5 GTF2H4 KLF4 LTBR TAP1 ST3GAL4 ALDH3A2 MLL MNX1 S100B TGFB1 EVX1 ATP4A PLOD1 KSR1 HSD17B10 STAT5A BMP5 MYL6 NAT6 APOA1 TRIM25 RASSF7 MASP1 CCIN PAX2 GCHFR GUCA2B MED12 NCSTN MSN SMTN PPY FSHR HIST1H3B ADRA2B DRD5 NKG7 HOXC5 FHL2 SMOX MALL HTR6 NFE2 INTS9 RAB31 TAGLN PCDHGA12 WT1-AS GOT1 FAM189A2 GNL1 HK3 KIR2DL3 SGCA PDE2A ETV4 CD1A WNT10B ADRA2A OPRD1 C11orf41 BATF KCNAB2 BIN1 ETS2 RGR D4S234E SLC12A4 HOXB13 SHC3 MGAT5 DCAF7 MAT1A MKI67 EGR1 FCGBP TFPI2 DEFB1 SLC6A9 HSPA1B CYP2A7 COL4A2 MYT1 HBA2 GLB1 HAGH GGT5 NEK3 RABEPK CHGA CPT2 TSC2 RASGRF1 THBD BMP1 PTPN21 CETP RXRB GADD45A ARCN1 ITGB1BP1 CHRNA5 SERPINB10 UBXN1 NDUFB7 KDM5C CACNG1 GALNS REEP5 MSLN HNRNPA0 HRC
CSR_EARLY_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CSR_EARLY_UP.V1_DN PDE5A LOC678655 ALDH1L2 MAB21L1 LRIG3 GDF5 ZNF302 ELMOD3 SULF1 ADAMTSL4 DDX17 LRIG2 DHRS3 ALDH1A1 LDB1 CDKN1B CIRBP LOC100132292 ACCS SKP2 KBTBD6 ARL4D ATP11A USP33 PEX6 DAAM2 SAG SLC25A46 FZD2 FUS ADM NPHP3 NYNRIN SLC9A7 SPG11 ING4 ZNF226 LOC100527964 HBP1 NDNF COL1A1 DOM3Z PAN2 ANKRD33B TXNIP STX16 HEBP2 AMT ERMAP ELMOD2 CYP2R1 ZNF585B ANKZF1 C3orf23 LRRK2 ARRDC4 IP6K2 TDRD6 CKB HOXA10 NR1H3 FUT10 PPIEL C17orf103 FLJ39051 RBFOX2 PRRT2 AKIP1 PAPLN LOC653602 ARRDC3 ZNF337 ZNF37BP STAT2 ZNF467 GFRA1 SIX1 ABCC10 SNPH UBN2 APBB3 C14orf132 TRIM69 FBXO38 SDPR BBC3 CROCCP2 BRD8 ZFYVE1 LTN1 ZFP64 FBN1 POLL GLG1 NBPF3 STC2 CC2D1A SEPX1 LOC100132062 GSDMB TNFSF13 RAPGEF3 PRSS12 ACYP1 HSPG2 TRIM56 C9orf150 RABGAP1 PMS2P1 KIAA0319L ZNF500 OTUD1 FAM46C YEATS2 AP4S1 UFSP2 FAM63A PLCD1 DCP1B IFIT2 KIAA0528 GTPBP8 KIAA1147 NMT2 ROBO1 SLC16A7 ACBD4 YPEL2 RNF20 WEE1 TFAP2A ERAP2 SLC7A14 EIF4EBP3 ASPA PHIP CDRT4 ALDH3B2 STOX1 FBXO25 TAF15 INCA1 NSUN5P2 MRI1 ATF7IP MPPE1 FLJ45340 ZNF33A MOSPD2 XAF1 IGLL1 C2orf56 GRHL1 SIX5
CSR_EARLY_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CSR_EARLY_UP.V1_UP SMAD7 HBEGF FOXD1 GATA2 BCAR3 SPRY4 ID3 MAP2K3 NRIP1 UGDH NOP16 TOP1 SMTN STC1 FRMD6 ITPRIPL2 FZD8 EHD4 TXNDC12 DDX21 LRRC8A ZBTB2 ZBTB12 PHLPP2 EIF4A3 DNAJA1 RNPS1 MKI67IP ELL TMEM200A CBFB REST SLC30A1 FJX1 PHLDB1 FAM107B PTPN12 MAPRE1 GNL2 PPIF GTPBP4 CRISPLD2 KPNA4 PLAUR SNAI1 REPS2 TRNP1 HLX BCAR1 FAM180A YOD1 MESDC1 DIS3 SRSF3 CD274 UBE2N TCEB1 CCDC59 ST3GAL1 SMARCA4 ETS1 PTPN1 KLF10 IL11 PCSK7 C21orf91 NIP7 DKC1 C9orf30 DLX2 GABPB2 DNTTIP2 TIMM22 C6orf228 SEC24A BRPF1 CD33 PAPD4 RG9MTD1 EIF4H KLF13 CHUK ZNF324 PAPD7 B3GNT6 BDKRB1 TBX2 PANX1 POM121 RIPK2 NCL NMD3 PLCH1 ZPBP TFG NET1 USP12 UTP3 ADRM1 SLC16A1 MOB1B KIAA0020 ELK3 C8orf76 DSP PHF20L1 DCBLD1 C12orf44 SPRY2 PXN PTGS2 SLC28A1 ILF2 D4S234E AMMECR1L NT5E SRP72 UFM1 HPCAL1 DDIT4L MNAT1 SOX9 PTP4A1 HMGA1 CTPS TDG VTA1 F3 ZNF800 NUP54 POLE3 DHX33 TMEM2 RGMB HECTD2 TNFRSF12A UAP1 CSRNP2 YWHAG EIF4A1 SCHIP1 SREK1IP1 PDE4DIP MYO9B RFK INHBA ZNF697 TIMM23 GAL TCEB3 RRP9 IRAK1 AMD1 NRBF2 TMEM93 SLC37A4 DOT1L SHB PRKRIR ACTR3 PNP MRPS35 USP36 VGLL4
CSR_LATE_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CSR_LATE_UP.V1_DN MSMO1 INSIG1 DENND2A SCD HHEX MVD TNXB LPIN1 SVEP1 IGDCC4 PRSS12 STARD4 FADS1 CHL1 TMEM119 MAMDC2 SC5DL HMGCS1 DHCR7 HMGCR FAM131C LSS ASS1 MME KIT GYPC MAMLD1 RARRES3 RCAN2 FADS2 ANGPTL2 LOC100507632 QPRT TM7SF2 ALPI DRAM1 KIAA1598 GSN SLC22A18 CLEC3B FGGY IRS2 CFH BAI2 ACVRL1 PYROXD2 NTN4 LOC100289610 C10orf54 TP53INP1 EXOC6 NYNRIN L1CAM UBE2L6 TRIM22 GFRA1 ACCS ELOVL6 ROBO3 IDI1 BACH1 EBP SGIP1 CCL11 FDPS PAMR1 C14orf1 SCML1 DDB2 C2orf27A DPP4 OAF VAMP5 BTBD19 ERMP1 BTG2 BCL10 LDLR EPHB6 DDX60L P2RX4 SOD2 CDC42EP2 CALD1 PLCD1 ANKRD33B CCL2 IL1B PRKG1 SLC25A1 KIAA1147 PLBD2 FDFT1 DYRK1B FIBIN TBC1D2B LRIG1 ADORA2B CCRL1 MXD4 PRKCI DKK2 MAN1A1 C1orf115 ECH1 LOC100287704 TSPAN9 CDS2 MRGPRF ABCA6 PRRT2 EPB41L4A-AS1 SFTPB TSKU SNX18 TCEAL7 C11orf10 C10orf58 LOC653602 PLEKHG4 C1orf52 LONRF1 SAMD5 GAS1 GJD3 ADAM17 CTSF GAS6 SUMF1 SNTB1 EPSTI1 RASSF2 GLT8D2 ANKRD29 POR MOB3C COL8A2 LPAR3 F8 DYNC2LI1 TRERF1 APOL3 FDXR NOV IGBP1 NFKBIE DUSP4 PGF TSC22D3 DAAM2 MLLT6 KIAA0930 LOC678655 NBEA LOC100128178 SDPR PDP1 C6orf1 OLFML2A TOX KLHL29 FTH1 XAF1 ITGB8 CMBL GLI3 PDE5A RNLS CHST2 ME1
CSR_LATE_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CSR_LATE_UP.V1_UP TCF19 CXCL12 FEN1 GINS3 ZWILCH MT1H MT2A UHRF1 GMNN TRIP13 MCM3 GINS2 SERPINB7 HAT1 MZT1 MT1B TRNP1 S1PR1 VEGFC CRISPLD2 PSMD2 MT1X STRA13 PA2G4 MT1G FANCA PAICS BIRC5 TIMP1 SAMD11 POLR3K ITGA6 IGFBP3 FABP5 TIMP3 FARSB SHCBP1 IL7R EXOSC9 TOMM34 MT1L TUBA3C PDLIM5 TMEM130 TRPC3 NUP88 EML1 PRIM1 TUBG1 MMP3 KRT25 DCTPP1 ARHGEF1 HN1 CTPS MRAS CDCA8 ASB6 CASP2 KRT18 DRAP1 CHEK2 MYBL2 TUBA4A PDCL3 FAM83D ANKRD32 TMEM48 SMS BEX1 AHSA1 CCT6P3 HIP1 MAZ KCNC4 PREB D4S234E CDC6 FOXM1 COPS3 NOC2L CXCL6 PGM2 TRPC4 EEF1E1 TAGLN3 GREM2 HMGB1 SNORD22 UMPS CDK5 SRM C16orf61 ALKBH7 POLD1 AP1S2 SLC16A3 NUF2 LTBP2 FKBP1A TPM2 C19orf48 TCEB1 MAPRE1 NUDC SLC25A11 RRM2 RAD18 LYAR CCND3 NKX2-1 POLE3 SLC16A5 DIAPH3 YIPF3 MBL2 ILF2 PRMT5 MT1F C13orf27 NMB ZWINT LMNB2 CLSPN CCDC34 EIF5A GYS1 HAUS2 IMP4 MYH1 EIF3B MTHFD1 RPF2 CYP4B1 ACTL6A CBFB DNAJB11 KIF22 FARSA KIAA1279 ANLN UBE2C YEATS4 PARP11 PPP5C HERC4 EZH2 UTP18 NUDCD1 SNRPA1 KATNAL1 ZNF367 CDC7 DTYMK ST3GAL4 NETO2 CDK1 TSPAN13 WSB2 CDH2 C15orf63 C12orf24 PBK DCBLD1 GTF3C6 PSMC3 KISS1 CIAPIN1 CKAP2 MET SSTR1 PSMD14
AKT_UP_MTOR_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/AKT_UP_MTOR_DN.V1_DN KCNN4 GNMT ASS1 IBSP SLC7A5 KCNK3 PKP1 SLC22A12 CD248 AQP5 MTHFD1 CAV2 IL17RC STEAP1 SLCO3A1 ANGPTL4 CHN2 FAM20C RPS6KB2 MSL2 PDIA5 NR4A3 BEX4 PROM1 SASH1 ADHFE1 GATAD2B FMO3 BCS1L KCTD12 MAZ ISYNA1 CHAD FXYD1 SERPINF2 KRT6B ESR2 TYW1 MSRB2 GPR83 SMARCD3 PI16 IL13RA1 EFEMP1 DNAJA3 RAMP1 IFRD2 BLVRB SLC18A1 FAM134C TMEM97 PUS7 FKBP11 EIF4E3 TPH1 RTKN PNLIPRP1 TSPYL4 GALNTL1 MLPH RGS19 ITLN1 PLA2G4A C1orf130 AP2B1 VPS33B IRS1 POLI LIMD1 GSPT2 ERF MEPE CAP2 BDH1 SH3BGR CDC42BPA ITGA6 RTN1 ACY1 SPATA5 AMPD2 ZNF771 MERTK MRPS6 TULP3 HAUS1 CENPQ KRBA1 TYMP GSDMA POLD2 CHST12 NDRG4 ITSN1 TP53I13 CDH16 SLC37A4 LRRC1 CHRDL1 RNF25 TM4SF1 ADORA1 C1R GNAT2 LANCL2 FAS ITPKB TIPIN LPL ASF1A TNFRSF19 AGPAT5 ABHD14A POLM DPT MGAT4B PDZRN3 PPP1R3C KCNAB3 S1PR3 NAT8 FBN1 STAB1 MCM6 SFRP5 FKBP10 IL7 HIC1 FEZ2 HARS2 UTP20 VCAN GNA14 PARP2 MMAA FRAT2 SARS2 MYB COL5A2 PHLDA2 NID1 CD200 CPLX2 COL17A1 CBS MLXIPL SNHG6 C22orf40 OGN MOCOS DPYD SHMT1 PLEK2 CAMKK2 JPH3 GSTA4 C7orf55 CBY1 WEE1 MSX1 CADM3 ZC3HC1 PHGR1 TACR3 CELA1 COIL MYO1G ZFP112 GAS1 BMP7 PPAP2B KLF1 GNG11 HPGD PSAT1 TSPAN4 SATB1 PRKRIP1 TNNC2 PMPCB TBCE METTL5 C11orf71
AKT_UP_MTOR_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/AKT_UP_MTOR_DN.V1_UP SAA1 PRSS37 ARG1 PSCA GSDMC SAA2 ANGPTL1 SYT17 NFIL3 SFTPD PARM1 IL8 GDE1 PLK2 SNHG11 TESC CRLF1 TMEM40 KCNK5 DHCR24 ANXA13 GDPD2 VAMP5 MAN2B2 CDKN2B KCNQ1 TNFRSF12A HIST1H4H DUSP1 METRNL FAM129A CIR1 IL1R1 CD55 FLT1 FXR2 SPHK1 TACSTD2 CXCL1 GPR56 C1orf9 TMPRSS4 ADAM10 WFDC12 PDK3 CXCL16 KCNH3 CTNS AK4 SLC44A1 ATF3 PLAT FBXO6 KRT23 PLAGL1 ST6GALNAC6 GPD2 PYGL TMEM56 HIF3A GPX8 CLMN SLC6A6 GCH1 CPE SPEER4F SPRR2A LRG1 BACE2 KLF6 MAL2 C3orf52 SGPL1 GGA1 ABCA7 IFIT1 LGMN NOL12 MYO5B PAK1 CALCB HCK MPP2 RAB3IP RASSF1 DUSP8 PACSIN3 MYCN RIMKLB SYT8 EDN1 PLSCR1 TJP3 SEC14L2 HOXB5 SOCS6 C6orf106 RUNDC3A CPNE6 PFDN2 HIST1H4I SPINK4 VANGL2 JUNB S100A8 DUSP10 SH3BGRL2 PON1 HOXB3 CXCL5 DHCR7 ZNF746 DAZL GAK HIC2 VAT1 GIPC1 ARRDC4 GLDC SUSD4 FKBP8 BSND NEU1 PTPRJ EFNB2 HLA-DQB1 LYPD1 MLLT1 LAMC2 KLF10 A4GALT ALDOC TOR3A RNF19B TPRN MICU1 PDZD11 C9orf89 TMCC3 HBEGF PON2 MSR1 MPZL2 ING2 CEACAM21 LSS APOC2 FBXL15 BCAS2 RNF41 RASAL3 CAMKK1 GPR44 TPD52L3 ADORA2B NFKB2 C3orf37 MVP IGF1R RASD1 NIN PSMD7 PPP1R3F TTLL1 TMEM186 KCTD9 BMP8B AKAP2 HCN2 ZNF295 CCL6 C4orf49 GUSB FXYD4 DSCAM VILL PDE10A SLC39A8 DAGLB RBM4 UBE2R2 TRAF3 TGIF1 ELL
AKT_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/AKT_UP.V1_DN KCNK3 GNMT IBSP AQP5 SLC7A5 PDIA5 KCNN4 ASS1 CD248 SLCO3A1 SMARCD3 SASH1 PROM1 PPP1R3C PI16 FXYD1 FAM20C PKP1 SH3BGR TNNC2 IL17RC RPS6KB2 SLC22A12 TSPAN4 CDC42BPA EFEMP1 CHST12 CAV2 C1R C7orf73 HTRA1 FMO3 SLIT3 S1PR3 CXCR7 MMAA KCTD12 KRT15 RAMP1 GATAD2B MSL2 NID1 SLC18A1 ADHFE1 ZNF213 ITIH5 RXRB POLI EFEMP2 MEPE SULT1E1 ESR2 GSTA4 MSRB2 PNLIPRP1 CHN2 NR4A3 ITPKB DPT SCARA3 SERPINF2 BCS1L SATB1 TENC1 MERTK FAH FBXO32 AMPD2 NR1D1 C22orf40 ZNF771 CSDC2 PADI3 PDZRN3 TSPYL4 ANGPTL4 PLEK2 COL17A1 IRS1 KRT5 UPB1 CHAD C1S BLVRB PLA2G4A GALNTL1 CNN2 PTGIS NAT8 MRPS6 PDE9A IRS2 EIF4E3 RTKN LIMD1 SCARA5 BEX4 RCE1 PUS7 HEBP1 SIX5 OGN C11orf71 LPHN1 MATN2 ZNF187 ZFYVE21 TNFRSF19 FHOD3 HIC1 SIRT3 TYW1 FAM115C CDH16 GNA14 ZNF385A RMND1 RECK SFRP2 TCF21 SLC37A4 FKBP11 ISLR SCCPDH STAT5A LTC4S ID3 HPS1 WIF1 GAS1 MYOC ASF1A HMGCS2 SYPL2 PPAP2B DNAJA3 MOCOS CBS PDLIM3 TIMP3 FANK1 ZEB1 POLD2 FMO2 IFRD2 ZC3H12C IFFO1 VSIG2 ZDHHC6 TP53I13 KLF2 G6PC2 SNHG6 DRAM1 FUT10 NT5DC3 TCF3 RNF25 EXOSC1 FAS RPAP3 CELA1 PM20D1 PLTP IL13RA1 PDE4B CAP2 ALPL PAQR7 TULP3 SLC39A4 NCAM1 GHR RORC PHF1 EDARADD GSPT2 PDLIM4 AXIN2 FUT8 ITGBL1 LPL BTBD2 TPD52L1 SLC39A13 GRAMD1A PDGFRA
AKT_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/AKT_UP.V1_UP SAA1 PRSS37 ARG1 GSDMC PSCA TNFRSF12A DHCR24 TESC TMEM40 SAA2 AK4 ANGPTL1 CDKN2B PLK2 IL8 SFTPD SPHK1 TMPRSS4 PARM1 ATF3 ALDOC CD55 GDE1 ANXA13 PYGL KCNK5 HIST1H4H PLAT METRNL DHCR7 SYT17 PDK3 GCH1 IFIT1 FAM129A MSMO1 CRLF1 GPD2 FAM3B KRT23 ADAM10 TACSTD2 SPRR2A SPRR1A KCNE3 LGMN PFKP ADORA2B PTPN14 FLT1 C1orf9 CLMN GPX2 C4orf49 SLC6A6 HIF3A PLAGL1 IFIT2 S100A14 NKAIN1 WFDC12 C3orf52 NFIL3 MAL2 RASSF1 LSS FBXO6 VAMP5 MAN2B2 PLSCR1 CXCL16 BACE2 HCK TMCC3 GDPD2 FABP5 CYP51A1 CALCB GPR56 SYT8 PRKCH COMTD1 ABCA7 GUSB SH3BGRL2 SLC2A1 GPX8 TMEM56 MYO5B SLC6A14 UGT8 CTRB1 SEPT9 HIST1H4I CIR1 SECTM1 TPRN ADH4 IL1R1 HOXB9 PAK1 MICU1 SGSM3 SEC14L2 VAT1 RIMKLB HIST1H2BD DUSP10 TOR3A IDI1 RIPK3 MFSD4 GIPC1 EDN1 GOT1 ST6GALNAC6 VILL KCNQ1 SAA4 ROPN1L HIC2 FXR2 SOCS6 TJP3 DNAJB13 PDGFD PACSIN3 PPP1R3F SPECC1 LDLR AKAP2 SGPL1 TRAF4 KLF6 UNC5B SNHG11 NEU1 POLE3 TOM1L1 CAMKK1 LRG1 RUNDC3A SPEER4F LDHC ERO1L P2RX5 IFIT3 TFRC MPZL2 PDZD11 GAK INSIG2 PDK1 BPGM PON2 CCNG2 BID UBE2C GTF2IRD1 DLG4 RHOV PREP PTPRJ IL1F10 TPD52L3 PTRH1 ACOT9 C9orf89 ASB11 HN1 MMP15 FDFT1
MTOR_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/MTOR_UP.V1_DN KCNK3 C7orf73 NCAM1 SIX5 SLC6A20 ZNF746 GRAMD1A FBXO32 SNHG11 WIF1 CXCR7 HSPA1A PPP1R3C NR1D1 PHF1 TNNC2 VSIG2 KLF2 OLFML3 KIAA1274 TENC1 PPP1R14A WBSCR27 CPE NFXL1 DDIT3 UBXN2A TSPAN4 KCNH3 TNIP2 PDE4B IRS2 NGFR NFIL3 KRT15 PDLIM3 SMARCD3 XDH ADCK3 CCT6B WFDC1 ZNF213 HSD17B1 DUSP1 CSDC2 KCNC1 ISL1 CIRBP KRT5 NCF4 CLPX CXCL1 TBC1D17 AOC3 HTRA1 DTX2 ID2 MOXD1 ITIH5 SULT1E1 SLIT3 FAH PDE10A SH3BGR TMEM186 TREM2 SERPIND1 AQP5 FANK1 H1FX MFAP2 PRDM4 DNASE2 ARTN RASD1 GCOM1 EXOSC1 TGIF2 PDGFA RFTN2 OSMR TCF3 IFITM1 MYC CLEC4M PHIP C10orf137 PHC1 KAT6B EFEMP2 SCARA3 BACE1 STX1A PTPRS MYH11 PI16 PDIA5 PDE9A HOXB5 SLC25A28 FZD9 DPEP1 ICOSLG OSGIN1 CES3 C1R UBR3 PLTP ZMYM5 FN3K QPRT PDE6H UGGT1 THBS3 DNMBP KCNQ1 CHRD GEMIN2 CTNS MESP2 MMAA UPB1 RCE1 IFT172 MLLT1 CSGALNACT2 SLC44A1 IGF1 MYOC SYF2 CHST12 WDTC1 UNC119 CSRP2 DENND1A S1PR3 LTBP1 CDC42BPA BBS2 MIF4GD RBP1 TH SASH1 CCDC134 SLC39A13 SH2D1B NR1D2 SYN2 RNF41 C2 ABCA1 CSAD PTGIS COL11A2 B3GALNT2 MED12L PDE6G CRY2 NTHL1 PTGER4 SLC33A1 FXYD1 L2HGDH HIGD1C ADAMTS8 SLC2A4 MAX C1QTNF4 GDPD2 NELL2 SLC12A4 PLEKHA5 ARL4D SULT2B1 PHAX HYAL3 RRM2B HLA-DQB1 LEPREL4 LIFR PRSS23 CLCA3P MYCN COL20A1
MTOR_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/MTOR_UP.V1_UP FABP5 MSMO1 CYP51A1 TNFRSF12A FAM3B IDI1 LDLR TFRC PSAT1 CDK1 FOXI1 PFKP MCM6 ALDOC AK4 BST2 PCYT2 GPX2 RRM2 FGFBP1 SPRR1A PAFAH2 DHCR24 FDPS LGALS3 OAS2 HMGCS1 DLG4 SIGLEC1 LTV1 LOC646627 CDC20 DHCR7 PREP MYO7B IFIT2 SLC2A1 PTPN14 ABCA2 PPAN S100A14 GSDMA SQLE DUOXA1 MTHFD1 IDH3A STEAP1 MS4A7 IFI35 EEF1E1 HIVEP3 UBE2C ZNF518B PDK1 TG KCNE3 APOOL TESC NKAIN1 RCOR2 LIPG C9 BACH2 COMTD1 ELF5 LDHC TMEM97 IL27RA SEPT9 CDH17 IGLL1 CYP26A1 UHRF1 HELLS PRKCA RD3 MKL2 PYGL HSPE1 HIST1H2BD USP18 MCM5 MSX2 SERPINB5 TMEM53 A2LD1 MAK KCNK4 SC5DL NTSR1 STARD4 NSDHL CPPED1 ATF3 HN1 INTS3 GSDMC DBF4 BID IFIT1 HSD17B13 C4orf49 ADORA2B DFNA5 ERN1 SELRC1 H6PD TARS2 CTRB1 KIAA1967 CCL5 TIPIN TRMT5 IFI30 GCH1 OBFC2A NQO2 COQ4 HMOX1 HTT TPH1 KIF9 ATXN7L1 FNDC7 IL18RAP SP100 CMA1 PCDHB5 SERPINA3 PCNA TMEM106A BDH1 TCF19 GABRG2 FAM134C ADRA2B CAPN12 NEIL3 RANBP9 ADRA1B ANKRD33 ASB11 MINA PRAF2 FAM131A ISYNA1 SLC22A7 FTMT BLK VIP CMBL SMTNL1 TMEM40 FDFT1 KRBA1 PLAT ALPK2 MBL1P CDKN2B AP2B1 SCGB3A2 LSS TMPRSS4 RGS11 NIPSNAP3A GSS SLC41A3 CD300LD CCDC86 STMN1
PIGF_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PIGF_UP.V1_DN IGHA2 THY1 RPS4Y1 MYL9 TAS2R14 PDE1B DDX3Y CD5 FGA TTLL3 POU2F3 IGFBP6 PKLR GYPC LOC730101 KCNAB2 CRX SERPINA3 SMG6 IRF2BP1 MAST1 ENTPD3 TOP3B GPR182 psiTPTE22 PTPRH CSHL1 CEBPA SLC14A2 EDN2 SH3BP1 CLPTM1 C9 MYOG CCL16 CEACAM3 NELL2 CYP2A13 ACAT2 NCR3 PDE6A ZNF646 AK4 CCDC9 AOC4 S100A4 ADH1B ENPP2 ELAVL3 DHX34 CBFA2T3 PTPRU MAP1A KLK10 PPFIA4 KCNN4 ERF CACNA1C KCNQ3 GH1 DHCR24 ITGB4 RIMS3 NPAS3 SRGAP3 PXN LOC441178 MCF2L SPN PKD1 CTF1 PIP5K1A SPTB MYO1F MSI1 SHBG DAAM2 APOC1 KRT31 GPR17 AMELX GRIA1 GRM2 COL18A1 SRCAP MTSS1L LTK DLGAP1 TMEM158 TROAP CREBZF CTRL NFASC PDPN LY6E CTSW NFKB2 CLASRP LOXL1 C21orf2 NOS1AP PTGFR OGDH PITX3 GPR37L1 ARC FCN2 DOLPP1 SVEP1 CEACAM6 PIK3R2 ATP2B2 ENTPD2 VGF ZFHX2 AURKC UBE2H C16orf80 RRP7A NOX1 KHDRBS2 PKP3 DLEC1 TAOK2 PAX2 KRT9 LRRC23 SLC6A15 PAIP2B CYP1A1 GLYAT FOXG1 BMP2 USP9Y NR6A1 FZD7 OBSCN NPR2 LOC652068 SNX29 ERVK-6 HBZ SLC29A2 IQCK CACNA1H KCNC3 MLL2 SDC4 ZNF185 CDC20 COL11A2 HOMER2 GATA4 TMEM97 MEF2B TNFSF12 SHH TNFAIP3 PSG11 AVPR1B CDKN2C RFNG GRAP2 RAB5C ACTL6B TMSB4Y GSTTP2 CLDN9 SMARCD1 ATP1A3 C22orf24 IGFBP2 TRIO NUCB1 BCAM RELB ANGEL1 EFNA5 ALOX5AP CAMK2B GFRA2 SSTR2 GNAL SPRY1 EVPL UTF1 IGFBP5 PRPF19 DPF1 NCAM1 ZFR2 SLC30A10 NOS2 GNB3
PIGF_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PIGF_UP.V1_UP FABP4 LRRC17 MMP10 PTGS2 AMPH OSBPL8 ZNF674 ASCC3 TFPI2 NUCB2 CCPG1 CRYZ SCAF11 ROR1 ITGA2 ANGPT2 ATR SAT1 C19orf6 AKAP9 NEK1 SULF1 KLRG1 RPGR N4BP2L2 GPR37 SACS ARMCX2 RUNX1T1 ZNF451 STON1 MMRN1 RECQL IRAK1BP1 ZNF117 RFK GGCX XIST RASGRP3 PSPHP1 THSD7A GLRB SLC4A7 PHF3 AGL TWF1 ARMC6 BPGM ZC3H14 TWISTNB ABCE1 DNAJB9 RGS2 TTC37 RIPK2 TOPORS PPAT CPA3 UFL1 DHX29 TMED5 CRYBG3 CALB2 STAU2 IL6ST OPA1 SPRYD7 PHEX PRKACB HS2ST1 KIF5B F11 RIF1 ARL4A PISD TRMU SREK1 FAM208A GJA4 MAFK ABCA8 GRB14 MTF2 SP3 IREB2 AIMP1 NUP155 CLEC2B REV3L EIF2S3 VCAN THOC2 EFHA1 RARB C9orf114 PDCD10 SLC33A1 KIAA0040 STXBP3 LTBP1 NECAP1 SYNE2 NAP1L3 PPID ITSN2 CFH BAZ2B MARK2 CEP350 MKLN1 SOCS5 LARP4 AHCYL2 STAM2 MAST2 IL1RL1 DCP2 DMTF1 PGAP1 LPCAT4 TDRD3 BCLAF1 TRIP11 ACADM PEX1 TDG NEK7 UGP2 RCBTB2 RNF6 NRCAM DNASE2 MAGOH HIST1H2BM CPD HIF1A GMFB CREB1 TNFSF10 ZNF354A ZZZ3 TDP2 CR2 PSPH LGALS8 SKIV2L2 BCAS2 PAPOLA HSD17B4 ZNF268 MAP2K4 NAT1 STK38L HSPA13 MAPK6 ANAPC13 KIAA1033 CDC27 RRS1 CD2AP SUCLA2 MBTPS2 COL8A1 MTM1 TGFBR3 PLA2G4A MARCH7 UPF2 PCDHA12 RNF13 AGA BACH1 DNAJC3 PPIG TSPAN8 SLC38A6 ADAM9 HNRNPA3 TAF9 CCL22 SGMS1 RDH11 DZIP1 RAP1A ATP2A3 MIPEP SMC4 ATP13A3 CEBPZ SMC3 TTR
VEGF_A_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/VEGF_A_UP.V1_DN FABP4 RGS4 AMPH IL1RL1 SERPINB2 CDC45 DHFR VEGFC MEST GABBR2 ITGA2 ACE NEK7 KIF22 RGS2 TSPAN8 INHBB PNO1 RRP12 RRM2 SETBP1 NOC2L STEAP1 DKK1 UAP1 BCL10 PHKA1 SPTLC2 RIF1 MT1X CSE1L RPGR C19orf6 DDX21 PLK4 ZNF117 PPIG IPO5 NRP1 PTPRE PGAP1 KIF23 TWF1 SAT1 TRMU SMC4 AMD1 SULT1B1 ADAM9 PCDH7 YES1 HMMR ANGPT2 AQP8 MMP14 TMPO RP2 ROM1 CEP170 SCAF11 NUDT21 BUB1B PAPOLA MKLN1 RECQL DHX29 SLC4A7 UGP2 SACS DLEU1 CACNA2D1 BAK1 CPA3 USP13 VRK1 DLGAP5 ATIC RDH11 OSTF1 CCL23 NUP155 MMRN1 CTNNAL1 DNAJC13 MAPK6 NDC80 GPR4 B4GALT5 LRRFIP1 THOC2 MRPL19 KIAA0020 KIF11 IL6 GPR37 HIST1H2BN RRS1 MPHOSPH6 TNP1 C5orf30 NR2F1 C6orf105 TGFBI UCHL3 MAD2L1 POP5 CCDC86 NBN ZNF253 CDKN3 KLF9 EXO1 RAP1A CDC27 MAFK ORC2 LRRC17 EIF2S3 BCLAF1 NCOA3 CCNE1 CENPE RFC4 ATP13A3 TTC37 ZNF124 PRPF40A RAB3B CD8B CCNB1 TRIM25 CHM UFL1 MFAP3 CCNB2 ASPH CRYZ PSD3 DBF4 CEBPZ CBL TRAPPC8 ST13 LMNB1 MCM4 PLCL1 PRKACB ZC3H15 TFAM RASA2 PRMT3 SEL1L BAZ1A CENPA MYO5A AASS BUB1 MAP3K7 HIRA CCNH SLC7A2 RNF6 ITGB3 ARHGAP29 POP1 CDC42EP2 NUP50 FKBP5 CYB561D2 SLC30A9 CKS2 TTK MAP1B XRCC4 FLT1 LRP8 CNTFR BIRC5 SPAG5 RGS5 GATA6 TLE3 MDN1 RND3 MBD4 AZI1 ATP8B3 ACADM PTPRD ARMC6 PNN EPM2AIP1 AIMP1
VEGF_A_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/VEGF_A_UP.V1_UP MYL9 MN1 CCL2 FGA ICAM1 TAGLN TMEM8B DDIT3 PKD1 SMG6 TNNC2 CHRNA1 SPINK2 OR7E24 CORO2B MYO1A RELB DUSP8 IL32 HTR2A EMILIN1 PLA2G4C ITGB4 SDC4 ETFB KIAA1462 IRF9 HLA-DMA PPFIA4 SLC12A2 ZNF205 THY1 PSMB8 RFPL1 CCDC57 LTB AKR1B10 GUCY2D NFKB2 RHBDD3 IRF5 APOBEC3G COLQ PPP6R2 DBH UBE2L6 ENPP2 TNFSF12 MGAT5 LCAT HTT TLL2 CLIP3 KIAA0930 UBA7 CABP1 TP53I11 TRAF1 PART1 TXNIP KIAA0556 SEMA5A PER2 SLC22A2 NCF2 MIA SHC2 COL11A2 PYY CPA1 ZNF76 TCL1A CRYGD P2RX4 LY6E PTPRJ OVOL1 CRYGC FAM189A2 TCEA2 OPTN NAT8 ARL4C CD19 TM7SF2 RFNG psiTPTE22 TKTL1 CALCOCO1 MLL2 DCX ZNRF4 ENO3 IRS2 RGS3 ITIH4 MERTK GRIK2 CCDC22 MTMR11 FBP2 CLIP2 FEV KCNMB1 DDIT4 C21orf2 FMO4 MTSS1 ISG20 BMP8A TRAF5 RAB40AL SH3BP2 KCNC3 ECM1 KANK3 LOC650845 DSG2 MYO1F FPGS LHX2 CAMP C3orf37 CCS ALDOB PPL CLCN6 ZCCHC24 GDF11 ZC3H7B CD5 PIN4 HOXB5 FCGR2B NFKBIE MATN2 SPOCK3 LOC730101 OPRD1 RMND5B NKG7 AKAP5 NINJ1 SERPINA3 CIC EVX1 ABCA4 ABHD3 EPHX1 PTGFR HSD17B8 ETV2 MMP2 ID2 LMOD1 FKBP6 SUPT6H PAX1 AKAP3 TUB ARC CCL7 DTX4 ME3 NEDD9 CSHL1 ABCB10 C17orf108 IQCK LONP2 PLTP GABRA5 IFT140 CD79A DENND3 DYRK1B HDAC5 CACNB1 PHLDA1 GLI1 RBMX2 ATF3 ITM2A ENO2 ADARB1 INPP5J TENC1 ADORA2A DLG2 AMOT HS3ST1 CXCL11 SHH PTPRC HSD11B2 FMO5
BCAT_GDS748_DN http://www.broadinstitute.org/gsea/msigdb/cards/BCAT_GDS748_DN LIN28A HSDL2 PBLD ARL6IP1 GAS1 TCF25 COL2A1 LAP3 UROS MYBL1 ZNF318 C5orf42 RALY SLC27A6 HR44 RPS6KA5 CDK5RAP3 PDHA1 PABPC3 IGHM VPS13B ZNF273 ADAMTS20 BMPR1A RDH5 SLC35E3 PMFBP1 HMG20B LOC654056 FAM46A EXOC2 BASP1 ZNF32 CHMP4A SNAI2 CELSR1 ZBED5 ISYNA1 DDIT4 MLH1 SKP2 KLHL9 TTR ACAD8 CNPY3 MZT2A HLX
BCAT_GDS748_UP http://www.broadinstitute.org/gsea/msigdb/cards/BCAT_GDS748_UP MYB FGF20 GCNT1 NEDD9 LEF1 LMO2 DYNC1I1 SLC3A2 RUNX1 QPCT PKP2 MSX2 FLT4 ABCB1 AIM1 SLC39A14 DEFA5 BAMBI PLEKHB2 NPTX1 ASRGL1 PRG3 ITGA9 BAG3 CA2 FAM3C DDAH1 PHLDA2 FAH CEBPB C3orf52 GAD1 UBE2N COTL1 HHEX SRPX GCH1 FZD7 AQP3 C9orf3 KCTD12 WNT11 CASP9 PDE4D KLRC3 GADD45G LY6G6D TP53I3
BCAT.100_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/BCAT.100_UP.V1_DN LOC654056 EXOC3 CCDC53 SERGEF TTR KRT32 DSG3 EBLN2 NAT6 SNAI2 DKFZP434A062 C22orf46 TMPRSS2 IGFBP5 RALGPS2 DAZL PMCH B9D2 LOC643326 KLHL4 C10orf10 FZD4 KRTAP4-7 HCG26 GLRA2 CHRNA2 ZNF749 KIAA0319L TLN2 SLMO1 KRT19P2 DOCK3 IGHM PIP HR44 TBX5 C5orf42 CDH12 WISP3 KLF10 HIST2H2AA3 AMH PARK2 FAM46A ZNF711
BCAT.100_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/BCAT.100_UP.V1_UP DKK1 FGF20 LY6G6D BIK WNT11 ETV5 LMO2 ENPP2 DEFA5 QPCT ENO2 C1orf222 PPP1R1A GCNT1 PLEKHF1 CHODL RUNX1 FUT1 PTRF ENC1 GADD45G RBP1 GAD1 ITGA9 SLC7A8 ARHGEF5 DUSP6 TBX3 IRS1 CDX2 LBP EEF1A2 SERPINI1 IHH ABCB1 ERVMER34-1 HYAL3 BMP4 SORBS2 HOXA1 CRYM EFEMP1 HBA2 CD9 DUSP4 DBNDD1 DNAJC3 FLVCR2 SASH3
ATF2_S_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ATF2_S_UP.V1_DN IGFBP2 CHI3L1 DES NDUFA4L2 SGCG STMN2 PTGIS PTGS2 CSTA PPL FBLN2 CRLF1 A2M HAPLN1 CYP1B1 SFRP4 GALNT12 SLIT3 KCTD12 GCH1 NPPB PLA2G2A TCF21 SERPINA3 NEAT1 PDLIM3 TNFRSF11B CCL2 PTER AK4P3 MYO1D DPP4 DNAJC12 SVEP1 ABCA8 COL16A1 FOS SNCAIP SLC12A8 PLEK2 ANXA10 RGS5 C4BPA TNNT2 PTGER2 COL11A1 SIK2 CELF2 NPIP WT1 SLC1A3 CD302 ITPR1 ITGBL1 VCAM1 KCND2 ID3 ADH1B KLHL3 CCL11 AK4 COMP SDC3 PARD6B PLA2G16 ODZ4 PLN PNMA2 GMEB1 RGS2 VAV2 KCNAB2 SLC39A8 FGF7 SPINT2 FGF9 ROR1 TREM1 RARRES1 ITIH5 ADARB1 GPRC5C AADAC MN1 AIRE IL33 RNF39 VTN ID4 HSD17B1 NFIB MYH1 ZDHHC8P1 TAF1C PADI2 CCK PCSK7 GPRASP1 TLE3 ANGPTL4 GAS1 CCIN CBX7 ENO2 HCRTR2 CATSPERG COBLL1 CLGN CLDN14 KRT8 EFEMP1 KIAA1199 ABHD8 MGC4859 ADAM22 JUP OSGEPL1 ZP4 PLXNB1 COL7A1 COL15A1 PID1 CRELD1 NGF CSGALNACT1 RHCE GLRA2 IL1RAP DGKD CLMN MAGIX IQCG LAMA1 VASH1 SLC29A3 KIAA1456 ST6GALNAC2 OSMR MYBPH C16orf5 ADORA3 STXBP2 SORBS1 EVC NFE2 BMP6 GPT FMOD DAPK1 LAMA2 SERPINB7 PLSCR4 IL4R KLHL28 CRIP2 SBNO2 DENND4C SMAD6 IL1R1 TPD52 POLE DNTT SERPING1 SLC7A7 TMEM176A PISD PDE4DIP GABRD ATF5 TNFAIP6 IRS4 REN NXT2 BMPR1B ERO1L LTBP3 C1RL ST3GAL6 ABCC3 NPFF KBTBD11 GLTPD1 CCL17 THOC6 SLC4A2 ACACA CWF19L1
ATF2_S_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ATF2_S_UP.V1_UP SH3BGR CLDN1 ARSJ LHX6 GPER DECR2 PLEKHA2 C8orf4 IL8 C10orf116 WNT5B PRKCD NEFL FANCF MAS1 CD8A TRPC4 CD24 FSD1 CEP41 NNAT IL32 PITX1 C20orf195 FOXM1 LHX2 MMP1 NIPAL3 ENDOG CCDC81 HSD3B1 PAX1 C1orf115 GSTT2 SCIN HOXD10 VPREB3 TNFSF18 CACNA2D3 RSPH6A KRT81 ITGA8 CST1 RASGRP1 PAGE4 PIR IFNA21 KIF20A B3GALT2 MRAS ANKRD11 SLC13A3 STEAP1B TTR EZH2 GALNT14 GNA15 PCSK1N ANXA3 ZFR2 MLF1IP APOL6 PLCB4 RDH16 UPP1 PCNT TK1 S100A4 MMP8 PSMB9 ITIH3 ATP2B2 FOXG1 MON1B HSPA6 N6AMT1 ABLIM3 ALX3 MAP1B ARHGAP22 NFE2L3 MAGEC3 ZNF324B SATB2 TRPM2 RPL39L ADAMTSL4 HOXD1 FGFBP1 MYO7A GALNT6 SSPN OVOL1 HTR2B POMT2 HBD FMO6P TOP2A LAS1L DBNDD1 PRSS16 USP9Y PNLIP PSTPIP1 MCART1 ABCD2 PSPN UNG GSG1 CCDC94 DIRAS3 GNA14 GRHL2 CXCL1 F9 EPX APAF1 LOC647070 GPR63 COQ4 C8orf51 CUBN SEMA5A BAALC OR10C1 RGS11 MPZ CLCN2 S100A9 ARNTL CST5 CHML SYNGR3 PLAU RELN BARX1 ADRB2 PTGDS IL17RB AIM1 CTNNBIP1 MBOAT7 DLEC1 KIF23 NQO2 TNFSF4 NRXN3 DDX6 SLC9A2 GALR2 ASB4 PMEL HSD17B3 PPM1H RBFA C3AR1 KCNB1 TMEM156 CTRL TNFRSF13B ITGA6 FAM107A FAT4 CDKN3 PCDHA9 SLCO1B1 CHCHD7 INSL6 LRRTM2 NLGN1 FOXH1 DYSF TBC1D19 EFNB2 OR2B6 UGT2A1 B3GNT3 RSAD2 IL20RA SPDEF BCL7C SLC13A4 ETS2 NEFM ANGPTL3 ODAM ZNF804A KLHL1 FOXJ1 PML INA ACCN4 LRRC17
ATF2_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ATF2_UP.V1_DN CHI3L1 PTGS2 SDC3 NPPB PDLIM3 GCH1 FOS CCL2 ERAP2 PTGIS PNMA2 ADORA2B CSGALNACT1 PLA2G16 TCF21 NPIP GAS1 HOXB2 CECR1 GSTT1 KLHL21 SLIT3 TNFRSF11B HAPLN1 SVEP1 ANXA10 CELF2 AK4P3 RARRES1 CRLF1 NDUFA4L2 PC CYP1B1 PPL FBLN2 VCAM1 ACACA SLC12A8 IGFBP2 GALNT12 DNAJC12 SFRP4 MRPL44 TPD52 FGF9 PLN DGKD ERO1L KCND2 KCTD12 PTER LIMCH1 SPINT2 ROR1 PER3 FGF7 KIAA1199 PTX3 GOLGA8A PDPN SIK1 PLA2G2A ITGBL1 CD200 ZNF323 AADAC ZC3H12A MYO1D KCNJ2 CCL11 EDIL3 CDH13 SERPINA3 PLS1 NUPL1 NFIB ARHGEF3 ATP8B4 STON1 CDK5RAP2 C1RL CXCL12 PIGN SOD2 ZNF652 KEL CD302 GLRA2 CTH EVC ITIH5 C10orf10 SLC24A3 PLA2G4A SNCAIP GSR SLC25A28 ARNT2 CFH TOP3B CYBRD1 RAB11FIP1 ABCC3 ID4 PIP TREM1 UBXN2B CD68 SCRG1 FAM198B DENND2D S100A3 COMP AK4 MYH3 PCSK7 LOC399491 CCK HDHD3 BHLHE40 HMG20A RPS6KB1 POGZ JUP IL1R1 PID1 IQCG REV3L TP73-AS1 HS2ST1 RNASE4 SGCG ABCA8 MFAP4 GUCA1B SERPINB9 PKP2 CCP110 VTN KLRK1 CD1B PLSCR4 TAF1C GPRC5B RBL2 NEAT1 GPRC5C PELI2 STXBP2 PIM1 SPRR2B EFEMP1 SLC25A15 SMAD6 PPP4R2 CFB SP1 PISD BHMT IL33 SHOX2 MN1 IL1RAP SLCO4A1 TGM5 WISP1 EIF2AK3 ZNF432 PLEK2 HKDC1 PDE4DIP PTGFR SCD ACVR2A GPR37 AIRE SLC39A8 IRS2 CA9 AFF1 FRY HEXIM1 ST6GALNAC2 EDNRA FMOD DENND4C ADAM15
ATF2_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ATF2_UP.V1_UP MMP1 FOXG1 KISS1 GSTT2 NEFL WNT5B ARSJ IL32 SH3BGR CD19 STAT5A CLDN1 PAX1 GNA14 CST5 MAS1 LAS1L ABLIM3 PTPRT C2CD2L FABP4 KRT81 EFHD1 UPP1 SULT1B1 DGKZ TRPM2 PCSK1N C8orf4 ARHGAP22 DENND2A NNAT ITGA8 TNFSF18 ZNF639 MLF1IP TSPAN32 BAIAP3 GPR63 ENDOG PLXNB3 G0S2 GALNT6 PITX1 VIPR2 LOC647835 GMPPB NES SMARCAL1 LIPE POLD1 FOXM1 RNF43 CORO2B MAP2 PELP1 HSD3B1 KRT7 APOD TSC22D4 KCNK3 ZNF324B GNA15 EMILIN2 ISLR CCR4 MNAT1 FSD1 ABCB9 RAD51 GINS2 TRIM14 HSPA6 PRSS50 BAALC PLK4 C3AR1 S100A4 AKAP4 LRTM1 NEFM HPGD ADM2 APAF1 CEP41 DNAJC15 DCAF4 CENPO LOC80054 CD8A RSPH6A KCNAB3 CHRNG ICAM2 FGF16 PTDSS2 PLBD1 LYPD1 NFKBIL1 FGR HOXD11 TCIRG1 PCDHA9 DTL HOXB1 FGFBP1 SAG ALX3 PTGER1 NEUROG1 PAFAH1B3 PLCB4 MELK SCUBE3 PRKCD IGF2 OR10C1 PODXL NME3 ANKRD11 HMX1 RBP1 FGF20 STEAP1B AMELY CD3D LIG1 ASPN INPP4B REEP2 ADAM28 ZFR2 LOC646372 SPRR2C C1QTNF9B-AS1 CCDC94 TBC1D29 CLDN15 FSHB FANCF PLAU SLC5A2 ALOX12 PACS1 APBA1 TRIM9 ALLC TK1 NEO1 GINS3 PCDH1 NCAPG STRA6 GTF3C5 PIN1 GZMK PLCB3 MAGEC3 GDF10 KIR2DS1 GALR2 RNF2 FOXL2 FAM102A CARD9 CNTN5 LILRA5 CBX5 COL2A1 SERPINB2 ANKRD34C PNLIP NEDD9 DNASE2B NFKBIB GUCA1A BRAP PRMT8 GRAP LTB TSSK2 TNFRSF13B KCNA2 CA14 GPX5 PCP4 DIP2A FRMD1 ATP13A2 HOXD1 NRXN2 VRTN
WNT_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/WNT_UP.V1_DN ST3GAL2 C6orf27 EIF2AK2 ADRB1 PHOSPHO2 CSF2RB MMP3 KRTAP3-1 RAMP3 PXMP2 GSTA4 ABCA1 SH2D2A PCP2 IGFBP6 PLXNA1 GPX3 NFATC2 CYBA KRT6B HLA-DRB1 PRH1 RSPH1 LGALS3BP HSD3B7 DNAJC4 TBXA2R AGT GGNBP1 EFNB2 BPGM TSPAN5 CORT KCNA2 PLA2G1B MAPK7 SLC22A18 GPATCH2 MET PTGS2 BIK TUSC2 ST6GALNAC6 CLEC4D LAMA1 ADAM12 TGFBR1 GFAP SYT8 CLN3 DNASE1L3 SYNGR4 TAL2 KCNA4 LBP SDSL DNAJC11 IRF9 F10 NCOA2 ISG15 NT5DC2 HDGFL1 TFR2 COL9A1 IL12RB1 C8orf85 ADAR NGEF SLC1A6 CCDC130 CD79B FAAH MYOG FAM60A SEPT6 HES3 FZD7 NEO1 USP18 STC1 ASH2L GBP4 KCNA3 TRAPPC5 CD5 STK11IP ACVR1B KITLG KCND1 LHX1 VIM VEGFA MRAP SERGEF CNTN1 FOXN3 CELF1 DARC MEP1A HOXB5 PIGN DPF3 SPRR2B TLR6 LHB SYT11 THBD DDX25 IRF7 HEY1 HLA-DMB TSHB CD48 VPREB1 MAP3K2 CFHR1 CMBL CEACAM1 PIM2 NGF ABCC3 TANC1 ATP7B GRIN2C CD93 CMPK2 OAS1 G0S2 KDM5A HAND1 MAK16 ADCY4 CASQ2 LSR OCLN PPP1R1A DIO2 RASD1 NELF TGFBR3 ETV4 CECR5 APC2 TNFRSF21 PTPN22 ADAM2 IFIH1 CYTH1 ADAM19 AIRE FBXO8 CD44 TNFRSF8 PLA2G10 C16orf89 UBR1 GABRG2 CPN1 AKR1E2 NAGK RAI2 DDX46 CDO1 PCDH7 NMT2 TNNI3 OLFM1 GRM8 PCDHA10
WNT_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/WNT_UP.V1_UP SDC4 KRT86 POLD2 TCF7L2 AKR1B1 KCNJ9 PRSS29P SLC7A2 ISLR CHRNB2 SEMA5B NBL1 XCR1 MAZ COL4A4 PLAC9 HPS4 TFF3 PPP1R3C AP2S1 FOS MC1R MAPRE2 ZNF358 TEN1 C8G MST1R SERPINA3 TGFB1I1 MAPKBP1 ADAM28 CKAP4 LCN2 VAX2 POMC BTG4 NTSR1 STS FNTB EDA THYN1 GDF15 POSTN AP1G2 GLI1 C11orf9 GALNT6 FGF18 CYP4A22 SERPINF1 CXCL1 FPR2 P2RY2 CNGA2 CPS1 DCC OXT RASGRP2 RBPMS MYOM1 PKLR KCNN1 GRIN2D TPK1 CHRNA7 PDYN AURKB STK36 TSPO2 LTA IL6 RSPO1 INSRR UTF1 ST8SIA3 GALNT11 A4GALT IL12B NEUROD2 CDH5 MFAP2 SAA3P BAI1 F2R ZFP92 UTS2R LOC646627 UBXN11 LANCL2 ATP4B IRX3 KLRC1 SNN CCL2 HS3ST1 POU1F1 HOXD3 MAPK8IP1 CYP2E1 VAMP1 REG1B MTF1 STRN4 RAD9A KCNC3 FICD CCR8 KIFC1 THRB GPR97 TCF3 HES5 CD96 PPYR1 ENTPD2 DTNB CLDN6 UGT8 CLDN8 KCNK4 CLEC16A MYO5B DNAJB13 SYT3 DHCR24 NF1 CD74 LRG1 PLA2G6 MAST2 PDC SETD6 DBP LTB4R CRMP1 KDELR2 FXYD3 RNF112 CLEC4E PTPRO INSM1 KRT85 LCAT SFN GJD2 AP1B1 PRL FABP5 KRTAP8-1 BCL7C DPYSL4 CKMT2 FOXK1 PPT1 CYP2S1 KCND3 PMF1 EYA2 INHBB MKLN1 KRT27 CFC1 CCRL1 HTRA3 NLRX1 RPAP3 PKIB SLN CCR3 TEF OLR1 SYT9 KLRD1 GNMT CCDC86 IGF2 HYOU1 HOXD10 GHRH RETNLB
ATM_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ATM_DN.V1_DN PAX1 PRDM11 TSPAN32 LOC51190 GDNF ARSF NLGN3 PPARGC1A DSG3 SAG EPHA1 STX2 ZNF208 STK17B ITPKA C17orf88 HHLA2 SLC24A2 RETN TLR7 GPR22 LSM5 FER SEMA3A KCNC4 GMIP TRPC5 MRAS CCL11 CTRC POM121L9P GPR68 MAG DNAH9 TMPRSS2 HAAO XIAP CD69 TEX14 PLA2G3 WASL F10 CRYBA1 GABRB2 ANGPT4 GPR65 WNT2 PCDHB3 ADCY10 CES1P1 ACVRL1 SRD5A2 SPAG11A TLL2 TAGLN MDFI HS3ST3B1 NEUROD1 FCN2 ST3GAL1 CTAGE5 PLXNB1 PTPN11 SULT1E1 PPIL2 ITGB4 ADRB3 CHIA EDN3 PRSS21 OPCML HUMBINDC ZNF137P KCNG1 GTF2A1 RAPGEF4 CD14 MAGEA4 NTRK2 CYP1A2 IMPG2 HIST1H3B HMHB1 AP4S1 IFI27 SSX3 MMP27 LILRA2 IL1RAPL1 CEACAM6 KCNE1 FBXO24 TCEB3B KIR3DL2 PLSCR2 AZI2 CYBB TFEC TEK NNAT GRIN2D ZFP36L1 IL21 TCAP PRSS50 LY6G6D ALX3 PRRG2 SCGB2A1 PMEL FGFBP1 SPTLC2 CXCL3 FOXB1 ABCD1 RNASE2 PI15 SETD4 SLC10A2 SLC17A1 CRYGC CLEC3B SMPX RASSF9 KCNIP2 CYP2J2 GRM8 CLEC4E GPSM2 HCRTR1 TXNRD2 AVPR1B LHCGR AGXT RHAG RDX CSF2RB PLCD1 LPAR3 BMPR2 ENTPD7 FMO5 FCN1 CFH SRPK3 CLCN4 MS4A2 IFNA21 KCNQ4
ATM_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ATM_DN.V1_UP QTRT1 XAF1 PIDD KCNJ4 N6AMT1 MYL2 RET FCGR1A LIM2 GLRA2 TAT ICAM5 TIAM2 COL9A3 BCL2L11 ABCG5 DYSF GRIK1 CIITA IGFBP4 TNNC2 PTK2B SLCO1B3 BEST1 DNAI1 CYP4F3 MYOM1 SIPA1 SLC22A6 EFNA1 STAG3 FSTL3 TRIM31 CNTFR CD8A TEKT2 FGF5 PHKG1 ITIH3 NPC1L1 RAB3A CHGB SPAG4 SOX21 XCL1 CD36 AKAP5 NDRG4 SLC6A1 VAV2 PLTP ME3 NUMB CCR10 IL2 HIST1H3F CLCN6 BDKRB1 SARDH FLT1 ACCN4 SYN1 NGFR GPR162 TXK ECM2 RPE65 SLC7A5 CYP2C9 CLIC5 IL24 H6PD GKN1 APBA2 HSD17B3 HCAR3 ADARB1 C15orf2 KRT85 CYP24A1 LHPP ABCA8 PROL1 PSG5 P2RY1 NFIC CA6 PDE6G CD19 VEGFA CEBPE SNCB EPN1 ENO3 CAV3 HSD3B2 BCHE TTR ACACA ADAM18 CPA3 OCM DLX6 PPL TREM1 TNNT3 CSF3R RSPH6A F13A1 ZNF214 ULBP2 GHRHR HPR SULT1C2 MEP1B PRODH2 S100A3 NFKBIL1 CRHR1 RECQL4 GJB1 LIPE SLC5A2 TRAF1 GDF2 LCT REL GCM1 BDNF NDST4 S100A2 RGS12 CLDN14 CLIC2 GAPDHS LHB GAB2 PARP3 HRK FCGR2A CST4 ZNF324 ZNF215 CRHR2 SRD5A1 PARVA
P53_DN.V2_DN http://www.broadinstitute.org/gsea/msigdb/cards/P53_DN.V2_DN RAB4B LLGL1 PLEK2 HP1BP3 ELAVL2 NUDT6 BMPR2 DIO1 AGPAT3 CHD1L RAB38 CFD GPSM2 PBX2 SERGEF FAAH RNF17 NKX2-1 HOXA11 PGF FRS2 GMIP SMPX CNTF TNNC2 SLCO2A1 NRXN3 GUCY2C PPYR1 ACSM3 HBD GJA10 PER3 TP53TG1 NPL PTGDS FKBP5 SYT17 GZMM SLC24A1 IGFBP4 TP73 C5AR1 C1orf21 SIL1 EPHA7 ALOX5 EYA1 ANO2 HOXD13 EVC PNMA3 PPP1R17 BCAT1 HTN1 GNA13 PRMT8 HCG9 CCNF TINAGL1 HPGD HIST1H1E CYP39A1 PNOC NTF3 TRPV6 GAD2 PRICKLE3 RAD52 SLC6A3 GPR75 TAF12 POU3F2 KCNJ8 HIST1H2AI SCN9A ITGA4 RASAL1 IGFBP6 TDRD1 LIPE E2F2 SSTR2 CLTCL1 LILRA2 NFKBIB ENPEP BEST1 ELL2 FABP4 SNAI1 ZNHIT2 RAB17 SLC27A6 ABCG5 CDADC1 PTPN11 SSTR1 CLEC4M TULP2 BMPR1B KCNJ9 CENPA KCNIP1 RAB8B PDE6H HNRNPA0 SERPINF1 IL17A FPR2 BMP3 SNTB1 HSF2BP MMP16 QTRT1 TTR HOXB3 ATP6V1B1 GRK4 ATP4B CYP27B1 SREBF1 MYBPC3 MTHFR ANPEP RNF2 EPHX2 HOXA2 PCDHB13 NOL3 PPIL2 ARNTL SERPING1 RECK PIP CST4 HS3ST3B1 BCL2L11 SNPH ADAM11 HMMR TLR1 ACOX2 NDC80 SELL
P53_DN.V2_UP http://www.broadinstitute.org/gsea/msigdb/cards/P53_DN.V2_UP CCL20 CXCL2 MPZ RELB TNFAIP3 IL8 SPINK1 APOL3 TNFRSF9 INPP5D SLA PRDM11 CLEC1A PIDD GPA33 RORC RIPK4 SYN1 POU2AF1 TFAP4 NF1 IER3 CHST8 GALK1 HIST1H1T CD83 BARX2 CYP17A1 INSL4 PKD2L1 TUBB1 PYY OSGIN1 NFIX RND2 FPR3 ALOX5AP CD69 CYP2D6 PRRG3 CH25H NFKBIA CXCL6 TNNI3K CYP2C8 LALBA SLC38A3 TNR CTLA4 AVPR2 MAGEC2 LGSN PF4V1 RHD PRTN3 SPRR2C GUCY2D ANGPTL3 IKZF1 CCL4 MOG PTX3 H6PD BFSP2 P2RY11 RFX2 EVX1 INSL3 TPTE FZD9 ANGPTL4 IL1RN RNF39 XAF1 CD68 CXCL1 IL1RAPL1 PRKCE DPYS EML3 SPRR1B NCKAP1L FCRL2 MMP13 WNT3 BPI POU6F1 FGF22 HAO1 SARDH FOSL2 PCDH1 NTSR1 CXCL5 TP53 P2RY6 ATP12A PDC HIST1H2AB ME3 CLCF1 CA3 RFPL2 C4BPA OSGIN2 GSC2 SLC16A4 PTK2B PCDHA6 CXCL12 HS3ST2 MMP3 KRT14 CACNG2 CEACAM5 AMELX CHRNA10 ANXA10 PPEF1 MT1G ETV5 CD5L EVI2A DLX6 RQCD1 NTRK3 OR10H3 GYPB SLC15A2 CDH4 DPF1 LRRC32 KRT31 HTR1E GP5 CYP2A13 FOXL2 RGR KCNMB1 KCNK3 TDRKH ADAM12 BAX MMP17 ITM2A SDC4 SLC4A10 IL36A
RELA_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RELA_DN.V1_DN BMPR1B MYOC MYOM1 SLC12A5 KCNJ15 CDON PRRG2 RHOH UTS2 MST1R LCE2B FMO5 TBX5 WNT2 HTR3B CALY CLDN6 TFF1 KCNJ1 TRAF1 MYOM2 NFE2 TACR3 PVRL1 PTN TM7SF4 HDAC9 SRPX2 HOXD3 PRSS8 HIST1H2AE EMR1 RAMP1 DNMT3A MMP16 DUOX2 LUZP4 GCNT1 HIST1H4B KLK7 KCNA2 C3orf51 CA9 FTCD STAG3 HIST1H4L CAPN9 F13B PLA2G10 IL7R SLC9A5 GDF5 TACSTD2 PC CXCR3 PTPN7 TNNI3 OXT CYTIP HAS1 KLK11 SLC22A18AS MUC4 PSCA VEGFC SEMA3A C1orf21 DSG3 CST1 TAF13 GPR3 IL17RB CCNK DLK1 CXCL10 CUBN RBBP9 IDUA SPRY4 L1CAM HSD17B1 OR10H1 KRT1 NRXN3 KCNK5 GSTM1 ADRA1D TMEM176A PPYR1 TFEC NPL MBNL2 PKLR CD53 GNMT CH25H CRISP2 MC2R LOC51190 DNAJC15 RFX2 SERPIND1 NEURL HTR3A MECOM RBMXL2 TFDP3 ECEL1 TXNRD2 C7 GPR77 CHIT1 RAB30 SIGLEC5 CASC5 HRC TNFRSF8 TEF RASA3 GNRH2 EGFL6 CXCL11 GPER TPTE CD247 KLF8 IL2RG ATP6V0A4 PSD AVP APCS CLCN1 RBP1 XPNPEP2 SEZ6L GAGE3 P2RY6 NNAT LGALS4 SSX1 SPINK2
RELA_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RELA_DN.V1_UP FOS EGR1 GJB1 PTGS2 AGPAT4 ZNF324 C10orf10 GLYAT DUSP8 FZD9 MAK F3 ZNF286A FOSL1 THBD KCNA1 CST5 HTR1F MTMR11 TPMT DYSF KLF6 GPR183 P2RY10 CLDN15 FGF2 INE1 WASL PDE5A PGGT1B RNF25 JUNB GLS2 ADAMTS13 TNFRSF9 VDR FOSB KDM5D SIRT4 LHCGR LILRP2 CTF1 KCNC4 GADD45B PPAN GNRH1 ZFP36 EGR3 PAFAH1B2 MS4A3 ATF3 FHL5 SAMSN1 TANK GAD1 RIPK1 CELP XCL1 USP9Y TNC ZNHIT2 DEFB1 ZFP37 AP4E1 BIN1 FXYD7 P2RY11 JUN PEX6 INTS6 IL1B ATP2A1 TEX14 LGMN CHST1 NTM SLC6A14 FGF17 KMO TRIM38 PDK1 NOVA1 KCNJ16 SIRPB1 CDHR5 APOB PIP MC3R NFIC DLGAP1 PPP1R15A BCMO1 DGKI ZNF165 FLRT1 GAS7 VEGFA GRAP CDK5R2 KLF10 RNF39 NLK APBA2 BPNT1 SCG5 ATP8A2 SRCAP GPR85 SNAI1 MEP1B PRDM11 SNAPC1 PRKG1 MYBPC3 GPT KCNQ4 CCL2 GHRH EFNA1 CYP26B1 SLC27A6 ESM1 MAGEB4 TLX1 ULBP2 HOOK1 MLL2 LMO7 NTS TREX1 CRB1 PODXL2 ZNF222 LAMC2 ZFP36L1 DNMT3L NOL4 DAPP1 F9 VEGFB ETFDH CD38 ATP5C1 WRNIP1 CDKN2B PNLIPRP1 SLC7A1 CRYGA CLK1
P53_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/P53_DN.V1_DN ACTA2 PRAME SPP1 SLC16A4 EPB41L3 PLXNC1 GREB1 CYFIP2 IFI16 RASSF2 HGD VCAN ELOVL2 PTPRM IRF4 TNFSF9 GAL3ST1 VGF HOXD8 MITF L1CAM CXCL1 ABCC2 CDKN1A BCL2A1 SLC6A15 IFFO1 OCA2 NCALD FABP5 NRCAM GPNMB SLC24A5 LY96 DCT ALDH1A1 VLDLR FRMD4B SLC26A2 TSPAN7 QPCT FBLN5 LAT HSPA12A GLDC PDE4B PMEL CRYAB GPR137B D4S234E GRAMD1B BTG2 ITK PLIN2 S100A1 STOM ECM1 TRIM22 CYP27A1 RPS4Y1 ADCY1 KBTBD11 AJAP1 CPVL ITGA4 FAM50B RGS20 BCHE STAT6 MAL NINJ1 DDB2 CD247 TFPI2 GPR143 CBX4 CHL1 IGFBP2 TMEM5 STAT4 CAPN3 SOCS3 CASP1 FXYD2 GPRC5B FGB BEX4 COLEC10 ADRA2C SLC26A4 TRAF4 SPG20 SOX10 PTPN13 APOC1 DOCK2 NDN TRIM38 VIM CPS1 UGT2B7 BAX MLANA MYOM2 APOC2 NAMPT FAS ZNF516 TYR PLA2G4A ZFYVE16 CD1D GFRA1 NID1 ADAM23 NR4A3 ST8SIA1 MATK BASP1 NAV3 HSPA2 VPS41 FDXR MTUS1 PPM1D CDH19 GAMT NR4A1 CHGA RHOQ RAD51C AKR1B1 CA2 CTSK TENC1 GAS7 TDRD3 RUNX3 HMOX1 ARMC2 MIA ADA S100B RENBP KANK1 NEFL PRG1 IL2RB MMP7 LAMA1 SGK1 MGLL ACADS ACP5 CTSL1 FGG NRP2 ARHGEF10 NEFM SLC39A6 CDH1 THBD FAM155B ESM1 GBA GAPDHS ABCA4 OAS1 SLC19A2 PLCB4 CTSZ TM4SF4 GLS ST3GAL6 ST3GAL5 TAGLN3 KCNJ8 CA12 IGFBP7 TP53TG1 HOXB2 DDX3Y MYO5A DFNA5 ARNT2 SOX4 PDE1A B3GNTL1 KCNAB2 ITGAL IL1R1 C17orf108
P53_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/P53_DN.V1_UP F3 CDKN2A DKK1 PRDX2 PRSS3 PRSS2 MEST EFNB2 ZNF44 NR2F1 CDH11 LSR LOXL1 SLC16A2 COL1A2 AUTS2 psiTPTE22 EFEMP1 ADORA2B COL3A1 MARCKS RBP1 UCHL1 RAMP1 KRT19 CPE BMP4 AREG CXADR G0S2 CRIM1 ProSAPiP1 PLCE1 SOX9 EXPH5 PITX1 COL17A1 CD9 CYR61 SCNN1A PODXL AGR2 AXL MYCL1 TUBA4A KRT15 AIM1 LPCAT4 IFI27 TMEM30B GSTT1 KRT18 S100P TSPAN8 NEBL YAP1 LAMP3 RNASE4 AMPH LRIG1 VIPR1 SPRY2 SCRN1 ITGB4 CEACAM6 FBLN2 DSP AZGP1 COL13A1 PPARD RP2 VASP NMNAT2 SMAD6 SMAGP EGFR CD24 KIAA1199 DHRS3 INHBB GLUL KLK1 RABGAP1L KAT5 CTNNBIP1 GPSM2 FOXN3 CLDN3 IL18 EPCAM ZNF165 CTAG2 SPINT2 CAMK1 CHKA CDKN2D YES1 FHL2 TACSTD2 GRIK2 SYNJ2 CLTCL1 KLK10 CA6 TOX3 UQCRH CDH13 RRAS2 LRRC42 EDIL3 SDC4 PTPRH HIST1H2AE PPL MAFF NDC80 KHDRBS3 GP1BB C19orf21 ANKRD1 FYN CST6 BIRC2 THOC1 RNF11 NMU DSC2 IRF1 CNN3 DAAM1 UNC13B CALB1 ANXA1 ADM HDAC9 SULF1 IGFBP6 MSLN ELF4 HAPLN1 MYOF PTK7 TGFBI REEP2 CLIP3 ANXA2P1 PLAU ARL4A PPARG CORO2A OLFML2A ZNF415 AHR SERPINB5 LAMB2 ZNF185 C4BPB MEIS2 MARK2 SH3GLB1 CNR1 LTBP1 SLIT2 INPP1 SCG2 ZNF160 MAP3K5 KLF5 DMD BCAR3 ASS1 UGT8 OIP5 NR2F2 LHFPL2 MMP1 CAND2 CAT TPBG NKX2-1 USP1 APBB2 CFB SAP30 ITGA2 TJP2 PTN BCL10 MTAP ENPP4 SUN1 ZNF799 ME3 SNHG3
BCAT_BILD_ET_AL_DN http://www.broadinstitute.org/gsea/msigdb/cards/BCAT_BILD_ET_AL_DN EFR3A IL1RAP CLK1 RASAL2 SMAD5 TAF1D ATP9B GCLM ARHGEF18 NBPF10 OSBPL10 RIF1 PRKDC STARD13 PRPF38B IRAK2 CTBP2 ATP10D PTHLH FRYL FAM182A IER5 SRSF1 SORL1 ANKRD28 ARHGAP29 SECISBP2 LSS SMURF2 ZNF281 PUM1 IL1A SHC1 TUG1 GRID1 ASH1L PLAGL1 LNPEP ISCU TNFAIP3 COPB1 ARPC2 ZSWIM6 H2AFY RAP1A ZNF236
BCAT_BILD_ET_AL_UP http://www.broadinstitute.org/gsea/msigdb/cards/BCAT_BILD_ET_AL_UP CYP24A1 FOXQ1 EEF2 ZNF703 AXIN2 CD151 CAPS RPL37A MYL9 ACTN4 KRTAP2-1 PALMD STXBP2 RPS6KA1 BMP4 CALR SLC27A2 B4GALT1 HMGB1 CTSD KLHL15 ICAM5 DTX2 LOC653605 CASP4 LOC126536 RPL27A TCF3 FHDC1 CD2BP2 CNOT3 IGSF8 DACH1 WIPI1 TAGLN SIRPA C4orf36 SLC35C2 DKFZp434J0226 MTCH2 MYADM TMEM63B LOC648470 CAMKMT ST6GALNAC2 NDRG4 LOC100288594 SCAMP4 DTNBP1
E2F3_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/E2F3_UP.V1_DN TGM5 POP1 LYPD3 LOC645238 EIF3CL UTS2R ADM2 IRGC BYSL LOC79015 RAP1A PLAT LHX6 BCO2 KIAA1659 ZBED2 MFSD2A SPTB PRSS33 BDKRB2 NR6A1 IL6 MMP1 LOC643650 GRID1 WT1-AS ARHGAP18 PC KRT80 POLR1A RUSC1-AS1 FBXO27 KIAA0754 GAS2L2 HSD17B3 DKFZp547G183 SPRR1B EBLN2 LOC148189 LOC647357 ETV3 APOBEC3G LIF PRO2852 TGM2 DCC FBXL19 ZNF782 C15orf27 CDH15 MARK2 C20orf106 LFNG C8B LOC645352 SNORA28 ARL15 SH3TC1 ZNFX1-AS1 SERPINB1 CBX3 GALNTL6 RARA IFNE NYNRIN SPNS3 S100P SH2D2A SLC6A14 RBM4 SRGAP2P2 MEGF6 URB1 LOC643396 SOX1 PCDHB4 HSPA6 NRL MGC3771 LINC00173 BLID SNAPC4 B9D2 RAB43 DTWD1 PCNXL3 SLC2A6 RIF1 ADAM8 EREG CIITA INTS7 IRAK2 ZNF3 IFNA13 LOC285456 C16orf3 STXBP5L GPRC5A KLHL28 PPARD HOXC4 MRPL55 ZNF135 C7orf54 HAPLN4 WASH3P LOC389834 NKX6-3 LOC642441 SLCO2B1 CXXC1P1 MMP3 GIPR LOC642645 HSD17B7P2 RUFY2 FUBP3 LOC401588 SPAG11A OLFM1 ZCCHC7 TBRG4 PPAN LOC100133091 DOK7 EMR2 FLJ21272 STX1A TMPRSS6 GPR110 SNHG3 KCNQ1OT1 LOC642398 LOC90784 RSPH6A NT5C NAT9 GTF2H2D LOC285181 STK40 LOC145474 CBLC C16orf74 KIR2DL4 TAF15 MGC20647 LRRC8E PCSK9 CLEC7A LOC100421561 PVT1 ZBTB49 LOC440157 ESF1 KRTAP2-1 MAGOHB RNF215 TLR2 NACC2 C1orf201 FAM164A TREM2 GJB5 FLJ40292 NCKAP1L THBD B3GNT3 LOC643328 C21orf15 AXIN1 N4BP2L2-IT1 ANKRD46 INO80C FAM86A CASP14 LOC642826 ZNF284 PODN PMAIP1 NUPL1 ZNF646 OR6B1
E2F3_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/E2F3_UP.V1_UP ENO2 SBK1 CCNE2 TMEM155 MMP15 CDKN2C SYNM CD83 ABHD15 ZDHHC23 SAMD11 MYB CCNE1 RRAGD ZNF483 CEBPA C6orf168 TM6SF1 UBE2QL1 KISS1R ZNF367 TMEM158 EML6 FGFR3 GCH1 FGF9 CMPK2 TPPP FAM150B SMAD6 ABCG2 PDXP ZNF703 BAI2 PXMP2 CSPG5 CHST7 SHANK3 C12orf34 ZDHHC14 PTCH1 TMOD2 E2F7 SNX10 SAC3D1 CDKN1C RAB9B EPHX4 CBX2 LEF1 HRK HEY1 TMEM121 TMEM106C IL17RB INA DSCR6 NEFL CYP26A1 SLC27A3 MNX1 HBA2 NAT8L FAM43B SEPX1 RECQL4 GPR160 ZDHHC12 GAD1 ANTXRL UNG FAM92A1 MEX3B KCNS3 FOXD1 DCK LOC202451 ZIC2 DDAH1 INHBB MANEAL SEPT3 SLC27A2 HPGD SLC30A4 CHML TSHZ1 RASGRP1 CABLES2 BRI3BP GKAP1 C11orf96 CRY1 SYNGR3 EEF1A2 PEG10 POLE REEP1 LOC401034 CCP110 UGT8 CHST1 RTN4R ARRDC2 PCNA ZFP30 HEY2 MICB ANKRD18A PLXND1 TIAM1 KHDRBS3 EPB41L3 NPTX1 NPAS1 SAMD1 CHRDL2 ATRNL1 DCLRE1B EGR2 FAM158A NUDT22 FEN1 L3MBTL3 LIN7B POLE2 NR2F1 RAB26 TIFA PIN1 DTL PDIA2 CDC20B C20orf112 GINS1 TAF5 LMO2 FUT5 FAM78A JPH1 FANCA HOXA9 APOLD1 TSPAN5 SLC6A2 KIAA1804 TP53I13 C9orf125 LOC646762 LOC92659 PLSCR4 LRP4 HSPA2 RYR1 EGLN1 RTN4RL1 ATAD2 ESX1 RASD1 DDX11L2 DHRS13 ANKRD43 TLCD1 CDK19 C11orf75 CHST2 MBOAT1 LOC645030 SHISA8 CDK5R1 TLE2 RHOBTB2 SIX5 TMEM201 TAS2R38 SNRNP25 LOC283454 LOC283658 KLF16 SH3BGR KCNA6 PCOLCE2 LCN6 EFS LRRC45 MFHAS1 FBXL16 GPR137C NGEF SLC4A3 ATP6V1E1 CDRT15 WNT9A MAP6D1 SYN1 TMEM97
MYC_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/MYC_UP.V1_DN ZNF236 LYPD3 TGM5 GPRC5A PLEKHG2 RAP1A HIST1H2AC MMP1 ARNTL ANGPTL4 SPRR1B IRGC UTS2R NTF4 BCO2 S100A9 FGD2 CLCA4 LOC646014 ZBED2 PLK5 CPNE2 NRP1 MICAL1 OSBP2 MEGF6 GAS2L2 NBEAL1 TLR2 C4orf49 MN1 LOC692247 SPTB SERPINB1 MGC20647 SPOCD1 OR2A7 PLAT PBX4 ABHD3 LINC00341 PC C16orf74 GRHL1 IL6 NGFR GPR110 C1orf159 PRSS33 ATXN7L3 TGM2 MMP3 ProSAPiP1 ADHFE1 KIAA1841 PDK2 PODN SPNS3 LOC645238 DUSP18 C11orf80 MAP3K6 RUSC1-AS1 REC8 GRID1 NYNRIN MST1P9 JOSD1 TUBA1A CXCL3 EREG B9D2 HOXC4 C20orf181 TNFAIP2 PJA2 C10orf10 VAMP1 C1orf54 LINC00293 PLK1 SRGAP2P1 NR6A1 CD1D TP53INP1 NID2 LINC00260 C11orf72 FBXO27 FAM73B IRAK2 CXXC1P1 HEG1 TTC7B LINC00173 POGZ PLEKHA2 BANF2 KRTAP2-1 CCDC82 EIF2C4 ATL1 PSMC3IP CARD16 AGPAT9 PRO2852 S100A8 ACAT2 LOC643650 SLC6A14 GALNTL6 SRGAP2P2 GJB5 MEG3 CDCA8 RHBDL2 MTMR11 WNT5B LOC642441 PTK2B C11orf95 FGD6 TEP1 SKIL RNF19A RNASE4 IL1R1 MMP9 C21orf15 GBP3 RAB4B SLC6A1 TRPM4 WNT9A SLITRK6 DSG1 GINS1 SDR16C5 MCHR1 BCL9 CLSTN3 ASAP3 RNF152 SMURF1 IL18 ZNF467 AGER LOC145945 LMTK3 BCAR1 WDR47 KRT80 ZNF334 PTPRE CLIP2 AKR1C3 ARRDC3 ZNF789 CA7 CDKL5 PAK3 LOC285181 PBX3 PCDHB4 C1orf201 HIP1 PPM1N GAMT SYT1 PDZD2 KATNAL1 ZNF414 MLL2 PPARD C19orf21 TRIM56 PRRT2 KLF12 LOC79015 HOXB2 SAMD9 CCL20
MYC_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/MYC_UP.V1_UP HSPA6 TMEM201 RRP9 GEMIN5 DUSP2 RRP12 UBIAD1 ADCK3 PRR3 KLF16 SSSCA1 P2RX5 GLRX5 SLC25A26 ECE2 TGFBRAP1 UTP14A DGAT2 PIGW TECTB CCDC78 AGPAT3 ERVMER34-1 C10orf2 PLD6 CHKA CD3EAP JPH1 SMYD5 ZNF215 C12orf66 EXOSC5 FLJ10661 RPP40 GPD1L PIM2 N6AMT2 SLC19A1 C19orf48 PES1 NDUFAF4 LEPREL4 PRR7 C16orf7 PLA2G4A TMEM97 FLJ41649 MPHOSPH10 FUT5 TOP1MT TAF5 SLC25A22 TSSC4 C12orf24 SLC6A15 PCOLCE2 POLR1E CHCHD10 SLC27A2 METTL1 TMEFF2 GLS2 SAC3D1 PMM2 HS6ST2 DENND2D FARSB FOS TTC18 ZNF593 TDRD10 SLC25A15 AHSA1 DIS3L MRTO4 LHX6 NLE1 EEF1E1 IL17D ABCC4 NOC4L ZNF667 CD320 UTP15 PUS7 MMP16 UNG DCTPP1 TTYH2 HP OAF LYPD6 RRP15 HS3ST3A1 PUS1 HSPBAP1 USE1 DDX10 EMR2 TFB2M SLC29A4 CAMKMT ALG3 SORD DCAF4 ANO2 LOC645030 RPTOR KLRG2 OR7C1 TSFM LRRC61 NOP14 PCDHB18 MMP25 SCFD2 LOC100289019 CALML4 QTRT1 WDR4 WDR83 PRMT3 C5orf46 CDCA7L TAF4B HLF ICAM5 MNT LOC439962 SHISA9 VWA3B B3GNTL1 APOA4 CGREF1 PRAP1 DGKD FOXRED2 MBLAC2 LOC127841 ZNF549 MTERFD1 HDLBP ENDOU QSOX2 ITPR1 SIX3 GP2 PUS3 DPYSL5 WDR43 C21orf56 DPP7 DLL3 NOL6 UBE2CBP IMP5 LOC653605 C20orf27 OR10H1 ABCC6P2 LELP1 MTFP1 TMEM132B LAS1L IPO4 PPRC1 SLMO1 ISOC2 ESF1 HSPE1 NIP7 NR2C2AP AMPD2 TRNAU1AP CCDC124 CAPS REPIN1 EXOSC9 PUS7L MON1A HSAJ2425 RPUSD4 C1QTNF9B-AS1 ZNF420 NEFH TRMT1
SRC_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/SRC_UP.V1_DN PLAT UTS2R UHRF1 LOC645238 LFNG MMP1 PIK3C2B NOL12 C10orf10 SLC2A6 WT1-AS TGM5 GJB6 MMP10 ZBED2 PPIL1 IRAK2 RAP1A CLCA4 EIF3CL NFKBIE ADA S100A9 LOC643650 LYPD3 MEGF6 ARSJ MCM5 GTF2H2 PLK4 COBL NID2 NYNRIN C17orf64 PRR19 CERKL LIG1 C4orf49 TMOD1 ACSL4 IL7R GDPD3 IFI6 ZNF721 PC SOAT1 ABHD3 KCNMB3 ACTL6A ADH4 C11orf72 CXCL5 LOC90784 ZNF135 LOC644337 FTSJD1 TRIM73 MON1A LOC647589 SLC7A14 CENPH DPYD CAPN12 ARRDC3 HOXB2 MYSM1 GINS1 SPNS3 RTN4IP1 POLR1A PCDH19 RARA NRP1 CTDP1 GRID1 LOC642771 IFITM10 GALNTL6 IVL CHAC2 ZNF782 KIAA1659 B3GNT3 ATAD2 CDCA7 EREG EMR1 FAM173B ZNF451 LOC644295 MAP3K6 E2F8 ZNF3 DGCR11 TMCO2 IRGC SERPINB2 MCM4 APITD1 EMB PTBP2 FAM153A CSAD DTWD1 SYT1 SUV39H2 FANCL S1PR3 SH3TC2 COL8A1 C8B DISP2 GFRA3 PRSS33 C9orf41 CA7 RNF220 NPY5R ZNF436 COQ4 TREML1 MN1 PHLDA2 PCDHB4 STK17B CWH43 SPRR1B HS3ST3A1 RCBTB2 MCM3 RACGAP1 KIAA1841 C14orf142 LOC554174 LOC285181 UNC119 PAK3 SEMA6B ARL15 TTC14 WASH3P IFIT1 DCAF17 ZNF628 COMMD9 ANO7 C1orf159 RAB33B CPPED1 NBEAL1 KIAA0754 MIR17HG PKP2 STARD3 PIK3C2G MMP3 RRN3 POP1 CARD16 GPR110 CDK11B IRX5 DISC1 SLC12A5 SPDYE1 OTUD6B ZNF789 RNF168 SNX32 ST8SIA2 FRMD4B PTGER4 RFTN1 LOC401131 SCRN2 NLRP8 EZH2 SYT15 TMEM14A
SRC_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/SRC_UP.V1_UP FOS TMEFF2 TONSL SRC SH3BGR LOC644951 FMN2 IMP5 CLDN9 NUDT4P1 DUOXA2 LOC653605 AGPAT3 TOX3 ATP6V1E1 CEACAM19 LINC00112 C9orf37 C1orf222 NYX LOC100288594 COL4A4 HSAJ2425 MATK CCDC19 GINS2 KCNQ1DN MTMR9LP LAMP3 FGF23 RPRM WTIP LOC254896 LOC100506127 SLC26A1 C1orf148 VPS37D PDZD7 LGI4 ITGB1BP3 PRADC1 SLC35F4 MAMDC4 FUT5 LOC283854 ETV7 SMO NAT8L SRMS LOC642926 LYZL4 PRR3 PCP4 KCNH3 HPX MORN3 BRWD1-IT2 MLXIPL MRPS34 TM4SF5 DYRK4 DTX2 RNASE1 ICAM5 C2orf73 FOXO4 ACY3 MIOX QPCTL LOC651803 FAM70B BAHD1 A1BG-AS1 CCDC23 VN1R2 IRF8 ATOX1 PIN1 SYN1 GALK1 TMEM88 GPX5 PI16 SLC4A9 LOC283475 CCDC65 CAPS SLC25A22 TFR2 FES COX4I2 FAM182B STAC3 MGC39584 MGC11082 NKX6-3 GRWD1 C19orf73 CPLX2 APOA5 LELP1 MBD3L1 MED10 FNDC8 POU3F2 CLIP3 TMEM11 FBLN2 LOC126536 FNDC4 HDLBP TMUB1 AAAS MMP16 EMID2 SOCS1 DNAJC22 PRPS1L1 VWA3B GP2 TRIM15 DCLRE1A FBXO44 SLC22A6 ABTB1 BCRP3 TTC21A FLJ44054 NPC1L1 ANGPTL6 AIM2 TTC25 CRTAC1 BMF STAB2 BCL2 OR1F1 DLL3 OPRL1 TMSB4Y GPR55 CDRT15 SCARF2 MAPK8IP2 NEU1 ASPSCR1 C7orf10 SULT4A1 RFXANK PIK3R5 TMEM106C LPO LOC283194 LOC127841 CD70 GPR15 FAM123B ATP8A2 C10orf92 ESR2 LAMC3 NAALADL1 PPP1R3B RAB3A PACSIN3 ACAP1 UBIAD1 APBA1 IGFALS TCEAL3 LYVE1 LOC100289650 APC2 CHCHD10 HMX1 AADAC RARRES3 LEKR1 CALML5 TAF3 LCE3D PFKFB1 SLC25A23 TECTA SEC11C CABP2 SMTNL1 YIF1B
SNF5_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/SNF5_DN.V1_DN MMP13 CD99L2 SMARCB1 XIST TFPI2 FOXG1 ANGPTL4 PRSS12 TINAGL1 TPD52L1 MST4 HOXA5 RGS5 KRT18 NPR3 ITGA3 DSP ANK3 CP MAPK13 PRKG2 ANXA8 PKP2 MS4A4D ENO3 OLR1 KIRREL LOC100129361 RBP4 SNCA ACYP2 SYTL2 FAH PDLIM5 P2RX5 FABP4 RFX3 MYLK VNN1 SLCO3A1 NNMT BEX1 CHRNB1 CARD10 DES MGST2 SLC9A3R2 HOXB9 SLC44A4 MMP10 GABRB1 SLC1A6 MMP3 SERPINA3 CLCA1 TMEM176B RNF128 RAPGEF3 ANKRD1 PPBP SPEG TMEM176A EFEMP1 SLC38A10 CCR7 FOLR4 FADS3 CDKN2A EBF2 SH3RF1 LOXL4 PAPPA GRIA3 STMN4 LY75 EFNA3 DPEP1 C8orf4 CHODL MYH3 IL13RA2 FLT4 RPS6KA2 KNG1 D4S234E ATP9A CDH10 LMOD1 DNAJA4 TET1 RGNEF ATP8A2 OTUD7A IRS4 RAG2 LTB4R2 PRKAR1B DIO2 CCDC109B PDZK1 IL11 PCOLCE2 TMEM53 GATAD2A RGS16 SIM2 ESR1 MRVI1 PTPRVP FGF13 BNC1 RIMKLB ITGA7 FLYWCH2 IL3RA RCAN2 GDNF CYP7B1 CTSJ FRZB TRAPPC6A DNASE2 NPR1 ABCA4 C1QTNF1 PTPRZ1 RAB3GAP2 YIPF2 CRCT1 WFIKKN1 IVL CRMP1 RABEPK RRAD TNFRSF21 GPX3 CELF4 CTH HSD17B7 KRT27 CBR3 SLC16A3 TRO CLEC1B FBLIM1 KLK11 PANX1 PKP1 TNNT2 NIPAL2 UCHL1 DSG2 MALAT1 FOXD1 KCNAB1 SLC30A4 CNTN1 PTPRK PIP STAR CSGALNACT1 CACNB4 NFKBIZ DDOST
SNF5_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/SNF5_DN.V1_UP GBP1 FABP7 SOSTDC1 GALC C1QTNF3 FCGR1A APOE APOD AGTR2 MS4A6D LHX2 LY86 CD68 MYH1 PENK OASL GABRQ C3AR1 DDX3Y SFRP2 PSMD8 DLK1 MS4A4C PSMB8 ID2 GAS1 AIF1 CD109 LSM2 CFP FMOD NCAN VAMP5 CXCL10 C5orf28 PITPNB FAM105A CD48 CKAP2 CX3CR1 ZNFX1 MYH2 LILRB3 ITGB2 IFI44L CD9 LCP1 MT3 GOT1 GTF3A SLC6A6 OLIG1 ACTL6A KCNJ10 KIF20A PRKCDBP ASS1 C1S DHRS1 PLEK PLD4 TREX1 C13orf33 ERAP1 SCG2 ZWILCH FYB MCM5 FNDC1 SRPX TFAP2B FBLN1 DARS IL8 IER5L EVI2A DCAKD MKL1 SOX2 SELPLG ABI3BP SLC1A5 LGR5 ABHD14A KLHDC5 GRK6 DDX3X FGF18 MSX1 ENPP3 C1QC IARS CCL3 POFUT2 RNF13 PTPRC LMO2 TIPIN EGR2 FAM65B NCAPG2 ADI1 CD53 USP15 EGFL6 TF DENND4C NDE1 CDO1 INPP5B LGALS3BP TAP2 RCC1 SPI1 MLF2 SMAD2 FBXO6 AURKB IFIT2 C17orf49 PSMB9 EVL EMID2 RBL1 AQP5 UBE2C MMP14 TMEM106A KIAA1524 PLCE1 CD93 PNN PIGP C1R DTL CORO1C TAPBP C19orf48 COPS4 HAT1 ISG20 SEMA4D LRRC33 BUB1 TGFB3 PLD3 C14orf37 CXCR4 SLC2A3 ZMYND19 MEST TERF1 CCDC132 STOML2 ANPEP FNBP1 LAMB2 PRPS1 CD52 CSF1R LIX1 RABAC1 COL15A1 LRP5 WAS PPP4C PRRX2 ATP1B1 MS4A6C GTF2A1 IFIT1 HAPLN2 ABCE1 EWSR1 FDPS PPIL2 ELN
CAMP_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CAMP_UP.V1_DN KBTBD11 SLC2A3 RRAD ETS2 RAB31 MAL2 HINT1 RWDD2B TSC22D1 DNAJA1 CHST15 ENO2 CELF2 USP36 ASAP2 MAP2 AK5 DST CCND2 CDCA7L TARBP1 SNN PLEK PAEP PFKFB4 PKIA AKAP12 LRRFIP1 LTA JARID2 NUDT11 ATP2B4 GEM THSD7A TTYH3 KLHDC4 INSIG1 BACE1 TIMP2 HSPA8 TANC2 PAK3 DYNLL1 FSTL1 ITSN1 CLK1 AKT3 FRY MYO5B NCF2 RAP2A FUT8 UBE2QL1 ME1 BIRC3 CCR9 MPZL3 CHST2 SMARCC1 MBD2 TUBA4A TRPC1 KCNN4 MYH10 PHLDB1 BCL2L13 ATP9A ID2 EIF4B NFKB1 ARHGEF12 TMSB4X FAM189B BZW1 PALLD RNF138 MIR155HG TMEM98 MTMR9 NPEPPS SEPT7 SYT11 UBE2E2 SERINC1 GLO1 RALGAPA1 DPYSL3 UBTF EIF4E RERE DLG5 PCLO SRRM1 ZCCHC14 OAT ANKRD6 NFATC2 SLC15A2 PES1 UNC79 IL4R ACAT2 NDRG4 SH3PXD2A NYNRIN MAP4K4 NTM PINK1 NDRG1 PGBD3 CD83 P2RY10 SYPL1 DGCR5 RGS18 RGS1 TUBB3 TJP1 SPOCK2 NAP1L1 ABLIM1 IDS ARHGAP5 MYO15B TSPAN5 LOC338799 EPB41L3 SCG5 HSP90AA1 SRSF2 MFN1 DCAF6 IGFBP5 BACH2 TLN2 SNRPA ATL1 SLC35E2 PLS3 GNG12 SLC17A7 FOXN3 SLC13A4 MAPK1 BSN EZR SVEP1 ESYT1 DAG1 GAL3ST3 ZFP36 CALM1 IL7R PAM ROD1 RPL7 ATP2B1 BAG6 NAP1L2 GLS HENMT1 MED4 LMBR1 FAM134C UBTD2 CASP7 DEDD2 PRDM8 USP38 ZMIZ1 CAPN12 ITPA CAMK2D IQCK TUBB4B PRDM1 FOSB PTPRC ST13 SERPINB2 LOC100216479 STXBP1 ANXA1 PCYOX1L GNAQ CD160 SEPT11 BCR ERC2 TUBB2B ATP8A1 RASD2 DDAH1 TMEM97 HSPA1A MS4A6A SEL1L3 PTPRD TMBIM1 PELI1
CAMP_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CAMP_UP.V1_UP NUAK2 SESN2 RNF41 HMGB2 MTHFD2 IFRD1 LETMD1 ATF4 BLCAP IFIT2 RUVBL1 AARS HSPA5 CEBPG RCHY1 SPOP XIST GMPPA SLC22A17 IL8 PLCH1 SEC13 SDAD1 UFM1 FP588 ETV5 WIPI1 SCARB1 NDUFS2 LONP1 PPIB CHST5 CD74 UPP1 ARF1 PRMT1 C21orf33 ATXN7L3B SIL1 NDRG2 COPE KIAA0040 SLC25A11 WBP1 HLA-DRB5 TYMP ATP1A1 COX8A CYBA NDUFV1 ACO2 CNDP2 TMED9 MARS CLOCK COPZ1 IFITM1 PDIA3 PA2G4 MAD2L1 ANKRA2 RPN1 ATP5B DAP3 MRPS18A PPP1R15A SELS ATP5G2 PEX12 KIAA0141 STRADA OXA1L PMAIP1 NQO2 FAHD2A CCDC124 SEC61A1 KIAA1267 HNRNPU CKMT1A STAT4 BSCL2 C14orf159 IFITM3 TRIM38 POLR3H WASH3P NSUN3 GPR160 TGFBI ZDHHC23 PXK ZBED5 ECSIT ZNF367 WAPAL METTL17 P4HB GAS5 GLRX WDR24 CHAF1A HAX1 AAAS AHCYL1 LOC595101 TOMM40L SMYD5 CEP250 AZIN1 TMEM116 NDEL1 C1orf123 ANKHD1-EIF4EBP3 PRIM1 ILF2 CCL5 LIMS1 CLPTM1 AKAP6 MDH2 VAMP4 IST1 RHOT2 LRR1 MAGED1 MRRF CPEB4 DPM2 SRPK1 TFPI2 KIAA1310 ALDOA WWP1 NRSN2 PCMTD1 SNW1 FLOT1 KAT5 CS MIDN NT5DC1 ZNF385A EARS2 TNIK HSPBP1 ATP5A1 TRMT61A APOBEC3C HSP90B1 TMEM9 PIGS SAT2 MT2A HSPA9 TAF1D DPAGT1 NME1 PDE4DIP MAEA HDLBP DIP2B MAGOH DDX23 C11orf71 MRPL15 CRABP1 TBC1D15 PLSCR1 CEP41 NFX1 NDUFB5 SELENBP1 SLC35A4 ALAS1 COG6 COL6A3 NLRP1 SSR3 FBXO42 ELN RABGGTA KRTAP4-7 AATF MYC URM1 PYCR2 IPO4 IVNS1ABP RPL18A TRIM2 RAPGEF2 FTSJD2 FOS SLC25A5 RBCK1 EIF2B3 ACSL4 ELMO1 OCIAD1
LTE2_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/LTE2_UP.V1_DN NPY1R IFIT1 IFI27 BST2 SLC6A14 IFI6 IFI44 IFIH1 LGALS1 DDX58 IFI44L GREB1 HERC6 IRF7 OAS1 FHL2 OAS3 DDX60 GPER PARP12 TFPI2 SP110 UBE2L6 WISP2 IFIT5 IRF9 IFITM1 CRABP1 GFRA1 IFI35 ISG15 ADD3 SP100 CAV1 TRIM14 LGALS3BP ASCL1 MDK MICB TDRD7 ZNF107 OAS2 COL9A3 PMAIP1 PSMB9 DLC1 IGF1R JAK2 ATF3 SOX3 CASP8 USP18 NMI TAP1 HIST1H3H GRB10 CCDC165 GCA PDZK1 TFAP2A SAMHD1 PRSS23 XK C9orf95 CSTA CALB2 PPM1E CALCR IFIT3 SLC16A1 OASL SATB2 SAMD9 MGP C16orf45 GAL CHN1 HIST1H4H LPGAT1 ELOVL2 WIPF1 USP25 IGSF1 IFRD1 DTNA EIF2AK2 CEBPG HERC5 MOCOS ELF4 PDLIM3 LTN1 PTBP2 PRKAR2B ANXA3 MPHOSPH8 ID1 BHLHE41 DNAJB14 ZNF43 PCSK6 IL24 NAV2 INPP5F PTGES UGCG FTO SLC7A11 SLC24A3 ZNF140 UTP14A ZNF84 SLC1A1 POT1 NCBP1 SVIL HES1 PTER TM4SF1 PLCB1 BCL2L11 MATN2 BTG3 ARHGAP12 BCL2 CDK8 NRP1 HIST1H2AC RPS6KA3 PLSCR1 TAF12 ODZ3 AGTR1 HIST1H2BG POLI RNF6 GEM STC2 AMIGO2 LGR4 ALG13 N4BP2L2 MST4 PHF11 NRIP1 CA12 PSPC1 CBLL1 CNN2 CBFA2T3 JAG1 NUP160 C18orf8 KAZN GART ZNF268 ATP8A2 EPB41L2 AMMECR1 EGR3 FKTN EFEMP1 DUSP2 PEG10 NFIL3 NCOR2 TSPO RIF1 JMJD1C RRN3 RHOBTB3 PSAT1 GADD45A SYTL2 HIST1H2AG NOTCH1 SLC16A7 HSPA13 CSTF2T LAMA3 LAMP3 ARMCX5 CAP2 KLF4 MTMR6 PTPRK DSCAM NUPL1 CHD1 RFWD3 MYO10 RAB31 NIP7 GTF2I ZMYM2 ZNF273
LTE2_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/LTE2_UP.V1_UP TNFRSF11B CEACAM6 GALNT12 GAGE3 GAGE7 SGPP1 VTCN1 AOX1 SERPINA1 FGFR4 ELF5 C10orf116 EPAS1 CHST11 RFTN1 MAOA TNNT1 EHF MGAT4A SDCBP EDN1 PGM1 BMP7 OPN3 PCP4 DRAM1 ATP6V0A4 FERMT2 ANKRD57 ASPH IL1R1 ABCC3 SEPT10 DAB2 RIN2 CLMN RAB40B NPC2 CYP1B1 KIN MARCKS SASH1 PLAGL1 SORL1 RCAN1 UST PIGH SOAT1 C6orf97 MBP ACOX1 MAP3K5 GOLM1 DUSP4 TFPT SLC9A6 ADORA1 ACTG2 KMO PPAP2C SLC26A2 CXCR4 CLIC3 QPRT ANXA6 RMND1 GGH KATNA1 UHRF1BP1L EPN3 BACE2 DIAPH2 ECI2 IGFBP5 PNRC1 PPP1R3C BNIP3L SLC2A10 LRP8 RHOQ C1orf115 RPS6KA5 GPX3 REEP1 RRAGD PLCB4 PCDH9 ENOSF1 PIP DHRS7 LMO4 PSTPIP2 UBE3B CREB3L2 PTOV1 FA2H MMP9 SERHL KIAA1199 CGRRF1 CYFIP2 TNS3 ORAI3 POLE2 FAM117A ABCG2 ATP6V1H TBC1D8 EPS8L1 ULBP2 KIF13B EHD3 ACOX2 INSIG2 GTDC1 PRPS1 GSTZ1 SECISBP2L ALDH4A1 GBAS RLN2 P4HA2 EFCAB11 TK1 APPL2 SLC12A2 ANKMY2 PROS1 SCARA3 EPHX1 PTGER4 AKAP12 DEGS1 CALML5 STAU2 UNC13B CDKN3 HSD17B14 MEIS2 RAB7L1 RAB4A SYT17 MICAL3 TMC6 GCNT1 LONP2 FBXL18 BTG1 SEC23A CSGALNACT1 P2RX4 PHACTR2 GLTP NUDT4 SORD DPYSL2 UROS PPFIA3 HRAS RAB27A SERHL2 PDE8A AQP3 PBK KLHDC2 FAM46C HMGCS1 DSC2 CEP76 PJA2 NOVA1 NUCB2 NUMB GNA14 MYO5A B4GALT5 NUP43 CD302 EPB41L1 ASRGL1 TIMM13 TST C4orf19 ALDH3B2 C15orf63 MRPL13 SPTLC2 HMGCS2 GCLM PRKCH
MEK_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/MEK_UP.V1_DN NPY1R PDZK1 IFIT1 MGP GREB1 GFRA1 TM4SF1 IFI27 HSPB8 KCTD3 DDX58 HIST1H2AC BST2 DLC1 SLC6A14 RHOBTB3 PRKAR2B UBE2L6 IFI44 EGR3 IFI6 MYB SLC26A2 IFIH1 LRIG1 SP110 IFI44L SGCG RPRD1A HERC6 MSMB ID2 AUTS2 GPER OAS1 DDX60 KIAA1324 KIF5C HIST1H1C BCL2 HIST1H3H HIST1H2BG IRF7 SATB2 WISP2 ASS1 ARMCX1 USP18 APBB2 FTO ARMCX3 OAS3 MYLK ISG15 C9orf95 AGL HIST1H2BH ZNF107 STXBP3 MOCOS C9orf3 TFPI MYBL1 UBA3 SSFA2 IFIT5 KIAA1598 TCN1 SMPDL3A POLI NRIP1 PRPF38B AK4P3 MYC PTBP2 ABCA12 HIST1H2BE FAM91A2 ATF1 FASTKD1 GOLGA8A ABLIM1 C16orf45 IFI35 QPRT SMAD7 ANXA9 HIST1H4H RMND1 TTC39A AMIGO2 C18orf8 MPDZ ASCL1 CYP26B1 OAS2 IGF1R SNX10 NOL8 S100A8 ZNF140 JAK2 SYCP2 CSTA OXSM IRF9 IFITM1 SLC35A5 RNF43 PDCD4 PMS1 SEC24D MTIF2 CALB2 ALG13 PTER ELOVL6 ELOVL5 PSPH TDRD7 SLC16A6 CHN1 RAB7L1 HSPA4L GOLGA4 INPP5F GNL2 C5orf13 F12 LIN7C ARMCX5 ZNF652 LSM7 DCAF6 CBR4 HIRA BAZ2B IFT57 TOP2B HIST1H2AG MAFB RASGRP1 TFPI2 PLBD1 ZBTB10 ZNF84 MOCS2 LTN1 NGLY1 KIAA0430 HIST1H2BI SLMO2 BLNK ATF3 CCDC165 ATP8B1 RPL29P31 ACTR6 SP100 PCP4 CASP8 RSBN1 LPGAT1 METTL3 ZNF43 IAPP INPP4B POT1 RALGAPA1 UTP14A INSIG2 CALCR OASL PGR MINPP1 SAMHD1 TAF2 JMJD1C ANGEL2 GALC CETN3 MAN1A2 AQR COL9A3 HIST1H2AE TCF12 WIPF1 TAP1 TRIM14 HIST1H2BF SOX3 PRMT3 NPEPPS FKTN GDAP1 NDUFAF1
MEK_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/MEK_UP.V1_UP CYP1A1 CEACAM5 AKR1B10 FAM105A KIAA1199 COL5A2 SGPP1 ALDH1A3 CYP1B1 UPK3B S100A6 UPK2 MEF2C EPAS1 CEACAM6 ALDH3A1 FGFR3 S100P CLMN ASPH PTGER4 DUSP4 SLC2A10 CXADR TNFRSF21 PPARG LHFP LOXL1 BACE2 GALNT12 KRT81 PKIA TGFBI EGLN3 PPAP2A EPHA2 TBC1D8 OPN3 ATXN1 LPHN2 GABBR2 PDK4 CAPN2 ENO2 ST13 PTPRE SH3GLB2 LRP8 IGF2BP2 FADS2 KRT7 PTMS CXCR4 ABCC4 CADPS2 AQP3 AKR1C3 DBNDD2 SLC6A6 GNE ARHGDIB LIMCH1 MALL CCNJL WNT11 TTC9 C1orf106 MYO1D SLC9A6 SPTBN2 RAI2 TNS3 LRP5 TMPRSS4 SGCE CSGALNACT1 F2RL1 GRAMD3 CLDN9 MAP3K9 SLC12A2 SDCBP ABCG1 SCCPDH SORL1 SLC2A6 GPX3 CBLB TNFRSF11B MAN1A1 BCAM FERMT2 ABCC3 FOSL1 MAOA ALDH4A1 COTL1 B3GNT3 MPZL2 ETV5 TIMP2 RAI14 CAPN5 AKR1C2 NPC2 TRIM29 NT5DC2 PCDH1 EPHX1 BCL3 ITGB4 BMP7 EDN1 TUBB2A PCDH9 GOLM1 SIX2 PACS1 ACSL1 RAB5C PDLIM7 GDF15 ST6GALNAC2 PTPRU CRLF1 FGB RAB8B EPHA1 LAMC1 CORO1A NT5C2 DBNDD1 GPX2 C1orf115 GCNT1 CHKA CAMK2N1 PACSIN3 KLF4 VASP ARL4C ELL2 ANGPTL4 FLVCR2 IL4R PTK7 CDC42BPB SAMD4A PEG10 SLC7A11 TNFAIP8 APOD PRKCH UPK1A AGAP1 RFTN1 TGFB1I1 CUEDC1 KAL1 MYO5A C11orf95 EFHD2 CRAT PARM1 L1CAM NUMB EHBP1L1 TP53I11 NEDD9 ERO1L ADM ULBP2 GUCY1B3 ST3GAL4 FHL1 MXRA7 NME4 SPTLC2 SPAG1 PPP1R13B GAL STRN4 KCNN4 VWA1 C8orf55 MICAL2 KIAA0317 LGALSL PTOV1 SEPT10 POR CLDN4 PLAU ARRB1 CHST11 SCAMP4
RAF_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RAF_UP.V1_DN CXCR7 BAG3 NPY1R PDZK1 DKK1 GFRA1 SH3BGRL ID2 GREB1 AGR2 LRIG1 PMP22 CCND1 SELENBP1 IRS1 TFF1 LPGAT1 SLC7A2 DLC1 MGP EGR3 SCUBE2 MSMB TSPAN3 SLC6A14 ENAH TM4SF1 B3GALNT1 SGCG MICB AUTS2 AIM1 C6orf97 CA12 MDK TFF3 TFPI CLIC3 INPP4B WASF3 GPR56 SIDT1 DNAJC12 IRX5 ALCAM GPER INPP5F PXDN CPE ABAT BCL2 PDGFRL SYTL2 ZHX2 APBB2 MYB GALC C9orf3 PLK2 HSPB8 KITLG NEDD4L IGFBP5 BTG3 CRABP1 C9orf91 IGFBP2 BTBD3 GULP1 IGF1R MYO10 TBC1D16 SLC19A2 CBFA2T3 MPDZ WISP2 MYBL1 ABCA12 AK4P3 KIAA1324 TCF12 AK4 CALB2 MED13L TTC39A SERPINA3 CAV1 HDGFRP3 IGFBP4 JAK2 S100A14 CCDC22 C16orf45 SATB2 RND3 MYLK ZBTB10 HIST1H4H SMAD7 OSR2 ID1 MXI1 MEGF9 ASCL1 CTNNAL1 PPP1R3C IFT57 PLCB4 MAFB TCN1 MYO1B ABLIM1 BAMBI SLC24A3 SLC39A8 TRPS1 PDCD4 CCDC6 PKP4 PCSK6 CSTA ROBO1 SNAP23 CSTF2T SLC1A1 DLG5 PLS1 ELOVL2 TMPRSS3 TSC22D3 CALCR GDAP1 TGIF2 RHOBTB3 GPATCH2 EFNB2 SLC16A1 VAV3 ARMC9 GTF2I RASGRP1 SHQ1 ARL3 PDK3 CELSR2 C12orf24 FTO ARNT2 LIN7C PPM1E CRNKL1 PCGF3 UGDH SHROOM2 SOX3 PGR PLCB1 GPC4 DDIT4 COL9A3 EPB41L2 TBC1D30 GHR EIF2S3 KIAA1467 IL24 SOX4 PALLD ZNF32 SPIN1 PMAIP1 MINPP1 JMJD1C FRAT2 SOX9 CHST15 PTBP2 FANCF GPD2 KYNU GAPVD1 STC2 CASK KDM6A THADA FOS DIDO1 RRN3 TFAP2A FTSJ1 SDC2 EPB41L4B TGFB2 OSTM1
RAF_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RAF_UP.V1_UP ENPEP S100A9 VGLL1 HSD3B1 PPARG CSGALNACT1 C8orf4 TSPAN12 SGCE BLNK EPAS1 CAPN6 HPGD ANKRD6 MYCL1 PYGL NFE2L3 GPR37 SERPINI1 GRAMD3 GLRX XYLT1 KCTD12 COTL1 ALPP CGA TNFAIP8 FYN HBEGF GNAI1 ITGA6 OPN3 LEPREL1 STS CLDN1 SGPP1 NMU RSAD2 C4orf19 MICAL2 KLF6 UGT8 OSBPL1A C6orf145 C1GALT1 TEAD1 FCHSD2 OPTN CDC42EP3 S100P ARHGEF3 TFPI2 ALAS1 TNNT1 VTN PHYH GJA5 KHDRBS3 ERVMER34-1 S100A8 RASL11B BACE2 BPGM CAPN2 TNFRSF21 FAM49A UPK2 KLHL7 CYP1B1 PKD2 PTGER4 ITGB6 PARVA TUBB2A GNE SEPT10 ASPH KAT2B MSX2 HERC5 SPRR3 CABYR CERK JAM2 TLE2 CD44 LRP5 NUAK1 SLC31A2 VTCN1 CRISPLD2 EGFR MAN1A1 GM2A PDE4D UPP1 QPCT RNF144A DSC2 PEG10 LAIR2 MPZL2 LAMC1 L1CAM ANKMY2 MTMR11 CORO1A PGM1 LOC401034 KCNN4 ACOX1 PTPLA DUSP4 NAV2 ABCC4 FGF1 HEG1 CEBPD ETV5 PSMB9 GABBR2 NMI MAP3K5 PER3 ACSL4 CCR1 AAK1 TMSB15B FERMT2 NR4A3 ABCC3 NPL TBC1D2 PTER CDK18 TBC1D8 PLS3 RCAN1 SEPT6 B3GNT3 GATA2 ANGPTL4 ACYP1 GALNT12 FAM59A CREB3L2 MALT1 NDC80 FBXO3 SYNE2 IMPA2 SAT1 SKAP2 GRB10 SMAGP DBNDD2 LOC653127 ERAP1 ZNF331 SCG2 NTAN1 CLMN PTMS HSPA2 FAM13A SDCBP ME2 DHTKD1 SLC2A6 NPC2 SCARA3 PSMB10 CRIM1 MTMR2 CEP70 DHRS7 SOCS2 ACSL1 HSD17B11 ABHD6 CAST NMT2 RRAS2 FZD5 MORC4 SCCPDH CAMK2N1 CAPRIN2 MAPRE2 PRPS1 NEDD4 TBC1D2B ARHGAP26 TES GCLM PRKCH
PRC1_BMI_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PRC1_BMI_UP.V1_DN PMEPA1 DNAJC12 MTMR8 OSGIN1 RIPK4 LOC643326 KIAA0319L CD5L SLPI CDADC1 C1orf95 MYL3 LOC284244 CCNT1 CACNA2D3 DKFZP434C153 XPNPEP2 CLCA1 PRND PELI1 IRF8 HSPB7 BHMT2 SERPINA3 GMIP BIRC3 ANKRD2 CLDN16 AGAP2 EGR2 GUCY1A3 RGS6 AZU1 NR0B2 LUZP4 GAD2 AOC4 COL10A1 PCDHB12 SLCO4A1 EYA3 AMMECR1 CYP2B6 SH2D2A ERMAP ANKRD46 AATK PSG7 USP46 COLEC11 KRI1 CXCL10 ARHGEF38 MYT1 NXF2 IDO1 FGF12 LOC390940 TLE2 LIME1 IL8 ATP1B2 CCL18 C14orf56 GNG3 MADCAM1 MCTP1 DCP2 NEUROD6 OPA3 GATA1 CDH22 NIN DKK2 PLEK2 SPON1 FOXP1 RBM4 ACE CNGA1 GRM2 RGS16 ARL4C NEIL1 PDE6A DYM TNN MAFK SOHLH2 CCND2 LOC155060 PADI4 FAM76A SSTR4 FCHO1 SLC19A2 SLC1A2 ANGPTL3 EHHADH SRY ACTL8 NUPL1 PLEKHF1 S100P CLEC4E NR1I2 PTPN7 SLC6A15 CDK6 TSPAN7 TMEM187 FPR3 ERAP2 ZNF117 MDFI ADCY8 GRIN2C HIST1H3I PAIP2B LRRC8B DPEP1 DMD ZNF91 TNNI3K ZSWIM1 CLDN3 GALNT3 EIF2C4 PTCH2 TNFAIP3 KRT1 ZNF423 TOR1AIP2 TTLL4 PELI2 CHD7 GADD45G RIC3 GABRA4 CCR3 EDN1 HBA2 DEC1 SCTR ABCB4 PAX5 IKZF2 SDCCAG8 YBX2 SIM2 THNSL2 GNL3LP1 COL13A1 HIST1H3J FAM153A CCL8 RFPL2 C22orf46 MMP25 PAX6 LPAR3 ZBTB10 ADAP2 ZNF184 TYR LRRC31 KLHL1 HCAR3 IL5 TRPC6 DUSP2 KLHL28 CCBP2 TRABD PTGDS HIC2 HYAL3 FAM86C1 C7orf63 CDK17 DENND5B CD5 NTM FOXG1 EPS8L3 LOC100288594 SCGB2A2 KIF5A PGLYRP4 KIR2DL4 C3orf64 IGHV1-69
PRC1_BMI_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PRC1_BMI_UP.V1_UP BBC3 PADI1 RDH5 CNGB3 AIM1L CHM SOAT2 FNDC4 BMI1 GJC2 BARX1 ADAMTS7 DNMT3L ONECUT2 FABP2 PAGE4 LY6G6C APOBEC1 PTPRO ITGA7 HOXA10 DDX25 SDK2 HYAL1 PQLC3 AP1G2 CLSPN GABARAPL3 OPCML SLC16A10 PDGFB SLC27A3 CACNA2D2 C16orf3 TPSD1 SLC25A23 RNF2 CTAG2 HIST1H2BI LRRC36 FGA C1orf183 CYP27A1 SHANK1 HOXD11 EPHX2 GALK1 RBPJL PACSIN3 SERPINB3 ATP2A3 CRISP1 MLLT1 QPRT CYP2C19 FKBP5 C1QTNF9B-AS1 FBXO17 OXNAD1 EVPL PNPLA3 MPPED1 KCNF1 HAPLN2 ARSD TBXAS1 L2HGDH DPY19L4 APOBEC3F KIAA0368 CORO1A SERPINB10 LY6G6E GNA15 KCNJ4 TRPM4 C22orf31 RAD54L2 EFNA5 GLRA2 ANKS1B GNB1L RNF19A OVOL2 LIM2 PWWP2A LRRC37BP1 IFIT1 SLC9A3R2 PCDHA10 ZNRF4 CAND1 MIA NAT6 PILRA CALML5 NPFFR1 CHRNA3 PEAK1 CLDN14 RND2 CA5A DNAI1 NACAD FZD10 HHIPL2 TSPAN12 LRP12 USP46 FES AANAT SPTBN2 TNNT2 SNTG1 MLL2 MFSD6 IMPG2 PRSS8 FKBP6 RAPGEF5 LMOD1 PRRG2 DKFZP434L187 FLG GPR183 LAMC3 UPK1A ATP8A2 PSD4 NCR1 MYH13 CUL9 CIITA KIR2DL3 FOXJ1 LRRC37A4 SLC22A6 PROP1 SPINT1 FAM106A HCRTR2 PLXNB3 CALCA SV2B CYP3A7 GUSBP11 CLIC3 C1orf20 EDN2 PYCARD FLJ14327 MAPK3 PCK1 GVINP1 SYN3 STMN3 MTHFS PLA1A CXCR6 ZNF771 CABP2 HLA-DPB1 NXT2 DCC KCNC1 GFAP TM4SF20 SYN1 BPNT1 E2F5 PIK3C2G OR10H3 CARD14 KBTBD11 GAS1 MON1B LHX6 PLIN1 SERPINA7 ADCK4 FBXL8 T P2RX3 FGFR3 FN3K ZXDC LIPE APOA1 HCN4 CD207
PRC2_EDD_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PRC2_EDD_UP.V1_DN SERPINB2 HIST1H2BC DCP2 HIST1H2AC ANKRD46 HIST2H2BE PMEPA1 ANGPTL4 ZNF226 ARL4C ATXN1 C21orf7 TMEM187 N4BP2L2 AKR1B10 NUPL1 SLC6A15 HIST1H1C GALNT3 PLSCR4 PKD2L1 MAPK8IP3 GDF5 ATF3 SCG5 OBSCN GPR37 LY96 HDAC9 PCSK1N H2BFS SLC12A8 FPR3 PLAG1 ZBTB20 MCTP1 C2CD2 DNAJC12 SLC35D2 OSTM1 CCK AATK ERMAP C1orf63 KLHL28 ANXA10 HIST1H2BG MADCAM1 SMR3A NMT2 BTBD3 C10orf10 LOC643326 ST13 EVI5 SPON1 MYH1 HINFP DUSP8 CDADC1 BMP2K FUCA1 ADAM17 DMD PPM1H HOXC8 NR0B2 PTPN7 MTHFD2L GADD45G PDGFA LUZP4 ASCL3 HOXA2 CXCL10 ZHX3 TRIB1 SLMO2 CYP1A1 RPL3L KCNJ15 NXPH3 CUBN USP12 PTBP2 RNF38 ZNF277 LRCH4 GSC2 AKR1C3 CD5 CCDC87 C1orf21 CCND2 SLPI SLC30A10 TRPS1 TOR1AIP2 AFP PCBD1 CHST11 ORAI3 RFPL2 GATA1 AVL9 SATB1 CSHL1 MPDZ SCG2 DKFZP564C152 CA6 RABGAP1L MRS2 BAZ2B CBR4 TNFRSF11A ELF1 SLC28A1 ZNHIT2 PTGDS GPR116 NPVF CACNA2D3 ADRA1B IL1RL1 MS4A4A ASB4 RBM47 HIC2 HIVEP2 IL13RA2 DKK2 TAF11 CLIP1 PTPRT WDR33 SCN10A VTN FAM190B P2RX2 SERPINB7 LXN GSG1 CLCA1 CBX8 ZP4 ELTD1 KIF1B IFI6 ZNF91 MTSS1 SUV420H1 CTSO FAM129A CCL16 ZNF177 CDRT4 SLC5A5 RASL12 CORO2B TSPAN13 CLGN PDZRN4 KLK6 SERINC5 BACH1 CIDEA SEMA6D REV3L CDKN1C NKIRAS2 OSGIN1 GPC5 CDHR2 KCNQ2 ENPP2 ACAP1 GSTA3 FLJ11827 USP46 CNGA1 IRF8 PRSS12 NR3C2 TUFT1 RAB40B CD244 PCGF3 IL12A LINC00230A THNSL2 ARHGAP24 RGR SCTR
PRC2_EDD_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PRC2_EDD_UP.V1_UP QTRT1 FZD8 BBC3 PLA2G16 PFKFB4 HP1BP3 HELLS SLC2A6 BTBD2 NDRG4 CORO1A FBXO17 ABCB8 CSPG4 NYNRIN WFDC1 TNFRSF10D GSDMD AMDHD2 PACSIN3 SCD SYMPK JUP TMEM59L MICAL1 AZI1 PLK1 PCDHGA3 HS6ST1 SV2A CDCA8 CASKIN2 KIF4A RAD54L USP20 ERCC2 ODF2 ITPKB RAPGEF1 MCM2 MFHAS1 SIPA1 CDC45 EED C19orf21 DDX31 ARRB2 SEMA3B TNS4 FASN KCNS1 ACY1 AP1G2 LIN7A SLC35C2 RNF19A TOP3B DUSP7 ANKZF1 TAF1C C1orf112 GNAI2 XRCC3 ATP13A2 PRICKLE3 CHAF1B VAC14 PLXNB3 TSC2 PACS1 C16orf59 POLD1 RECQL4 PEAK1 MCOLN1 UTRN PRKACG ABCB9 PRMT7 TCIRG1 TBL3 OSGEPL1 MICALL2 FOSL2 MCM10 CLPB PCDHGC3 ACAA2 H1FX CXCL12 FER ZWILCH SERPINB10 INCENP DAK KCNA4 INHBB HIVEP3 FRS2 AFF3 TRPM4 GLE1 TCAP SLC26A1 CAD BCKDK TRMT2A STXBP2 PCDH12 CSDC2 ZNF446 ASF1B ARHGEF17 GALK1 SP1 CUL9 PTK2B MVD TGFBR1 CLSPN SYN1 PWP2 ZDHHC6 MIA PLXNB1 VARS LSS EHMT2 RDH5 MAP3K6 WIZ PNPLA3 PHKG2 CDK18 APLP1 FKBP5 TACC3 INSIG1 IDH2 RANGAP1 THRAP3 PDCD1LG2 TNIP1 GPR176 DLK2 DNAJB2 ARHGAP19 KIF23 RAD54L2 CA9 ALG12 POLA2 HIC1 NUP188 SLC9A3R2 GLI1 PTGER2 MCM5 FBXL6 MRAS ORC1 MYBL2 TM7SF4 TNK2 C1orf183 TUBGCP2 LRRC20 ENO2 KLK8 LMOD1 CHST3 DBF4B C22orf29 EXOSC2 HMOX1 TRIM46 FADS2 DCLRE1B RASSF1 CHM PC LIPE PDE4D TUT1 AIM1L BUB1B SURF2 SLC12A4 RIPK1 BTBD7 C16orf53 VAV2 MAPK7
PRC2_EZH2_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PRC2_EZH2_UP.V1_DN SLC6A15 NTSR1 CCDC68 C13orf15 PMEPA1 ANGPTL4 GPR37 ASPN ANKRD46 IL15RA NUPL1 ARL4C PKIA COL13A1 TSPAN13 KIAA0319L DNAJC12 IL6R ITGA2 KLF4 C3orf52 IL1RL1 YOD1 CLEC2B KCTD12 FLVCR2 ALDH1A3 HBEGF GPR56 EYA3 CNIH3 GPM6B C7orf43 SLC14A1 VWA5A OTUB2 TMEM35 SERPINB2 NR0B2 AMMECR1 RGS17 AATK ESM1 GFPT2 SETBP1 MALL DKK2 TSPAN7 PLCB1 RASL12 PCBP3 DUSP3 PAMR1 IL8 CD70 SLPI ETV1 BPGM NPAS2 KLF11 MCTP1 L1CAM PCDH9 CORO2B MTHFD2L C7orf63 AFP F2RL1 MAN2A1 SEMA3A ACTL8 ZNF215 OPN3 EDN1 SLC5A7 IFI44 IRF8 ETV4 TRIB1 CCNJL B3GALT4 TBXAS1 OSTM1 PRKG2 DCBLD2 TBC1D19 PPFIA4 PTBP2 MMP10 SRPX2 IL13RA2 CCK BMP2 FXYD6 PPP2R1B IDS IL33 DMD RGS16 KYNU TUBA4A PRSS3 EPHB2 ST6GAL1 YRDC KIR2DL4 CRCT1 COL4A5 TRAF3IP1 SLC16A8 HS3ST3A1 ATF6 SRD5A1 ORAI2 KCNA2 CCR3 OPA3 LOC155060 NES PAQR5 TMC7 CDCP1 APOF SLC35D2 DUSP8 FPR3 GMIP TNFAIP6 ERAP2 COL10A1 LUZP4 ATXN1 KLK7 CLEC4E PTHLH ANPEP CDADC1 EREG CROT MT4 PCTP KIAA0895 PIR KIAA0513 MTMR10 TTLL7 B4GALNT1 KLF13 KIAA1644 NR3C2 KCNJ10 OSGIN1 JUP FOLR3 NR4A2 ABLIM3 TUB HYAL3 SMPDL3A BHMT2 ACCN1 ALDH1A2 NPC1L1 UCP1 NOVA1 SLC19A2 MEGF9 WDR37 COLEC10 VSNL1 ANGPTL2 TMEM100 KCNA1 POPDC3 POMT2 ZNF324 ANKH PTPRB CDH13 ART3 SLC2A3 COL4A6 DKFZp566H0824 ELTD1 UBE2O FAM69A C9orf167 AHNAK2 CLIP1 PDGFA FZD1 CARD9 SCML1 PIK3CB
PRC2_EZH2_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PRC2_EZH2_UP.V1_UP INHBB DSCC1 NGF ZNF446 LIN7A XRCC3 PNOC APLP1 ATXN8OS CXCL12 PEAK1 CACNA2D2 MIS18BP1 THBS2 CORO1A OXTR C6orf25 PRIM1 HP1BP3 MCM2 RAD54L SCN3A HAUS5 NPR3 LRP12 ATP4B MYBL2 IL17RB TRPM4 KRT81 SYN1 LRRC32 MST1R EZH2 HOXA10 TBC1D2 VPS37B THOP1 PITX1 NFE2 KCNS1 EXOSC8 ZNF219 HOXD11 CD320 SLC7A2 LOC730101 SKP2 TPD52L1 HELLS KLHL11 SLC8A1 HMMR CHM LMOD1 NR6A1 TOX GNB1L LPGAT1 KIF15 CGA MRPS18B FOSL2 UTF1 PAN2 DEPDC5 SPAG11A FUT7 LMNB1 DNMT3L TNFSF11 GJC2 ZNF574 TFAM FOXN3 CNGB3 RPS6KA6 LINS SULF1 CUL9 CYB5B AFF3 LRRC61 IQCC SLC2A6 MSH5 GAGE3 DLGAP5 PLN CAMK4 MCM10 TM7SF4 PCYT1B AGTR1 KCND1 OXNAD1 GAS1 SLC16A10 CASC3 GLRA2 DPY19L4 LOC100288903 PSRC1 HBD DDB2 ADAMTS5 CDC25A LRRC20 METTL16 OIP5 NPAS1 MED18 WDR76 BARX1 MXD3 RFC4 IFIT1 PTGDS HCFC1R1 RNF19A PUS7 LBR CYP3A7 TACC3 DOC2B C3orf75 LEMD3 PLCD1 CDH17 C8orf51 DEF6 GTPBP4 NCAPH CENPF KIF4A ELL2 BCCIP ACTC1 GALR3 HAS2 CEBPE OCEL1 HIST1H3F NUP43 KNTC1 NLGN1 ECT2 TTK NFIB RDH5 AURKB PILRB SYP NUP37 CDT1 POLR3G FCN3 LOC282997 PCK2 OLFML2B MEFV FKBP6 PTPRD SYT11 GNA15 PRSS1 SOAT2 NMBR FKBP5 ATG16L1 ETS1 AIM1L ADCK4 HMOX1 CPEB1 PAGE4 DEPDC1 GRM4 MYT1L KCTD2 DNA2 EPHX2 BUB1 SIGLEC5 DDHD2 MST4 GUCY1A2 MLF1IP CDC45 PSPH HJURP INO80D MS4A12 LGALS7 KIAA0889
PRC2_SUZ12_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PRC2_SUZ12_UP.V1_DN KIAA0319L CDADC1 GGT5 DNAJC12 TOM1L2 LOC155060 RPL3L SCTR KRT81 PPIEL FOLR3 ACTA1 SLPI NGB SLC15A3 C1orf21 ERMAP CNPY4 VILL SETBP1 PMEPA1 MTMR10 FAM182B MCTP1 CACNA2D3 GRIN2C ALX4 ANKRD46 LIME1 FGF9 COL13A1 REST PCBP3 DCP2 SLC13A3 SPTB C10orf116 PCSK1N OPA3 OR7E47P BFSP1 ARL4C GMIP HBEGF LYPD1 KRT15 SPIB SEMA3E SMPD2 ACTL8 SRPK3 CCNT1 CLEC4E MYL3 DACH1 RBM4 PLEKHA5 MTRF1 CCNK ZNF76 EDN1 CAB39L ACE FCHO1 ERAP2 PRSS50 WDR25 LOC643326 COCH SLCO4A1 KRI1 CBX7 ACAP1 IL1RL2 USP46 CH25H DOK2 MRS2 CIDEA BRDT CA11 STAB2 ZNF471 AATK LCAT DYNC2LI1 GAB2 BMP3 FAT2 RNASEL ELANE XPNPEP2 AOC4 CCL18 DCBLD2 CCK HR C9orf5 CA6 LCP1 ANXA2P3 GAD2 OR7A10 CBL SERPINB2 ITGB1BP3 LOC646089 ERO1L ALDH1A3 PPFIA4 TAS2R13 MT4 PRKY PLEK2 SCG5 POMT2 ATXN1 FCN2 LOC390940 PRKG2 TRIM58 FGF6 KCNN4 ZNF208 TNFRSF1B LCE2B CCDC87 GATA1 CHST11 THNSL2 PTCD2 NUPL1 LOC147343 SLC39A2 POLM ZNF550 CYP1B1 SST MYT1 CBX8 ETV4 PAQR6 PDE6A SLC6A15 KCNJ15 NKX6-1 CD70 TRPC6 SLC6A9 CALML4 C2orf27A PKD2L1 STAT5A FMNL1 TMEM187 GUCY1A3 GIMAP4 UPK3B PTGIR PSMB8 CFB ECM2 ST18 GRP CXCR3 BTN3A2 EIF2C4 NEIL1 TET3 ALDH1A2 SERGEF POU2F1 ZRSR1 OTUB2 PPYR1 UCP1 HIGD1B ZNF324 OSTM1 ZNF177 CYP4F12 TRAF3IP1 GPC6 IFNA1 IGLL3P CTSS IPCEF1 KIAA1024 ITGA2 XK NR0B2
PRC2_SUZ12_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PRC2_SUZ12_UP.V1_UP SUZ12 LMOD1 CIB1 NDUFC1 TM7SF4 GLRA2 CXorf56 ARRB2 SOAT2 SLC4A8 TRAC ANK1 PAX1 HOXA10 PTGDS SLC16A10 BCL2L14 BBC3 HLA-DQA1 KBTBD11 CBFA2T3 AIM1L HYAL1 TCAP SLC35D1 TSPAN12 PNPLA3 SLC6A6 ATG2A HOXB1 CLEC10A WFDC1 AP1M2 MED20 FRMD8 HOXD11 APCS PYCRL PHOX2B TINAGL1 C6orf123 FGA FXYD1 ADRB3 C16orf3 EPPK1 CLDN14 PGAP1 EIF2C2 PKP1 CCNE1 POLA2 LMNB2 OR6A2 RPS6KA2 BPNT1 STAU2 NPY2R TACR1 IL23A SDCCAG3 T GP9 TNNT2 MYH13 RPL37A DLGAP1 CD247 ALDH3A1 PRO1880 PF4 ATG16L1 ARSD NPFFR1 HOXC5 CGA PARK2 IMPG2 KLHL11 PRSS8 LDB2 EFNA5 EPHX2 HS2ST1 ZNF696 ZNF695 RAD54L DEFB126 SLITRK3 LHX6 HAUS5 CD1B ACP5 AMBP DNAI1 KCNMB2 MARK1 CACNA2D2 KLHL23 NPY TM4SF20 PTPRO DCC MYF6 KAT8 RUNDC3A C8orf71 CACNG2 LRRC61 IL10RA RFX2 CCL19 ATP2A3 SRSF11 ROCK1 FKSG2 MAP2K4 C19orf50 NLGN1 SLC12A5 SRD5A2 FOXJ1 DFFB HAPLN2 ORC1 SHPRH CD1D RAVER2 OR52A1 ONECUT2 CHEK1 CRISP1 ZIC4 RECQL4 GNA15 AGER TTC18 LOC100288903 GUCY1B3 CHRNA6 ZWILCH MAP1LC3C SLC17A3 DRP2 ADCK4 ADCY2 SYN3 EVPL ARF1P1 KLF15 ACVRL1 ST3GAL1 MC5R OPCML IGKV3D-15 OR10J1 SLC7A6 NAA10 DCX CHN2 KALRN LPCAT1 C22orf31 MAPT WRN LILRA3 CORO1A PGK2 C12orf52 ALOXE3 TFEC USP2 BTBD7 SCHIP1 ARHGEF16 CA7 MEIS2 P2RY10 PTTG2 STXBP2 ADAMTS7 LRP5L FMO6P GNGT2 SERPINB4 UPK1A MYOM1 UBQLN3 C3orf75 KRT3 IGLL1 ATP2C2 CD22 IL1RN
JNK_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/JNK_DN.V1_DN MAFK MAT1A FLRT1 FAM182B TBKBP1 OPRK1 APOBEC3F SOX10 MCAT SVEP1 SERPINF2 MYL9 CHD1L RARA TRAF6 ADAM3A FABP6 RIMS1 PLCB1 GGCX DAAM2 CRX ARHGAP4 SLC6A5 DSCR4 TM4SF4 TULP1 MMP2 TTTY1 C10orf10 CCL11 CA5BP1 CAPN11 TNIK ABCA4 RCAN2 IRF2BP1 NRGN PIP VEGFC GIT2 ERVW-1 SMAD9 SMARCD3 KIR3DL3 ZRSR1 NDRG2 CRYM KIF22 HMGB3P30 CTRC NPY1R SPINK4 POLD1 UBE2C SLC14A2 CABP1 NPR1 C8orf71 UBL4A PDGFB FAM131B ACVRL1 SHB AR PLK1 RND1 ZCCHC14 IRGC NR2E1 LY86 SLC12A5 LRIG2 EPHB1 KNTC1 NFKBIL1 THY1 MIA SIPA1 ZNF549 KLHL35 TYMP POP1 PACRG BTK P2RX3 RAB11FIP3 MAP1B ANKRD1 IL2RB KAT5 SSX3 CDC45 EFNA5 MFSD7 PDE6H SLC2A2 CDC42EP2 GJA4 ARR3 DUSP8 WIPF1 ABP1 MLL FAM164A ETS1 EIF2C2 MBNL2 GRIN2C BCL9 FAM110B KCNV2 PCDH9 NOVA1 RGS14 PAQR4 ABHD2 GPR12 BCL2L11 SV2B SMAP1 TTLL3 PML GPR171 STK35 STON1 IDUA CYP1A1 LRP8 TRIM10 ASGR1 KCNA4 PCYT1B DENND5A SPRY1 SGCG ITGB2 DYRK3 DEFA3 IRF8 FBP2 FXYD2 DUSP4 NMB NELL2 ATP2A3 COL13A1 CRYBA1 QSOX1 INPPL1 GCNT1 CDKN3 YPEL1 PLCD1 RAB6B KPNA3 VASP NAT8 RGS16 JPH3 INS PFAS SEMA3B TSPAN2 ITGA10 PIM2 SYT17 G0S2 SMYD2 KCNJ8 TRO FER KRT75 OR7A5 BLM NRP2 APLP1 STEAP1 SERPING1 RAB40A GCGR SRC KIAA0889 XIST FASLG ZIC2 TENC1 PTPN18 LINC00342 HSD17B3 PTP4A3
JNK_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/JNK_DN.V1_UP CCL15 PMCH MYOM1 AGXT STC2 GPR37L1 DDIT3 SLC26A10 B3GALT5 IGFBP3 N4BP2L2 RUNX3 PDE4B OR2B6 LOC652068 UNG IL8 STARD13 HR CXCR7 CCL1 ZNF79 SLC7A7 DGCR9 APBA1 TRIM24 CLCN4 INPP5J HOXA4 RGL1 ANXA13 CTSZ HSD3B1 GNAZ KLK7 KCNJ9 KCND3 PPFIA4 GHRH KDM5C ZNF204P CBX4 PDE6A SCNN1B SLC34A1 C2orf55 YAP1 BMP7 HOXC4 ABCD1 CD83 HNF1B TNFSF14 F11 PTPRCAP ARMC8 PPP1R8 ADAM12 BAG2 IGLV6-57 PNOC CD37 SLC25A24 TNNT2 ALOX12B LOC646621 SHC3 FAM161A CACNA1H MED13 TET3 ADAMTS3 EFHD1 CACNB2 CGA PRRG2 RRAD EPAG TEK CLDN18 SNAI2 RNF8 PTPN22 IL12RB1 NOX1 HIST1H2AM MAN2A2 TACR1 SCN2B CCL4 CEACAM4 TGM1 SLC25A20 HTR6 NID2 KIAA0368 GPR45 RUNX2 PECAM1 FAM65B HSPA12A MDM2 GCH1 AGRP GABRR2 TFEC AKR1B10 PHKG1 RASSF8 IL13RA2 ECM2 TBX2 IFNA2 PMEL HOXA2 C8G RAD17 SLCO2B1 BMX HIST1H1E UGT2B15 DEFA4 DGKQ KCNJ5 GPR31 CCL22 KCNS1 PIP4K2A OR2J2 IL10RA RAB35 TDO2 CRMP1 C1orf144 TRIM31 BIRC3 EPM2A SERPINB3 SLC6A1 SKAP1 SLC16A2 KRT34 AGTPBP1 MAP7 GPX7 PLAA ABL2 C1S PDK3 KRT37 KCNN3 TSN HIST1H2AK SYNE1 EYA2 TNNC1 ACADL UHRF2 RASSF2 ARL4A DRD1 ELN MRAS ERVK-6 TNFSF4 PRR3 EFHA1 SLC22A5 EPHA3 BEAN1 MVD PAPSS2 HIST1H2BN MMP17 ZFHX2 ARSF LOC339290 MPL SPICE1 FOXA2 MS4A1 GABRP CLIP3 CXCL11 AKR1C3 EPHA4 ROCK1 NLE1 S1PR1 KRT9 ZNF280B PROZ
BRCA1_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/BRCA1_DN.V1_DN GM2A DPYSL3 GSDMD BRCA1 NDOR1 ZNF32 C1orf159 ZRSR1 RAB40C RAPGEF1 TCF7L1 VAMP3 MSH5 GATAD2A LYVE1 CDK11A PDLIM3 INSR CCDC132 LYL1 GREB1L INPP5J RBP4 SLC5A2 ATP4A AURKC SCARF1 KCNQ2 CDC42EP2 CARD10 PTH2R SLC5A1 OLFML2B PCDHGB6 NPFFR1 SPG21 GDF5 ARF1P1 FAM75A1 HSD11B2 DPY19L1P1 OR7A10 RSAD2 BMPR1B CD80 GNRH2 GPR35 NYX SMO HIST1H4B C14orf93 CYSLTR1 COLQ SUSD5 CNIH4 E2F2 NRGN CD79A SNAI1 TMPRSS11D HIST1H4E EXD3 MLL2 ICMT PLBD1 CYSLTR2 IFI35 ZNF668 CYTH3 ICAM4 ITGB1BP2 CTSW C21orf96 XCL1 GPT IL19 PMCH WDR60 EPB41L5 GPR157 MX2 GRIP1 HMGB3P30 KIAA1310 PLEKHO1 ERO1LB LRRC17 CHD2 AMBN GABRB3 ASPA TMEM143 HHAT PCDHB1 PRSS2 PPP1R9A PROX1 FGF9 GNA12 ZBTB44 STX10 TRAF3 ZNF253 WFDC1 FAM57A PTCD2 LINC00338 MEOX2 ITIH3 ZMYND10 PNMA3 MC4R CTDSP1 MS4A5 SPHK2 APOA4 AIM1L SCNN1D SCN10A HAND1 CLCA3P SLC3A1 ZNF124 KLK15 FCER1A EFNA5 PPM1E CES1P1 HAO2 HSAJ2425 DLK2 FLJ14107 KLHL11 HTATIP2 C1orf116 CA14 FOXJ1 LOC653326 FGF22 GPR19 SMPX CCDC106 EXOC6B
BRCA1_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/BRCA1_DN.V1_UP KRT18P51 CHAT PHOX2B KCNB2 RCN3 TP53TG5 NLGN4Y LGALS9 TLX3 DENND1C IL1RL2 USP9Y RNF122 HMGA2 SIX1 IQCA1 PRSS21 INE1 SLC16A6 STAR LHX6 GAGE3 LOC79015 ETNK2 TIMP4 ASMT FAM46C CLDN14 ZNF423 PRAMEF12 LEPREL2 FCGR2C TRPA1 GPR6 RPP25 CRYGD CCKBR AIM2 TTLL7 LOC79999 CD3D C7orf63 SLC43A1 WDR25 HAAO KLK8 APBB1 CNTN6 HIST1H3E VAV1 LTC4S ZNF682 CTNNA3 DNAAF1 TRGV7 LRRTM2 TNC ZNF780B ROPN1B MAP2 IPW CCL27 PTPRS ARHGAP15 NEUROD4 BTG4 TSSK2 RLN1 SHANK1 SMA4 SLCO1A2 ANGPT4 EXTL1 CD34 ZNF529 IFNA14 KCNJ16 RHOH CG030 CTLA4 APOH LDB2 THPO GABRB1 LINC00260 LRTM1 TRPV6 HOXB7 GML FLJ20712 DAGLA KCNH7 OSR2 TRPM8 RAG2 IL5 NKX2-2 SPO11 TACR3 SGCA KLHL35 CLEC7A MTMR8 CDX1 IGLL3P LILRP2 CILP DDX25 MYBPC1 CDKL5 FCGBP B3GALT2 CHRNA6 PRKACG CHD5 CYP2U1 PIP LRMP CMKLR1 THBS2 IL17A CD160 RPS2P45 NPHS2 GJA5 ISYNA1 CDH13 UPK1B KCNA2 SP4 SLC16A4 DAZL CLDN6 HIST1H2BJ LOC652147 CDH22 PAEP POU2F3 SLURP1 NEUROD6 GRID2
CTIP_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CTIP_DN.V1_DN CDH16 RNF19A OXNAD1 MAOB RNF125 C1orf183 GZMB FAM169A CCDC82 LCN1 KCNC1 CD53 GPR144 CLMN CA14 EDN1 PLA2G2A FLJ11235 HSAJ2425 MAPK11 PTGIR CST4 DIP2C NPHS2 TSPAN7 ARL5A PYCRL DGCR11 OLFML2A RBMXL2 CD7 TGM1 KIAA1199 CTNNBIP1 ECE2 IGSF9B ZBTB22 ADCK4 FOXRED2 CDH22 ABCB4 CNTF CCNA1 CAMKV SACS C21orf96 GPR19 RASGRF1 SCGB1A1 SLC35D1 KIAA1009 TAS2R4 OR1F2P AMPH PI15 LAIR1 HIBADH PSORS1C2 ABLIM2 IL1RN LRRC32 HIP1 SPRR2B KCNH7 MYH1 BCAM PKI55 WNT16 CRISP1 CMKLR1 CTF1 ANO1 CYP4F12 LOC643093 KPNA1 MORN1 OR10H1 RAC3 ZSCAN2 APBA1 CARD10 METTL10 EDEM1 MYH14 IQCG CES1P1 INSL3 REEP2 PTGS1 ACOXL SYNDIG1 IL12B NAT6 ABI3BP MYOT SLC3A1 RNF186 EPB41L3 ZFY KLK5 IFNA5 CYBRD1 RUNX3 KNG1 C9orf31 PTPRZ1 PAX4 CYP4F3 CHST15 RGS11 NUPL1 GPR172B FAM46C FMO5 TREM2 STAG3 TTLL3 NRIP2 MAGEL2 CX3CL1 SERPINB9 MGC12488 CITED1 HLA-DOB RPL13P5 PLEKHH3 KRT13 MGA HCN4 TRPC6 DDAH2 TFEC KCTD17 ADAM15 CDKN1C CASP5 ALX4 TYR NLGN3 TFCP2L1 LINC00328
CTIP_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CTIP_DN.V1_UP LAIR2 C16orf70 NCR1 ALPK3 KLK1 RPGRIP1 PCDHA5 SP140 S100A1 GRPR MYOM1 APOBEC1 HTR3B SMPDL3B HDAC9 KCNK2 GRID2 MED18 SNAI1 MTL5 CTRB2 RALYL KCNB2 DKFZP434A062 OPN1SW ADAM18 FGF21 COPZ2 ORM1 PER3 CD80 IFI6 HOXB1 IL8 TERT PRPH2 TTR PPEF1 CCL20 ZNF528 PKD2L1 PTGFR UPK1B PDGFRL PPP2R3B GNG7 SLC9A5 ODAM TRAF1 SERPIND1 RND2 C8orf17 CTAG1A BARX1 LIM2 CD22 PGLYRP4 GDF10 SLC16A4 BEST2 MYH6 SLC17A1 OXCT2 KCNS1 BCAN BCL2L14 DXS542 EGFL7 KCNA5 PSG7 PPIEL KLHL28 C1orf105 TNFRSF17 PTH1R CLEC3B CYSLTR1 TMEM22 LRTM1 HIST1H2AE LIN28A PNMT NPPA COL1A2 LGALS9 INSR LMO1 C15orf38 MGC13053 FFAR2 ASPA CTLA4 CHODL DDIT3 CD34 MYF6 SHCBP1L OR2F2 BSPRY KLRC4 ROM1 KCNC4 GEMIN7 NANOG OR7E47P INA PMEL RGSL1 WT1-AS MIP APOB TEK TUBB1 OLFML2B SALL2 CXCR6 FGF17 SLC43A1 ONECUT2 ZNF20 SCAND2 TSSK2 EFS LRRC37BP1 FSTL4 LOC643328 ZNF253 FAM153A CAMK1 KCNIP2 COCH CST5 ADAMTS2 ACTA1 PRSS2 PDE6H MMP8 TULP1
PKCA_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PKCA_DN.V1_DN PRKCA FABP6 MGAT4C SLC10A2 SAA1 CAMP ABO HES7 DUOXA2 PARM1 SEC1 WDR5 DDX6 LARP7 RWDD3 BATF3 PLA2G2E CLEC4D IGH@ MALAT1 ST6GALNAC1 MT4 ZNF319 SLC14A1 ETV3 TLR2 SAA2 NOP58 PCDHB15 CA3 GABBR1 DENND1B TMIGD1 ITGB6 PTK6 FAM198B MAP3K6 KCNIP2 CPT1B HS3ST3A1 NEUROD4 COL25A1 MUC5AC ADAM11 GAS2 CCL27 SIK1 KANK2 TXNRD2 ANKS1A CABYR ABCA4 KLHL1 RHOJ AHSG ALDH7A1 NUCB2 PDGFC HK2 CD19 TNNI2 MS4A4B CFD CD44 MYO1B NANOS2 ABI3BP UGGT1 BEX1 NKX2-1 MAGT1 ITGB7 ZEB2 APOF ZC3H12A HOXC8 CKAP4 NR2C2 MSC IL36A IGHM SNTB2 MC1R PIGO FERMT3 SLC46A2 SHF GLDC FAM86B2 NFIL3 TWF2 EXT1 GJB3 MBL2 ACOT1 DNAH8 OR52A1 ZDHHC1 BID SUOX PSPC1 ECE2 ADM COCH PRPF40A OTUB2 GATAD2B BAI1 RFX2 PLAU NR1H4 POU3F4 SEMA6C PROCR CENPF CP SLIT3 TIFA EAF2 MBOAT1 NFKBIZ EIF4E3 SAA3P CTSQ SLC32A1 SERINC4 TMPRSS5 PSAT1 GBP1 SPRR2F FANCI ENPP4 EDN3 CD79B IGHG1 KIAA1033 SYT12 DLG4 CYGB WAS PARK2 TRPV2 CHST1 CFH WDFY3 METTL1 ZNF503 CLEC7A CENPT ZSCAN2 BCKDHB EIF2C2 BARD1 IRX1 TTC36 PDGFRB SLC1A1 SLC30A1 TNFRSF12A APOC1 LPL GGNBP2 FXYD4 ZBTB7A TRIB1 PYCR1 ARHGEF10
PKCA_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PKCA_DN.V1_UP PLEKHF1 RDH16 SLC2A2 AFP CYP2C18 CYP2B6 PRODH2 OR51B6 LIX1 LEAP2 SPTBN4 ACOT12 DLX1 ENPP3 CYP2C8 HOXB4 VWA1 SLC23A1 TCHH ACHE CES1 GSTA3 BBOX1 ADA PDK4 C3orf62 REG1A GDPD2 FGF19 GATA4 PCK1 NR1I3 RTBDN PSMC3IP WISP2 RBPJL UPB1 AGXT CRYGB LECT2 GHRL GPR155 TSKU RETSAT CD36 YJEFN3 UGT2A3 GLI2 RNASE1 LPO GSTA4 SP6 FMR1NB NOS1 CASP6 MRAP SEC14L2 FERD3L SLC6A20 DBNDD1 CREB3L2 PER2 SECTM1 SLC27A2 LCT CDR2 EGR3 LTC4S SPNS2 TET1 USP27X TYMP PIPOX OAS3 TMEM135 CA2 ZFPM1 PAQR7 SLC5A4 UBD KIRREL HLA-E GNAO1 FBP1 RDH12 TUB GSTA2 SMPD3 SLC16A3 GSTM4 PTGDS CYP11A1 ADORA2B FTSJD1 NRG4 CYP2J2 NXNL2 ZNF865 TPMT FBLN1 PASK TTI1 PROP1 MUSK BSN CXCL17 KERA LTB4R SHISA2 PDK2 SGK3 SCOC EGR4 CLEC4A WNT10A RDH5 SSBP2 DIO1 GSTM1 C16orf5 TREH PSAPL1 ADAM3A GALNT6 ALOX12P2 CABP5 ARSG ZBTB7C SLCO1C1 POMC PPP6R2 MGMT SLC7A8 NECAB2 S100G ADRA1A SLC23A2 G6PC DKK4 GFAP TMEM56 TPSB2 CYP2D6 TUBB2B IL33 GSTT1 PACSIN1 ADCY3 SLC2A5 PLXNA3 DDX60 CELA3A KLF15 SLC47A1 ORMDL3 OAS2 RAB30 LPAR3 CCL24 DHRS1 ICAM5 IL15 NXNL1 SLC20A1 NMT2 ZIM3 PPAPDC3 ELMOD3 TEF PHKA1
MTOR_UP.N4.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/MTOR_UP.N4.V1_DN RAG1 TXNIP RAG2 NR1D2 DNTT FAM13B HES1 EVI2B S1PR1 C11orf61 EVI2A MIS18BP1 FBLN5 ANKRD36B BTG2 NFE2 TRAT1 LINC00342 HIST1H2AC FRAT2 DCAF16 CBFA2T3 WDR45 YPEL5 FRAT1 MME SPHAR CCNG2 LTB H1F0 SYNE2 KIAA0484 ELAC1 GIMAP6 TMEM80 CD1E KIAA1659 SUV420H1 HIST1H3H BAALC LONP2 AHSA2 C17orf48 PLCL1 DACH1 MARCH8 RCOR3 CD1C RNF44 ADORA2A ZNF277 CCDC28A CLK1 KIAA1661 PDCD4 ANP32A-IT1 ZNF394 HSD17B11 HOXA7 SPRY1 IKZF2 HSPBAP1 CD52 ST18 CD1B ALS2CR8 CLK4 SYF2 PNRC1 C5orf54 CAMK2N1 LRRC37A4 KIAA0754 LOC647357 LZTFL1 ZNF117 CYP2E1 GALNT7 ZNF34 KIAA1731 EPM2A ERAP1 TRIOBP GALNT6 CIR1 DPY19L2P2 BRWD1 DKFZp547G183 CEP68 MRE11A NEAT1 CEP135 CLN5 CBX7 BRIP1 CUX1 KIAA0889 ARID5B TRA2A LRRC37A CD1A HBP1 FAIM SRGAP2 ST8SIA4 FOLR1 PCNXL2 ZNF124 KIAA0430 FBXL4 CHIC2 ZNF682 VEZF1 ZNF673 C15orf5 RYR2 C11orf95 SLC23A2 STMN3 IFT140 ZNF443 TRMT1L PCMTD2 BCKDHA ANGEL2 MNT CRBN IGBP1 ZNF271 ECHDC2 MAML1 RPS28 XYLT1 ANXA5 ZNF14 ZNF268 MXD4 TPM2 BCOR KAT2B POLR2J4 HHLA3 SPATS2 ZXDC TNRC6B BIN2 C9orf69 SLC35D1 GCC2 SLC41A3 SENP7 FLJ42627 PBXIP1 ZNF711 ATF7IP ELF2 TPP1 ZBTB20 SLC2A11 DMXL1 C14orf101 EFHC1 SCN3A REL RAD51B C3orf64 ZNF544 ZNF180 HIST1H2BK ZBTB16 C1orf56 PTPRCAP SOS2 ATF1 GPA33 TM7SF3 ACTR8 HIST1H2AM POLH BBS1 TFPI TRIM23 SMPD3 VNN2 ATP6V1G2 CCNE1 HHAT MPHOSPH8 ZNF187 SENP6 KIAA0355 MEPCE ING4
MTOR_UP.N4.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/MTOR_UP.N4.V1_UP CHAC1 ASNS CTSG SLC7A11 VLDLR PCK2 KIF21B BCHE ATF3 TM6SF1 MFAP4 CYTL1 BHLHE40 CLIC4 BCAT1 IL21R ANXA3 SEC24D OPN3 SLC3A2 SAR1B IFRD1 EIF4EBP1 PDXK TUBB2A ELOVL6 LDLR DHCR7 GPR65 PYCR1 DLEU1 TBRG4 KIAA0020 IL7R PIR RRP12 MAP1A SLC6A9 ASS1 GOT1 CALML4 DDIT3 SQRDL PSPH IFI30 KLHL7 TIMM44 SLC39A14 LARS2 GAS2L1 CEBPB SLC39A4 RIMS3 VEGFA ARL4A GALE MGAT4A HERPUD1 RIT1 EBNA1BP2 NANS CD79B LGMN CHORDC1 PAK1IP1 CCBL1 SLC1A5 POLR3G FAS CLPB DDIT4 CARS COASY RRP15 RRP9 CEBPG GUCY1A3 EAF2 ABHD6 ARG2 PTPRK MCPH1 ADAM9 APOL6 OGN IDH1 ADM ULBP1 BATF TRIB3 PECAM1 PLCB1 GFPT1 MSMO1 GBE1 BSPRY SLC31A1 UGCG ETNK1 CNIH4 FKBP11 COQ2 TFPT ISOC2 E2F5 GALK2 MRPL39 PFKM GK3P FAM129A NFIL3 SLC7A5 ARL3 CDK16 C8B ASCC1 CCDC86 RPAP1 TSC22D3 EIF2B3 ACACA RABEPK PANK3 TRAF3IP2 GRM2 ZNF259 DSCR4 DDN CHUK LIMA1 DNMT3B DBN1 SARS COX10 TTC35 GPRC5C NUP155 NQO2 LPCAT4 PTS PCCA ITK PHACTR2 VARS ADARB1 SLC43A1 DOK2 ASPHD1 TSNAXIP1 FGF1 GTF2E2 VPS54 TRPM6 MAST2 GH1 OPRL1 MARS GK OBFC1 GLRX2 FAH SLC25A32 GCH1 HYAL3 SLC6A6 VPS33B PLS1 BNIP3 SSTR2 CUTC SLC4A1AP TMEM135 STX4 YRDC SYNPO IDH3A PHGDH ITPR1 PJA1 OPCML CDRT1 USH1C SREBF1 SPRED2 MIPEP RBM28 LHX2 ICT1 CAMKV NME7 CASR SLCO4A1 SDF2L1 E2F6 MRPL22 PDHX
PTEN_DN.V2_DN http://www.broadinstitute.org/gsea/msigdb/cards/PTEN_DN.V2_DN RPS4Y1 SEPP1 BMP4 FABP6 OGDHL FRMD1 SCGN NDOR1 LINC00339 ST6GALNAC2 DDX3Y WIPF1 FES CEBPA GPR3 RGS2 UNC119 MGA NEO1 CYP11B2 MID1 SPDEF RBM4 PCSK1N MAGOHB BATF3 BAHCC1 NUDT18 NVL ZNF574 TEX13B GFM1 COPZ2 APBB1IP HOXB13 TUBBP5 HCLS1 TRAF2 IZUMO4 PTEN KRT7 ATF5 NR4A2 CYP20A1 FOXH1 DDX31 HIST1H4E ATP11B HOXC5 CORO2B ANXA10 CCDC88C DYRK4 RIT2 CRBN CCDC53 NRTN BARX2 APOLD1 AP4M1 MT1M CCDC132 TULP1 BAMBI STMN1 MXD3 SGK1 REPS2 BCOR SERPINH1 GPRC5C SSTR5 TUBB1 TBX3 TRPM4 AKAP5 C8orf55 MAPK3 MRC2 CLEC7A CBX7 KRT23 RIBC2 UCP3 ZNF446 ENTPD7 SPHK1 RASA3 PLEKHO1 SMAD7 ELANE PRMT7 CCDC99 FAM176B C5orf13 DHRS2 KLHL11 PLAG1 ASB7 MAFK NIPAL3 ZNF124 TACC2 MLL2 NOS3 OR2H1 SERPINA6 HBA2 ENC1 DLX2 ADCK3 ABLIM2 AHSA2 MAP3K5 BARD1 RECQL4 AP1G2 FRAT1 MEGF8 FANCA IRS4 PVRL3 ARHGAP33 LOXL1 LOC645340 HIVEP3 FCAR HIST1H3D FGFR3 ZFY TGFBI GUSBP11 TMEM176A RPGRIP1L HNF1A ARHGEF40 PIDD TERT CRIP2 CHST12 CRYAA RIC3 GTF3C5 KCNE2
PTEN_DN.V2_UP http://www.broadinstitute.org/gsea/msigdb/cards/PTEN_DN.V2_UP IL32 EHF BBC3 DENND2A CPA4 EMP1 OSGIN1 AKR1C3 MYL10 IL17A GMIP TRIB2 BUD31 LOC647835 GPR87 CCL16 KRT15 NAV3 LIPG ARVCF ZNF668 CEP41 CLPB HSPB8 SERPINB5 TSHB ARHGDIB SATB1 ATP2B2 TMEM127 SPOCK1 LCN2 ZNF549 ALDH1A3 ERN2 AGPAT4 PRKY PC ANGPTL4 CUEDC1 LAMA3 SAMD4A GNA14 C14orf56 NNAT RHBDF1 CTNNBIP1 KCNJ3 KLHL28 UPK2 COL13A1 NID2 PCSK7 OTUB2 KLK10 SERPINA5 DEFB126 BIRC3 SH3BGR NOL4 CASP4 LOXL2 SLCO1B3 IL4R PTGDS SPAM1 TP53I3 ANO2 ZMAT3 CLIP4 ANXA3 THBS4 G0S2 CHRDL1 MIR22HG FYB PLAU OR12D2 GPM6A SPIB CA5B GK3P CHAC1 C1orf20 GVINP1 SLITRK3 KRT75 IL1B CHRM4 GLRA2 TNFRSF10D JUN DGCR11 LIG4 GYS2 DNAJB5 UTRN OVGP1 GRID2 GPR183 ST3GAL4 PQLC3 RND1 WT1-AS PTGS2 VAMP5 TBX5 VPS13C SLC2A4 AHSP NAALAD2 SECTM1 CD86 MPV17 CEACAM21 ALDH1A2 IL8 MON1B IL11RA TNFRSF10C PPAP2B ARL4C SLC1A3 HSPB7 ULK4 APOL3 HSPA4L MC3R KRT8P12 ARHGEF5 ANKMY1 RTN1 HTR1B C12orf5 BNC2 IL7R AKR1B10 ZMAT5 KRT32 P2RY2 LSP1 CSF1 LOC440895
DCA_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/DCA_UP.V1_DN C19orf28 PKD1P1 TXLNA NOL8 MYL10 ADM2 MED23 CST7 TCIRG1 TGFBRAP1 C1orf135 PTPRG CPB2 NUDT11 SLC7A9 STAG3 KLHL1 NPIP LRP5L SNCB NXF2 PIN1 LOC643326 KRT5 PPP1R13B SPRR1A PDE6A SETD4 JOSD1 UPK1A SLC16A10 RAB11FIP1 GMPR LOC643328 MTRF1 MLL2 CLIC5 NACC1 VPS52 MARCH2 ENO3 PPP1R12B C15orf29 WDR91 MAGEB3 NR5A1 C11orf61 PPCDC TCL1B LOC653326 SLC38A3 DHX57 LRRC37A2 DHX35 SETBP1 IPCEF1 TNRC18 SIAH2 GSDMD ZAK ZNF248 PLA2G4C PEX19 N4BP2L2 MSH5 PDK2 PLK3 DCAF17 FGF9 YIPF3 DCAF13 LAT HR44 NUP62 POR SLC22A17 ATP10D GPR137B CDON CHEK2 SLC29A3 GPR19 SHOX2 MAGEH1 IFNG CHST2 RNPEPL1 AGXT2L1 PHKG2 TG TNFSF18 LONP2 SLC6A6 LRRC14 C2orf18 ABCA5 ANKRD2 TRIM52 SPC25 PES1 CX3CL1 ZKSCAN4 ZCCHC24 LIN7B MATN4 IFNA5 RS1 ARHGAP15 SERPINB3 KIAA0894 SHMT1 IRAK4 NOTCH2NL KRT24 KCTD3 RBM14 ZNF32 GPT TMEM115 FGR PKD1 AGAP2 RASSF4 ZNF652 CDH16 ZNF286A C17orf63 SKIL PRPF38B LAMA3 OR11A1 ANAPC10 COL21A1 CA5A ARHGEF9 ASPM GRAMD4 NFASC RASL10A S100A14 TCL1A KRT1 PKP1 FAM204A GPR116 CTAG2 INSL5 NUMB CMC1 ACIN1 ALK MGC2889 GALR3 MFGE8 RSG1 STEAP1B TRPM6 CDK5R2 PRRX2 HIST1H3D CDK10 IGLJ3 SIRPB1 C10orf12 LOC646541 FLJ10038 SNX24 TBX6 MNAT1 SP140L TAF1C IP6K2 IL10RA STARD3 CACNA1S MAP3K14 ACCN4 CNTLN ZNF821 PPP1R17 POGLUT1 FUT3 RALGDS GRID2 TDRD7 C1orf109 CNNM4 C2CD2L NR4A1 ANKRD46 ZNF84 MCTP1 IRF2BP1
DCA_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/DCA_UP.V1_UP IGLV2-14 IRGC IFIT2 SMA4 TTC18 MAPK8IP2 ZNF117 MDK C1orf105 GABRB2 ANKRD53 CYP2B7P1 CRIP2 NPC1L1 SLC28A1 MCF2L CATSPERB LPAR3 CORT COLQ KLHL3 CD82 ELAVL4 LAMC3 HCG9 DNAL4 PHLDB1 ABP1 WNT2 SERPING1 PRO2964 BTN3A1 RAI1 NTN3 CTSG ATP1B2 USP29 ZNF639 ZSCAN12 PTPRT NRXN2 CLCN2 GPA33 GRIN2D IFNA10 MYOZ3 CLPB CUBN CDC45 MCTP2 IGKV3D-15 LGALS7 HIST1H2BI ZNF185 TTLL3 SPIN2A AHSP PLA2G2F ZNF750 KIAA0513 AK4P3 TNS4 WDR25 KRT13 FGF6 PRDM14 SLC22A14 SERPINA1 EFS GPR45 TEX13B ZSWIM1 RIMS2 MOGAT2 AURKB GLS2 GRIA1 WISP1 CCT8L2 WASL CACNG5 GDPD3 PLAA C22orf31 C17orf88 CA6 SARDH BEST1 HTR6 DNAJC16 FMO6P IL36RN F2 ARHGDIG GIPR OR3A2 OXCT2 PTGFR USP6NL IL23A SHCBP1L GRM5 ZNF91 KLRB1 GARNL3 RNF125 CCDC71 CRYGB OVGP1 AK5 CD27 TACR3 PAK1IP1 KIF17 IL8 PIGV WNT16 CLN6 SNX17 LRFN3 TSKS MYCT1 INO80B RPRM ACP5 USF2 BMX PRRG4 CD1B RNASEL COBL CNGB3 LINC00341 KIAA1107 IL2RA DNAJC28 ITGA8 DPP6 CASP2 SERPINA4 DEM1 RRP7B KIR2DS1 ALG1L2 COPZ2 CST2 EIF3FP2 TYRO3 ADAM19 BFSP1 CD70 FGD1 MX1 VPS39 CABIN1 COPG2 ADARB2 LOC79999 LIMD1 CLEC7A KREMEN2 INSL3 CETN1 BCAS4 EPHB6 ZNF157 ATF6 DCXR HHLA1 EYA2 IRX4 CREB5 CYP3A43 HOXC5 ANKRD1 PQLC3 CCDC87 PNMT TCEB3B MIR600HG TNNT2 CAPN11 C10orf10 RPE65 AIF1 FGF22 FRMPD1 MAPK8 HTN1 SIX1 SOS2
ESC_J1_UP_EARLY.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ESC_J1_UP_EARLY.V1_DN BCL3 TAGLN ETV4 SOCS3 ACTA1 SFN CTRB1 GAP43 TFEB FGF17 KLF4 EGR1 GBX2 ANXA3 RRP8 GSG2 SPRY4 MYC AP4M1 ADAM23 TNFRSF12A TMEM98 ANXA1 GPATCH4 RPP25 RIOK2 BMP1 ID3 RELB VAX2 EDN1 WSB1 NSUN4 MRAS FOXD3 MAPK7 RNASEL NAB2 ZFP36L1 TGM1 C17orf96 SLC30A1 PQLC2 ZNF423 C11orf24 PPP2R3A ERAS AMH B3GALT6 MAD1L1 QSER1 ZNF48 UHRF1BP1L GTPBP5 ATF5 CYR61 LLPH GSPT2 ARHGEF10L TSPYL4 ENTPD4 ANGPTL4 ANXA5 TRIB3 HIST1H2BC ZFP36 ZNF295 HDGFRP3 NUDT11 C16orf74 METTL13 BMP4 SLC35G3 LIMS2 ID1 GBP1 VWA5A TREM2 MAPT TLR9 STK4 UBE2J1 MYL9 LALBA DNAJC30 CNN1 FGF18 PTPN22 LUC7L3 LAMA1 DAPP1 CORO2A KRT8 RRP12 SAP30BP SLC16A2 KRT19 REM2 SERPINE1 STAT3 FKBPL CIRBP RNASE4 BMS1 EMP2 ZBP1 ZFP57 MDN1 REEP6 IGFBP3 VPS33B ZNF35 DBR1 USP38 JUNB KLF1 LTB TMEM121 PTGIS MKI67IP UXT LGALS6 CNO RAB33A FAM118B TRAIP HYAL2 ARHGAP35 TCF15 NOL12 DUSP6 TRPS1 NAPSA GBP2 BAG5 CENPB DCLRE1B MED6 ADAP2 KLF13 TPD52L3 CA7 GNA14 CCDC59 MRPS11 DRD4 ERF LAMC2 INHBB PPP1R1A KTI12 LPP PACRGL TREX1 RECQL CEBPD C19orf48 CRYL1 BRWD1 MVK PPCS FETUB FBXO33 TLE4 APOBR SYT12 PHB ZNF808 DIMT1 PAFAH2 DNAJC24 UBA7 TMC6 TGM3 ATP9B RPS6KB2 RAMP1 DPYSL5 NINJ2
ESC_J1_UP_EARLY.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ESC_J1_UP_EARLY.V1_UP ADM MYB NDRG1 C1orf210 RAB3IL1 CDHR1 NARF NAGLU GIMAP3P HEY1 C14orf37 SESN3 ADCK3 CRELD1 MEP1B FAM134B CIDEB NR1D1 ASCL2 ST5 PRSS12 DIDO1 PHOX2B LOXL2 P4HA1 CXCL12 GADD45B AQP3 TMED3 AKR1C2 SERPINE2 POLH PCMTD2 METTL20 DPP7 ZBTB16 TMEM38A DAB2 PRSS8 FXYD3 CD82 ABCG1 HOMER1 SIL1 DLL1 NANOS1 CYP2S1 KANK3 MKL2 AUP1 GADD45G DSCAM CD47 TSPAN1 D4S234E HES6 RPL22 NAGA CUBN NLRP3 TEX264 PIGC GDE1 CUL4A KRT7 NCF1 GPX6 ANGPTL7 TRIB2 TRAFD1 PHF21A NARG2 CPT1B PCSK4 KIAA0195 PTPRCAP ADSSL1 RASL11B PTGER4 AMPH MAG BTN1A1 LYRM5 LMBRD1 PIK3R1 STC1 CD33 SCRN3 NGLY1 DHRS7 C16orf62 TTR RB1 MPP2 C9orf89 EDARADD COLQ NEK2 EMID2 C6orf105 CEACAM21 PCTP FSCN3 FGFRL1 ZFPM2 SOX15 CDH3 IL36RN PDK4 HIVEP3 HMX2 C14orf132 WBSCR27 GZMA C10orf35 KRT13 KRTAP13-1 THRA SEMA4G APOC4 FMNL3 ALX3 A4GALT NAGS FGF14 P2RX4 ATP5S NAAA FAM116A BMP7 FLT3 LHX3 TMEM106C PPAP2B C10orf82 C9orf21 C19orf66 CDKN1B BCL2L2 C19orf20 SLC22A13 C10orf54 GPT P4HA2 ACSS1 CPPED1 SLC24A6 IRX2 GPRIN1 NECAB3 TFF3 PDGFRB SLC18A1 TLE6 MOCS1 CACNB3 C4BPA TEX101 TYMP ZIC2 GRINA ENPP5 EVPL CHRNB1 DBNDD2 DRAM2 ECE2 IL15 NHSL1 FOSL1 ZBTB7C NME3 BNIPL TXNDC16 NR1H3 EPHB3 CORO2A ADCYAP1R1 SCNN1A PDPN HPGDS CD68 TSHZ1
ESC_J1_UP_LATE.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ESC_J1_UP_LATE.V1_DN ETV4 TRH ACTN3 BCL3 CALML4 RPP25 GBX2 NR0B1 FGF17 SLC27A2 TUBB3 NXF1 RRP12 ERAS MDN1 GLI2 CORO1A MYC SPRY4 PCOLCE TGM1 SLC47A1 TCF15 ZNF423 PHB PARK2 SOCS3 GPATCH4 MRAS CLTB CRMP1 TDGF1 WDR83 PCOLCE2 DPYS ANGPTL4 PLA2G1B ADAM23 GAP43 SNTB2 GEMIN2 GYS1 TFEB TTC27 RIOK2 GLI1 INA NAA10 SLC1A5 GSPT2 E2F8 DLC1 CRCP CCNB1IP1 STAT4 EVC XRCC5 RASGRP2 PSMA8 DOC2A PDSS1 PDGFC DHODH SLC4A3 PASK NAPSA POLE PPP4R1 FAM129A MVK EGR1 POLA1 ATG2A GPX2 BHLHE40 ZNF428 MRPL18 MORC1 QSER1 SULT4A1 NNAT DDC NEFH DIMT1 ARMC6 C11orf61 ZFP62 ERCC6L NGFR GRASP PUS7 ITGB7 RASIP1 EXOSC1 AMH PHLDA2 DNASE2 FGF18 EDN1 ECH1 ATPAF2 NSUN4 JAM2 DDX49 HELB CD1D CIRBP LCK DBR1 SALL1 NOTUM TLE4 KLF4 GNG3 UXT ICAM1 PTRF AOAH ZCCHC10 HARS2 WDR75 DAPP1 INTS6 NTN1 C3orf37 LMNB2 DNAJC24 TRPS1 MSRB2 MCF2 GTPBP5 MRPL19 C11orf20 SMARCD3 STK4 MKI67IP MAPK7 GFPT2 WWP2 DDX3Y TAF13 RPP40 VEGFC NPHS1 PPCS C9orf30 FOXN4 CAMKK1 POLR3K BMS1 TGM3 RRP8 C16orf88 TMEM121 TBCE TRMT1L HCK PIH1D1 TET1 ANKRD10 PTCH2 RNPC3 RRP9 TTPA SOCS2 DDX27 PPIL4 NOBOX TCEA3 SYNCRIP ETAA1 ACACB SI PIK3R4 PTGIS HOOK2 PRMT6 MMP11 SFN VPS33B TRAIP TUBB2B FAM169A ENDOG MED11 TSPAN17
ESC_J1_UP_LATE.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ESC_J1_UP_LATE.V1_UP TTR AFP S100G APOC2 CITED1 TINAGL1 APOA1 APOM FGB GKN2 CTSH PTH1R CUBN NRK RBP4 HS3ST1 APOA2 MOGAT2 SPP2 SLC39A8 GLIPR1 SPINK1 TAX1BP3 HKDC1 ENPEP PARM1 LGALS2 UGT2B10 B4GALNT2 FXYD3 APP GATA6 TMPRSS2 PRG1 ST5 MTTP SLCO2A1 DAB2 CTSC CA4 FAM134B TEX264 HTRA1 LGMN CYP26A1 DPP4 ESX1 PRSS12 SEPP1 SEL1L3 APOB PODXL FOXA2 C1orf210 COL4A2 KRT7 ANKRD1 OCLN SOX17 TMED3 DRAM1 FHL2 LMO7 GATA4 TCN2 FLVCR2 HNF1B PRSS8 CRIM1 CHST15 ABHD5 C10orf58 WBSCR27 ID2 PHLDA1 F3 PARVA H19 MORC4 ZDHHC9 GPX3 GPRC5C DLK1 RAB6B RNF128 FST FRZB OAF P4HA2 SLC40A1 GYG1 FUT8 CRYAB ARAP2 PGA5 FARP1 LMBRD1 CHRNB1 DBNDD2 MYO6 HMGA2 GRINA DSP RAB33B KLB SLC22A23 AMN SPOCK1 RGL3 P2RX4 CD55 LAMA1 IGF2 CYR61 RHOU LAMB1 TFF3 S100A1 CAPN6 CTGF UNC5B P4HA1 GPC3 NAGA PLXNB2 PTPN21 LOXL2 ATF3 ADAM10 HNF4A MYL3 PCBD1 LXN PRICKLE1 LPAR3 RAB11FIP5 DAZL PDGFRA RNF130 BICC1 TGFBR3 IRS2 RAMP2 GADD45B PLA2G12B BGN CITED2 ENPP5 TNNT1 TNFRSF12A COL4A1 GKN1 CDC42EP1 SOAT2 ZFPM1 GSN HLA-DRB1 PCDH1 TUFT1 AMOT SHROOM3 MYO7A SGCE MYO5B TDRD7 RGNEF COL2A1 KRT19 FOXQ1 GNG12 SERPINE2 PDIA5 GGTA1P VAMP8 CLDN7 SEPN1 SNAI1 BMP2 WLS CIDEB FGF5 VIL1 SESN3 IGFBP4 TPCN1 TFEC CBX4 TEX101 NEU1 EFNA1 PEG3
ESC_V6.5_UP_EARLY.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ESC_V6.5_UP_EARLY.V1_DN SERPINE1 ACTA1 KRT19 GJB5 SOCS3 TNFRSF12A PTRF ANXA1 ANXA5 TGM1 MRAS LAMA1 SPINK1 TAGLN BHLHE40 S100A4 BCL3 KLF4 HTRA1 KCNA1 CAV1 EMP1 KRT8 AHNAK BGN COL1A1 IGF2 GYS1 SFN FBLN2 LOXL1 ANXA3 TNC CCDC80 GIMAP3P TM4SF1 SMARCD3 TIMP2 C16orf74 CAPN2 S100A6 OAF LTBP3 COL16A1 CALD1 NUPR1 CYR61 INHBA FHL2 IGFBP3 SLC5A5 INHBB FZD5 JUNB YES1 CD37 CEACAM21 TSHZ2 T TINAGL1 LAMC2 TTYH2 MYO7B MGP GSN CPE NID1 CD44 AXL PMP22 DSP BMP4 RASSF8 PKD1L3 GBP2 KRT18 NTN1 HBEGF ESRRA SLC39A1 AQP3 FBXO6 ZADH2 ABCA7 SCARA3 COL4A1 LBP PARVA AEBP1 SLC8A3 CALML4 COL4A2 PNRC2 NAB2 C3orf70 TFCP2L1 HES7 TUBB6 PLAU CMTM7 ADAM21 KRTAP13-2 CDC42EP1 WSB1 COL3A1 CSRP1 ZBTB32 C16orf89 SERPINF2 PLCL2 COL1A2 GPX2 PBX1 ANXA2 LOX KRT17 KRT16 ABCA2 PRCC BAG5 TGFB1I1 KIT IGFBP7 B2M TFEB CCDC34 CTGF VAC14 F2RL1 KLK10 SP5 MAPK13 SULT1E1 CRY2 BCAN FBXO28 FGF17 CIZ1 SDPR SLC41A3 B4GALT7 PCOLCE GBX2 KIF18A CARD14 SNTG1 MOGAT2 TRIM54 GPCPD1 UTS2 CACNA1E FGF2 DDHD1 CAMK4 GJB3 UBD DEGS2 BUTR1 STARD8 SERPINF1 GAP43 CADPS KLK11 ALX3 TAS2R4 ZFP36L1 FAM198B COL11A1 FAP APP ALCAM CFB
ESC_V6.5_UP_EARLY.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ESC_V6.5_UP_EARLY.V1_UP OTX2 RASAL2 GATAD2B GADD45G RAI1 PHF21A ENG POU3F1 LTF DEPTOR ZMAT5 SYT8 FOXQ1 ARHGAP27 SPOCK2 WDFY3 FGF19 ENPP2 FGF5 MBD4 KLC2 KIF21A SCAP DLL3 VEGFB PRKACB ZNF771 HIGD1C CYP27A1 SLC23A1 SGTB MYB AZI1 NARF TMEM121 C9 CGNL1 C5orf25 SUV39H2 SSX2IP TMEM42 RPRD2 CSNK1G1 METTL20 SYT3 SASH1 TTPA RYR3 SMPD2 CELSR3 WT1 CCDC164 ADAMTSL4 CORT CHD7 ABCC6 DOC2A NME3 LPAR4 GATS SPEF1 SYTL2 ARID3B SH3RF1 HTRA2 PCYT2 SLC35G3 DACH1 GSTT2 CCDC114 SP1 KCNC1 PRICKLE1 TERT RNF123 FBP1 ZNF322 SEPP1 TNFRSF1B HDAC11 PDZK1 GPR153 GRM8 MGA WNT3A OTUD7A TEX2 KLF13 OCLN PTK7 NCOA2 SATB1 AQP2 MAGI3 ANKRD2 MBOAT1 VPS39 CCNK ITIH3 NRL LEF1 GPRC5B CBWD1 SLC29A4 GPD1 PMFBP1 TMEM186 IRX2 PSMB9 SLC16A3 CA4 PTPN23 EPB41 WIPF1 CLEC11A ATP8B2 LIPF ARHGEF16 STIM1 PKDREJ MLLT1 IFNA2 SOX11 TCEAL1 DLC1 LPP-AS2 CSN1S2BP CACNG3 TMCO4 PCP4 BBX SLC5A11 LRIG1 TEX9 ZPBP PURB B4GALNT2 TNRC6B FAM189B DNAJB2 EFNB2 ERCC2 ZNF286A GABRR2 ZNF865 F13A1 HIVEP3 ZG16 GDPD3 TMEM158 AIRE MAST3 MARCH9 BMP10 CRAT MDFI EGLN3 ZDHHC6 HES6 IGSF8 ECE1 ACSS1 GPA33 OPRD1 LIMD2 RUNX1 AGER PARP6 ARHGEF3 ARAP1
ESC_V6.5_UP_LATE.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ESC_V6.5_UP_LATE.V1_DN CALML4 ETV4 ZFP57 TGM1 NEFH GBX2 NR0B1 BCL3 SERPINE1 SEMA4B PCOLCE KLF4 RRP9 SFN S100A4 TCF15 MORC1 ACTN3 SLC27A2 MDN1 SULT4A1 RPP25 MGP ANGPTL4 AOAH GPX2 MRAS NUPR1 RRP12 GADD45A HADHB FGF17 PLA2G1B ERAS ZFP42 SMPDL3B SOCS3 OLIG2 GTPBP5 CCNB1IP1 TUBB3 PCOLCE2 MSRB2 RASGRP2 C16orf74 BGN KRT17 S100A6 ZNF423 TFEB CLTB BRP44L TTC39B C17orf96 WDR46 TEX14 RIOK2 E2F8 PSMA8 ZBTB8A GJB5 ZC3H8 ANXA1 FAM169A GYS1 EXOSC1 ZBTB45 TM4SF1 DPPA2 ARMC6 PDSS1 MYC PDGFC HES7 KAT6B FBXO15 TIMP1 ZNF295 CBR3 ZBTB32 BID GEMIN2 PLK3 KIF18A CRCP ADA GIMAP3P LCK TRMT1L PHB UFM1 MSC KAT2B FASTKD2 ICAM1 CTH QTRTD1 ZCCHC10 FZD5 PTRF C19orf48 GDF3 CRMP1 ZNF566 SEPT1 N6AMT2 GPATCH4 BNIPL DEDD2 ZNF428 JAM2 NEFL C9orf82 ESRRB NOTUM CD38 DAPP1 SPTBN4 DBR1 ECH1 TAF1C CHAC1 TRIB3 VAC14 ZNF274 ZFP1 DDX4 FBLN2 PRX LOX DIMT1 DCLRE1B PRADC1 AVPI1 TEX19 PDE12 NPHS1 CBX7 POLA1 ATF1 ACACB FAM208B AP4M1 TLE4 TCEA3 KLK10 SPRY4 MANBA GGCT KCNA1 DYRK3 DDX51 SGK1 ITGB7 INHBA ZMYM3 FOXD3 PTCD1 NOL12 C16orf89 SPP1 INHBB ACOT8 WDR75 MED29 BIRC6 GLI2 GJB3 C3orf37 GLI1 PRCC C11orf24 GPA33 CBY1 PLEKHA4 RASIP1 LGALS3 BSCL2 RBM43 BDH1 EMP1 CYCTP ABCA2 TMEM79 FTSJ3 TTYH2
ESC_V6.5_UP_LATE.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ESC_V6.5_UP_LATE.V1_UP SLC39A8 CA14 FOXA2 CYP26A1 APOA1 TTR CITED1 S100G TCN2 FGF5 APLNR EOMES CTSH APOM FOXQ1 COL2A1 MOGAT2 SOX17 VEGFB P4HA1 CMTM8 NRK LOXL2 OPN3 FRZB PTH1R FGF8 MOSPD1 GATA6 OTX2 DAB2 NENF HBG2 SOAT2 GPRC5C C10orf58 CHST15 RAI1 GATA4 FGB PTPN13 CAPN6 SLC22A23 WLS KIF21A EPB41 APOB OCLN GPX3 ZDHHC9 TMPRSS2 CA4 PODXL RNF130 SPOCK2 CD55 DKK1 VIL1 GPC3 RBP4 PKDCC SEL1L3 G6PC3 AFP SGCE HBZ RHOU DPP4 BAIAP2L1 FGFRL1 ARID3B MFAP2 SEPN1 HBE1 APP CTDSPL CDH2 NEPNP MYL3 RECK P4HA2 GYG1 NAGLU GRINA LHX1 CCNG2 PITX2 AMOT SLIT3 RGL3 MYO6 SH3RF1 HPN EFNA1 MSX2 SCCPDH KDELR3 MICU1 FOXA1 PRICKLE1 CYBA SAMD8 PRSS8 SEPP1 BVES ANKS1A GATS BBX LCP1 ARHGEF16 FBXL20 STX2 ARFGAP3 NUDT11 FAM134B SMPD2 RAMP2 C4orf34 BMP2 TINAGL1 RNF128 ZNF521 RIPK4 KIAA0930 ARF5 PLOD2 HEY1 PLAGL1 GAS1 HNF1B KRT7 DCXR GATAD2B FZD8 PDZRN3 GSC PDLIM3 CLDND1 SIX5 EGLN3 PCMTD2 C14orf37 COL4A2 FARP1 HEXA H19 IMPAD1 APOC2 LIMD2 PARM1 H1F0 LPIN2 RASAL2 IGF2BP2 TNNC1 UNC5B NDRG1 CUBN POSTN EVX1 SIL1 VAMP8 TMEM98 TNNT2 MYLIP IER5 ZFPM1 MACROD1 FRAT2 TSPAN7 SLC27A3 LGMN PRSS12 PLXNB2 LMBRD1 PURG PRKACB TRAPPC6A SATB1 PRG1 NARF FXYD2 FZD2 PJA2 FAM107B GRIK5 SPP2 MTTP STX7 COL4A1
ALK_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/ALK_DN.V1_DN IFI27 RHO SEMA7A PCDH8 IFI6 CTRC EGFL6 HPX GRM2 EFHD1 KIAA0509 STUB1 KCNN4 MAEA NMNAT2 ABHD8 SPTB IFI44L NAT2 MYL10 CAMK2A GPR162 TEX13A FOS GPA33 SLMO1 PYY PSORS1C1 OR1D2 CST4 LOC51190 SERPINF2 PAX1 SLC28A2 IRF9 THSD4 AQP3 IGFBP6 CEP41 CTF1 CCR8 CHRM4 MX1 PRPH LOC100288594 FOXA1 DPEP1 CNTNAP2 TRIM17 LGR5 SERPINI2 DLGAP2 MYH1 PENK LECT1 BCMO1 ATP2C2 CD300C LOC157627 ADORA3 DKFZP434C153 CEACAM6 GYPE PROZ DOK3 C16orf59 LPAR2 GSG1 HDAC9 LOC145678 ZFYVE26 TCP10 KIAA0408 VPS37B UTY PTPRZ1 OLFM4 DOC2A RBPJL C17orf88 COL9A3 NDRG2 FXYD6 SEMA3E UNC93B1 FGL2 USP46 AGRP MIA RXRG CRYAB CEACAM7 KCNJ9 ST8SIA3 TIAM1 GRB7 ANGPTL7 HSPA1L GCKR PTPRF MGC2889 C18orf1 OAS1 OR10J1 P2RX2 VAV1 VAV2 LCN1 KAZN PPP2R1A DIO2 DNASE1L2 CLCA1 SLA ADCY2 FZD8 FLJ11827 PRDM14 GABRG2 PRODH ZBED2 TTC38 EFNA2 ARID3B PTK2B RPL23AP7 CIDEB CMKLR1 GPX2 C14orf102 CIC OPRD1 LOC100288903 ESRP1 AP1G2 LPA DNAJA4 ITIH2 CCDC81 GPR45 INPP5D RTP4 SLC10A1 LILRA6 LINC00260 KCNC3 CASQ2 MTHFR
ALK_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/ALK_DN.V1_UP DDIT4 SLC7A11 INHBE FGF21 VNN2 GRM1 TRIB3 CTH VSTM4 CHAC1 GRPR NTRK1 TREM1 SLC7A5 DMP1 SPRR2C CRYGA SPP1 PSAT1 OLFML3 DLX6 UNC13A HLA-DMB PIK3CG ADAM28 KYNU LTC4S FJX1 EREG VEGFA PDZD7 CATSPERG ARHGAP4 DECR2 VEGFC KRT81 SCN9A RIBC2 PYY2 ZNF639 STC2 CH25H CEBPG GDF15 RBM17 CFTR ZNRF4 CA3 TTLL2 THAP3 MLC1 BDKRB2 NFKBIL1 C8orf4 HMGB3P1 MRAS FABP2 CCL20 PYGB AMELY RRAS TBL1Y PCK2 CCR7 ENTPD3 MTHFD2 CES1P1 EPAS1 ETV1 CCL19 OR10H3 FAM188A GRRP1 LIN28A CXCL5 STEAP4 LYL1 FLVCR2 PNOC CARD9 AIF1 SCN1A PRDM1 BEGAIN P2RX3 SLC12A8 FMO1 CCNK FAP GNAT2 IL1R2 NNAT AQP7 CXCR5 NOD2 FOXP3 UBQLN3 LOC646452 CTRB2 LOC650610 PROL1 STMN2 IGLL1 BMPR1B IL6 FBXL8 SMPX CLSPN ACTL6B ANGPTL4 GNA15 TFEC TDO2 CHI3L1 RAB9BP1 FBXW4P1 B3GALT4 SLC1A3 ADAM12 LOC440792 SLC1A5 GDF5 EIF3FP2 MT1H AQP9 TBX2 XBP1 SAA1 HIST3H3 CHST8 BST1 FLJ13310 LMX1B ENPP2 CBS SLAMF7 SLC6A9 SPACA1 ANGPT2 MPO GALK1 CSTA ASNS SCGB1D1 CA2
BMI1_DN_MEL18_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/BMI1_DN_MEL18_DN.V1_DN SLC17A6 PCDH8 IFI27 KCNJ16 PENK TMEM176B ID4 CDH10 A2M EFHD1 PCP4 GAS2 SEMA3E FOS SLPI LECT1 SCNN1A MIA TMEM176A APOE DDX60 AQP3 CCKAR PCSK1 IL1R1 IFI6 SLC16A4 ID2 SEPP1 TRIM2 CXCL14 EYA4 BST2 LY6E IFITM1 CH25H EPHA4 CLIP3 C6orf64 PDCD4 GPX3 AK1 C16orf80 IDH1 FLJ13197 C1orf54 METTL7A MCTS1 GTF2A1L BMI1 SECTM1 TCEAL2 NSF PDE5A GAS7 SSPN GNPTAB DPYD STON1 PEG3 NEAT1 OLFM4 SOCS2 KLHL2 MAP7 CRLF1 DPM3 IRF9 COL9A3 LMO3 C9orf46 CYTL1 KIAA1310 MXRA5 DUSP2 PNMAL1 COL14A1 TCEA2 WFDC2 SPINT1 RNF115 CA2 DYNLT3 PDE7B CHL1 ABCA4 NR2E1 TMOD1 EDN3 REEP2 GPR137B CUX2 UBE2L6 VAV3 EPYC API5 ERCC4 ACOX2 FCGRT EHHADH PROM1 CTSH SOX2 KCNV1 PDE3A PDLIM5 SPINT2 S100A4 PRDX2 OGDHL ARSD DOK5 NMNAT2 MSRB2 UNC5C EVI5 SERPINI1 OSBPL10 PDE4B LEPR DLK1 MAOB PPARGC1A TSFM TSPAN1 ZNF423 SEC31B SLC4A4 ITGA7 SMR3B HIST2H2BE GPR88 NEFH MTA2 DIRAS3 ESRP1 TTC33 ASPHD1 PIGN LINC00339 PEX11A NUDT9 SPAG16 HOXC13 CREM ETFB RBP4
BMI1_DN_MEL18_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/BMI1_DN_MEL18_DN.V1_UP CSF2 CPA4 EDN1 CCND1 INHBE PTHLH LCP1 GFPT2 ADAM12 STC2 GAL PAPPA TEK ITGA5 ITGB8 NAV2 LAMB3 ADRB2 FAP CLDN1 C8orf4 PDCD1LG2 GREM1 INHBA KCNN3 ADM SLC7A5 FJX1 PLAT LSAMP ARL4C ASPH HBEGF C21orf7 TNFRSF9 GADD45A FOSL1 TGFB2 MMP7 ITGA4 LHFPL2 JAG1 COL16A1 TNFSF9 CSPG4 CXCL1 SLC7A11 IL7R ZC3H12A CHST11 NRP2 ATP13A2 CDH13 ADAM19 CD97 ITGA3 GAB2 KRT75 CSF1 VEGFC FAM189A1 ABLIM3 HTR1D LRRC15 LIF TFEC NTM MLL ABCA1 VNN1 SLC1A4 HAPLN1 FGF21 TNIP3 SIK1 KIF21B MICALL1 TNFAIP6 TIMP3 GDF5 C2CD2 PLAUR MICA NT5E BST1 COL7A1 TUFT1 PIM1 RUSC2 F3 ITGB6 HAS2 C3AR1 TRIO STX1A PLEKHO1 C6orf103 FADS3 TNFRSF8 NPPB PAGE1 TRIB3 IL1A MARCH3 ATF3 CHST3 PIEZO1 MGLL APBB2 NKAIN1 PIK3CG TAGLN SLC22A4 BIRC3 TMEM51 TACR3 WNT5B VLDLR ZNF639 BMP5 CDC42EP2 IL8 PSAT1 KCNN4 MT1F COL13A1 SLC6A9 ANXA3 PMEPA1 SLC19A1 ARL4A ADM2 PODXL ARNTL2 OGFRL1 VEGFA CRISPLD2 EHD1 ZEB2 WEE1 DUSP10 P2RX5 C2CD2L SCML2 KLF7
BMI1_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/BMI1_DN.V1_DN SLC17A6 TMEM176B EFHD1 KCNJ16 FOS SEPP1 GAS2 API5 IDH1 IFI27 CCKAR FLJ42627 DYNLT3 PLEKHA4 ID4 DPYD SEMA3E SFXN1 NMNAT2 STON1 CLIP3 TFF2 CYP11A1 PDCD4 BLVRB C1orf54 PCP4 ZNF423 ABHD8 ETFB PCDH8 PDE5A VAV3 SOX2 DDX60 TMEM176A CREM PRDX2 HOXB13 SSPN CDH22 KLF15 TSPAN1 SOCS2 TTC33 IL1R1 GPX3 MVP IFITM1 BST2 PID1 TRAF3IP2 GAS7 CITED1 GPR162 SH3BGRL SIM1 MAOB TRIM2 ISOC1 TP63 GPD1L PRPH ESRP1 HIST1H4H CLDN16 CA2 KIAA1310 NDRG2 EPHA4 SLPI TCEAL2 SSBP2 RPS20P14 EHHADH HIST2H2BE CES1 CTNNBIP1 MGC2889 ARHGAP15 TRPS1 RXRG LMO3 SNAI1 MSX2 SCNN1A COL9A3 NENF CHMP2B MYH13 WFDC2 SUCLG2 ARHGAP12 IFI6 GTF2I C17orf59 IFI44L PNMAL1 GPR88 EEF1A2 WNT16 GTF2A1L ALX4 PDE4B HIST1H3G CAB39 HS6ST1 PLS1 DNAJC12 EIF4B SNX4 ETV1 DOK5 TEX14 PIK3R3 LANCL1 SOD2 EGR1 PRPF6 ECH1 PADI2 COL4A3BP MSRB2 CTAG1A TRAPPC6A TNP1 DCTN6 RPL18AP16 PLAC4 TNNT1 BRCC3 PPARGC1A PEG3 TFAP2A LECT1 FAM76A LPAR2 S100A4 CHL1 WDR25 METTL7A BMI1 TSPO C2orf27A
BMI1_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/BMI1_DN.V1_UP PTHLH EDN1 HAPLN1 ITGA5 FAP LSAMP ADAM12 FJX1 COL13A1 TAGLN SLCO2A1 CPA4 SLC2A6 ADRB2 LAMB3 CLDN1 ATP13A2 GREM1 TEK SLC7A5 GPRC5A ITGA4 INHBA TNFRSF9 MMP7 SLC29A1 CSPG4 GFPT2 CD97 LHFPL2 ACTA2 PIEZO1 COL16A1 GAL BMP4 HBEGF CRISPLD2 CSF2 JAG1 CSF1 PDCD1LG2 C8orf4 NRP2 IL7R TGFB2 LCP1 SLCO4A1 PLAT TNFAIP6 SLC19A1 STX1A MMP3 EPHA2 TIMP3 FKRP MFAP5 TNFSF9 PSG5 GDF5 CTSS DKK1 SLC1A4 BMP5 LTBP4 TIE1 SEMA3G SIRPA FGF21 SLC29A2 FADS3 ITGB8 MLL ANXA3 SRPX2 VNN1 ANPEP CHST3 IGKC ABCA1 VEGFC CHST11 MICA DHRS3 MFGE8 FAM57A AGRN TAP1 INHBE TMEM62 CXCL1 F3 VLDLR ITGB6 GABRE SLC2A1 HAS2 LRRC15 CCL20 PANX1 FOXP3 PLXNA2 CTNS TRIO SLC1A5 FURIN FLNB KCNC4 PROP1 ASPH FES MICB COL7A1 ITGA3 TMEM51 STC2 CLSPN BDKRB2 C3AR1 CDCP1 POMT2 CCND1 CXCR7 C2CD2L CD82 MMP15 CSPG5 PODXL LRIG1 NT5E BST1 NOV FZD5 B4GALNT1 SLC5A6 LIF FGFR1 PAPPA GPR172A ATF6 MARCH3 KRT17 HOXB1 PMEPA1 TNFRSF8 LRP5 VANGL1 LEPREL2
MEL18_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/MEL18_DN.V1_DN PCDH8 IFI27 SLC17A6 PENK EFHD1 FOS TMEM176B CDH10 PCP4 SEMA3E AQP3 LECT1 ID4 STON1 CXCL14 KCNJ16 BST2 SEPP1 GAS7 AK1 SOCS2 C16orf80 TRIM2 GAS2 COL14A1 APOE SULF1 MIA CCKAR MAOB EGR1 GULP1 PLN TMEM176A CA2 OSBPL10 DDX60 IL1R1 B3GAT1 TSPAN1 EBF2 SMR3B IFI6 PDE5A LY6E DPYD DUSP2 EEF1A2 ACCN1 C9orf46 MAF TRAPPC6A UBE2L6 GPR137B A2M PPARGC1A TMOD1 PLEKHA4 VAV3 MAP7 PDE7B PNMAL1 TCEAL2 PCGF2 IFIT2 EPB41L3 IFITM1 PID1 OLFM4 PEG3 CRIP1 CLIP3 SLPI JUP TSFM IFIT1 SCNN1A MCTS1 EYA4 CUX2 DOK5 NTS CRABP1 DIRAS3 EGFL6 COL9A3 RGS2 FANCF UNC5C HIST1H4H WFDC2 FAM46A GPR88 GTF2I BAALC SLC16A4 PLCB1 C1orf54 TFAP2A OAS1 HOXB13 DIO2 RBP4 DDC PTER SIM1 ZCCHC24 FRMD4B BAG3 ALDH6A1 IRF9 ESRP1 GPD1L CDH22 ID2 SNCAIP ATXN3 BLNK SOX2 DMD EPHA3 PDLIM5 SKAP2 MVP SERPINI1 CREM CHN2 SYT17 GTF2A1L PKP2 FAM115A MPPED2 NDRG2 KIAA1310 PDE4B MGC2889 NMNAT2 PRPF6 GNG7 CRABP2 STK17B SH3BGRL PIK3C2B GLS2 VPS8 PHYH DLK1 PROM1
MEL18_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/MEL18_DN.V1_UP INHBE SLC7A11 CPA4 SLC7A5 ADAM12 PTHLH CSF2 TNFAIP6 GAL FJX1 KIF21B CCND1 LTBP4 ITGA5 JAG1 KCNN3 EDN1 STC2 VEGFC SLC1A4 MLL PAPPA LAMB3 ASPH LIF CSF1 GFPT2 TFEC EPHA2 ADAM19 INHBA STX1A HBEGF NRP1 IL7R FGF21 PMEPA1 WNT5B C3AR1 COL7A1 BDKRB2 PDCD1LG2 HAS2 COL16A1 TEK MEOX1 LEPREL2 GDF5 FURIN PLAT ARL4C PLAUR C2CD2 CRISPLD2 TNFRSF8 ATP13A2 TNFRSF9 MMP7 NRP2 P2RX5 CXCL1 SLC19A1 SPP1 SLC2A6 MMP15 CHST11 NTM TIE1 PIEZO1 FOSL1 FAP SRPX2 CA12 ITGB8 TNFSF9 SLCO2A1 C3orf52 AGRN TGFBR3 SLCO4A1 CTSS TMEM51 SLC6A9 NT5E ADM LHFPL2 SLC1A5 ITGA3 CDH13 ITGA4 FADS3 SLC16A6 MT1F CD97 SIK1 F3 GPR3 HLA-DQA1 VLDLR TAP1 ERO1L PYGB MICA ABLIM3 DDIT4 PLXNA1 TGFB2 CLDN1 C2CD2L VEGFA CSPG4 ITPR3 SLC29A1 CDCP1 FZD6 ZC3H12A CHST2 SUN2 VNN1 DDX11 KCNJ15 ABCC5 SLC22A4 GNB3 ECM1 STEAP3 MICB TYRO3 GREM1 CD83 LCP1 COL13A1 LRIG1 WISP1 CLSPN LPL HS3ST3A1 ENTPD6 C7orf54 CHST3 CACNG4
PTEN_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PTEN_DN.V1_DN SERPINB2 PTEN KRT81 CORO7 HLA-DPA1 KRT23 HLA-DPB1 RFTN1 PNMA3 CXCL11 FMNL1 ST8SIA3 TNR TAS2R10 PRKX PTENP1 ATXN3L SEMA4D KIAA1024 NDST3 PRSS3 HMGN5 UGT2B17 ITGB1BP3 DNASE1L2 FST DGKB PYCARD IL19 TLE6 ARL17A GNG11 SH3BGRL CD3D C1QTNF1 ACOX2 SETD1A C7orf10 WISP3 SV2B GALNT14 C16orf45 SLC5A4 HMGCS1 NEB PIK3C2G P2RY14 HPCAL4 PAH HLA-DRB1 FGR ADCYAP1R1 SCN10A IFNA21 TPPP3 PRSS2 LCP1 CHI3L1 CXCR6 SERPINB3 LOC646541 PON3 NRN1 ULBP1 FOLR3 RLN2 RFPL1-AS1 OPRM1 MGC12488 UGT8 PRTN3 HOXB1 NPPB PRO1848 SPRR2C ACSBG2 HLA-DRA ABCA6 MAGEC2 ZRSR1 CDO1 SERPINA10 CAND2 MAMLD1 SGCE SERPINE2 B4GALNT1 FARP2 DMP1 TBX3 ITIH3 MATN3 GPM6A C8orf59 MTUS2 CDH10 ANKRD53 MC4R TMPRSS6 CLDN10 NR3C2 CYP4F11 MSX2 CA6 HLA-DRB4 MRPL41 KLHL28 IL17A LIN7A GABRB1 ATP8B3 FOSL1 ADAM2 SLC22A18AS SLC14A1 ASIP CDH11 FJX1 MLANA VIM FLJ43663 CCT8L2 XK ZNF667 LILRA6 TGFA AGXT RARRES1 KCNJ10 TBX1 DUOX2 SV2C CAMK1D CDH22 PROX1 HLA-DMA ZNF132 FBXO17 RTDR1 KRT14 HS3ST1 TSPAN7 EMP3 ZNF556 NOL10 KCNIP1 IL18RAP GJA10 ATG16L1 CD97 CCDC68 KLRD1 PDC WNT16 IL1RL1 ETV5 C4BPA CHST10 CLDN14 BTBD18 CHST7 KCNJ4 ADCK4 HAAO KCNMB3 ODZ3 SELL PTPRCAP HLA-DQB1 CAMK1 EIF1AY DEFA4 B3GALT5 FCN3 KIAA0087 PSMB9 ANKRD34C LUM HIST1H4D HEYL INPP4B LOC399904 CCL16 CPLX2 ALX3 OLFM1 TWIST1
PTEN_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PTEN_DN.V1_UP EEF1A2 INHBB NEUROG1 C16orf5 DMRT1 DOK5 PRR16 HSPA12A CCDC102B B3GAT1 ZNF613 IFNA6 MIA ALOX5AP BMPR1B HTN1 ZBTB10 MAN1A1 P2RX6 LYPD1 RASL12 H2AFY2 SLC30A10 TCHH HTR2C SCEL PTPRZ1 CAMTA1 PRKAR2B GLT8D2 EPHA4 FCER1G NYNRIN HOXB2 DEFA5 C8orf17 KCNQ4 RBP3 CAPN11 TMEM151B LGALS13 SPOCK1 BCL2L14 NR2F1 SSBP2 FGF1 HOXC8 SEPP1 AZU1 FNBP1L C5orf13 CLPS GEMIN7 GADD45G CNTD2 HIST1H1T PCDHB12 GABRA5 SLC6A1 CYP11B1 IFNA4 TSPAN2 SHC2 MAL LPPR4 EVI2A CSH2 PLCE1 INSL4 TCF7L1 MYOT PGR CYP26A1 GALR3 ASPN PSPH KIAA0125 LAMC3 TUBB2B MMRN2 C11orf16 WISP2 MYBPC1 UCHL1 PRDM14 ARHGDIG SIT1 BMP10 BAI2 ADRA2C GGTLC2 TMLHE GNAO1 PARK2 CYB5R2 ZNF22 PCDHA5 JAM3 FAM49A EMID2 NAP1L3 CD27 HS3ST3B1 CD1E ITGB2 NFASC EDN1 IFNA17 HOXD1 RSAD2 CPVL DSG3 OR1A2 GDF10 CDKL2 MYO15A SPOCK2 FAM46C SLC16A7 PFKFB4 HPR LHX2 KCNH7 IRF9 SLC26A4 CNR2 PTPRJ C5 SPTA1 MOSC2 KANK3 RGS2 ASAP1-IT1 LRRC19 GJC2 VCAM1 C2 DEFB1 MEFV NR4A3 CLEC1B ATP6V1B1 RARB MSC CYP39A1 EFNB3 PRG3 HHCM GPER CHRNB1 IL33 CELSR2 MSMB TXNIP RTP4 LOC644872 SLC9A2 COPG2 KIR2DL4 HTR1B TONSL TNNT3 TGFBR3 PRSS50 CLTCL1 ACSS3 KLK8 NGB MX2 JAG1 KLRC4 MAP3K5 LRCH1 COL15A1 KALRN ADRA2A SORBS2 TUSC3 BDNF PDZK1 PAGE4 NTNG1 LOC642733 PAX3 BMP7 GAL3ST1 OSGIN1 AQP1 DCC SRA1 TLE1
NOTCH_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/NOTCH_DN.V1_DN CR2 ID1 HES1 GPR68 NOTCH3 SLPI DDX4 ARSD MYCN CRH CCDC70 ABCB9 SPRY4 PPFIA4 LY6G6E MRM1 ABCA1 FCN1 BAIAP2 FUT3 AIPL1 KLHL12 PSPN WIF1 KLF2 RASSF8 C9orf3 FCGRT TMEM92 LMTK2 ZBTB16 ITGA7 SHC2 SUSD4 TMEM132A CD27 SPANXC SLC45A2 SLN CA8 LPAR6 CNGB3 CHST1 CD82 LZTFL1 CST1 CLSTN3 ITGA9 CA4 AMOTL2 GZMB GPR32 CPNE6 MYO1D SH3TC1 HOXA3 LOC391427 MYO1E TBX3 ALLC IL11 RAMP2 CIDEB KIAA0125 RCBTB2 TBC1D29 FAT2 TRPV6 LOC339524 MYO1A TUBB2B SLC28A3 GPR65 SEMG2 KCNE1 SP140 KCNA5 IL7R VPREB3 CD209 MMP25 TM4SF20 MAGEC3 KRT9 TMPRSS6 CHRND CRHR2 LY6G6C IPO8 LHX6 C3orf18 MAPK13 KLF15 ICOS VNN2 OGDH VN1R1 EPB41L4A PROL1 IGLC2 ORAI2 GNAT3 ZSCAN5A CYP7B1 TRGV7 CA2 RHO ZNF221 UTF1 NSUN6 OR2H1 ZNF74 FSTL3 DOC2A HCRT CXCR3 BBOX1 C15orf31 LOC57399 CLIC2 SPRR2B ORM1 KCNA1 RPL39L TNFRSF8 CRMP1 LGALS4 ZC3H12A CAPN10 GUCY1A3 CYP4F2 ID4 RAB3IL1 PPARGC1A FIGF E2F2 TRPC3 GUCA2A PGLYRP1 MAN1A1 GPR15 CXCR7 DRAM1 ZFP37 PRO1621 MYO7B SCNN1A BCAS1 PTCRA PBOV1 FAIM KCNN1 SERPINE1 SELE TNFSF10 PLAT C6orf105 DNAJC3 GABRG3 IL26 GGTLC1 PHKG1 ATP8B3 HS1BP3 CHIA FMNL2 DIO2 DLK1 DCLK2 POF1B TFPI2 LRP4 IFI30 NID1 ACADL SNED1 CCDC81 PKD2L1 ADCK4 PPIEL SAMD4B HLA-DRA INSM1 ARHGAP6 AKIRIN2-AS1 SHCBP1L CCNK C3AR1 CEL
NOTCH_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/NOTCH_DN.V1_UP RAG1 FARP2 ANKH C1orf106 ADAMTS1 MEFV SRGAP2 CDHR1 DAAM2 CDKN1A GRIN1 PPEF2 KCNH2 ZNF230 TPPP AMPH IFIT1 TNNI3 NR6A1 STAT2 RHCE LHCGR CNTD2 WBSCR23 CRYGC CRIP1 ZNF323 FKBP9 CCNA1 MN1 C3orf27 C6orf15 TFDP3 GABRR1 SLC5A4 SCTR PGP LOC652147 CHRNA4 ABTB2 SLC17A9 KCNN4 ZFP112 RFPL1 DGKI PROC ODZ3 BARX2 RNF39 ANXA2P3 ANGPTL7 KLHL26 RRAD NPTXR COL4A1 NPY6R MYF5 PAIP2B P2RX3 CDHR2 CHST8 SLC9A7 MFSD6 FYB GNG11 SDPR HSPA1A KIF13B UPB1 C9orf31 PIAS3 SPTBN2 BHLHB9 RGS2 GTF3C5 WDR7 INPP1 LCE2B KCND1 PPP1R13L RAB23 CPA2 LOC440334 STARD8 LMAN1 CRYM HMOX1 RDH5 CALB1 TUBBP5 LEPREL2 SYT12 C8B CA5B ANGPT4 LMO3 RAG2 CASKIN2 DXS542 RPS6KA4 CTF1 LOC651803 TLX1 PRKG1 PKDREJ CDC37L1 TTC21B RASGRP1 SCN8A IQCC GSTA3 HTN1 KLHL21 DLGAP1 DCLRE1A KRT8P12 CLMN CPEB3 EFNA3 LDOC1 KLRD1 MTG1 FLT3 HHLA2 KRT18 TGFBR1 MAP3K2 FOXP3 PNPLA3 PF4V1 DPT RP2 GUCA1B SLC30A10 GDNF HABP4 NEUROG3 S100A8 HPCAL4 AGXT2L1 CLDN16 AIM1L CTDP1 PLA2G7 PRKACA ADAP1 TNS1 GPR56 KSR1 DHX32 FGF16 YBX2 ZNF671 OR10H3 BBS10 CDKL1 CIB2 ITPKC TMEM59L RUNX2 FGF13 DGKE CDKAL1 PRSS50 C9orf38 NEU2 SLC6A14 MAP3K1 ZBBX SLC5A1 NME5 TGFB1I1 PIM2 C17orf88 ATP1B2 KCNK12 SETD1A C20orf46 ZNF507 SLC39A4 NYNRIN NPTX1 P2RY1 CPB1 TNFSF8 ESM1 EPN3 SSH3 NAT6 ATP8A1 ASB9 RANBP17 BTG2
EIF4E_DN http://www.broadinstitute.org/gsea/msigdb/cards/EIF4E_DN LRBA SVIL CLDN23 TPD52 KLHL21 ESRP1 PTGS2 MYH10 MIOX TRIP11 FAS UBA7 ITPRIP CWC22 FNDC3B CTSC VPS13C SNAPC1 SH3YL1 CCAR1 APPBP2 FZD3 COL4A3BP PTER NPEPPS KPNA4 DIP2B FXR1 SCAMP1 EPDR1 STRBP CYP1B1 TP53BP2 CASP10 KIAA0196 CLINT1 C2CD2 PLAU NKAPL NCOA7 SIK3 CNKSR3 UPF2 DENND2D FRMD4B MMP9 CLTC PHIP TRIM47 OFD1 PRRC2C FUCA1 SORT1 SEMA4D TP53BP1 DCTN4 NCOA6 MCPH1 LOXL1 TP73-AS1 SDR16C5 SAA4 IQGAP1 MKL2 SQRDL PDK4 PRDX4 MYO10 C3 C3orf19 TSPAN6 GALNT5 IL36G ARID4B PRMT10 RCBTB2 ALPK1 NEDD4L ADAM9 SLC46A3 WDFY3 STAT5A PARP8 ARHGAP32 TBCK PLEKHA5 DOCK1 MGEA5 USP47 CD55 FAM160B1 TNIP1 ANGPTL4 LMO7 GATA6 MAP3K5 SGPP2 SAA1 RANBP2 EP400
EIF4E_UP http://www.broadinstitute.org/gsea/msigdb/cards/EIF4E_UP DNAJB5 PPCS TALDO1 NDRG1 FBXO4 MRPS35 LAMC3 STRA13 TMEM11 FBXL13 KCNC2 HAUS7 CARTPT PFDN2 ZNF576 IDH1 AHSA1 ZBED2 SNTB1 MTX2 C4orf37 SNRNP25 MGC50722 C20orf30 FN3KRP MON1A NPM3 C16orf91 MRPL17 MAP2K3 TAX1BP3 SSSCA1 ISOC2 FABP7 NUDCD2 SRXN1 VPS72 DPY30 FOXD2 MIRLET7BHG DOM3Z OSBPL10 MAPK8IP1 ATP5J2 PTS ANKRD16 EIF4A3 CKMT2 C16orf53 SNX8 VPS28 DEDD TST BOLA1 NKX2-8 PNO1 METTL1 CNTN4 TUFM CFHR1 UROS ATP8B3 CAMK2N2 UBL4A RSAD1 C6orf226 FAM65C KLF8 UCHL3 MRPL30 LST1 GEMIN6 C8orf33 JOSD1 ACYP1 CHCHD1 VIPR2 MDH2 PMM2 NEGR1 MYH6 NOP16 BMP3 MS4A1 IL18 TP53I11 NTPCR C6orf108 ITPK1 PRSS1 FETUB RGS3 UBFD1 GTF2H5 CACNB3 SLC25A30 FKBP1B AGXT2L2 TAF11 FAM117A
CRX_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CRX_DN.V1_DN RBP4 TECTA FABP7 SMOC2 TNFRSF12A CADPS2 APOBEC2 TUBB6 RXRG CCKBR GFAP SOCS3 MYOCD SERPING1 INHBB CEBPD INSM2 SERPINA3 GULOP TMOD1 PCOLCE B3GNT2 NUPR1 NAB2 WWC1 RGL3 JAM3 GLYCAM1 PLEC SLC26A4 LRRC4 S100A6 TMEM176A GNG11 OSMR STEAP4 BCL3 ANXA2 CHRNB4 KLF10 ACBD6 NFKB1 LXN GLIPR2 TRPC3 BACH2 DDX3Y PLOD2 CHRNA3 JUNB ATP8B2 FKBP5 LECT1 CDKN1A CSN3 TRIM13 FRMD6 C1QC DCAF4 ST3GAL3 RGNEF INSM1 ACSS1 IRF5 SEL1L3 EYA1 PYCR1 TNNC2 KSR1 SMPDL3A CDH20 COL16A1 LAD1 HSD17B2 ZDHHC14 TLE1 CHAC1 CXCL13 EGR1 SPSB2 TCTE3 MYOZ1 RNASE4 FMO3 TAGLN2 LIX1 TIMP1 CLRN3 TMBIM1 FABP5 LIN28A SLC22A7 H6PD PTER CAPN12 SH3BP4 CD44 CEBPA EFNA1 SPG21 DHX32 SKAP2 RAI14 HNF1A PLAT PRDM1 FMN1 ZNF474 MFSD4 NAB1 KDELR3 TNFRSF13B TGM2 C1QTNF6 CALCA PHOX2B CRYBG3 CEBPB DUSP16 CTNNAL1 SEMA5B PHOSPHO1 LDB1 CAMK2B GDAP1L1 FOXD1 MPP6 PCSK2 PPP1R14A GHRH MAP3K8 S100A16 COL4A2 FUT4
CRX_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CRX_DN.V1_UP OPN1MW AQP1 RNF207 KCNJ14 RS1 WISP1 SH2D1A PDE6H ARG2 NXNL1 ANKRD33 PDIA5 GUCA1B REEP6 TNFAIP3 OPN1SW HCLS1 HSPA1B VTN MEF2C CABP4 SLC17A1 ESRRB KCNE2 PRPH2 SERINC4 ALPL GPSM2 DOHH PLEKHF2 GAS7 SNTG2 SLC24A1 PFKFB2 RPGRIP1 RTBDN GNAT1 DPF3 PPAP2C MC1R COL19A1 GRTP1 PPP1R42 RDH12 POLG2 RPE65 ARHGAP10 WDR31 IER3 BUB1B RGR KRT18 SGCG GCKR CLDN7 WDR78 SELENBP1 C14orf37 LOC253039 CDR2 FAM161A FAIM DOCK8 TMLHE RCVRN SNTB2 SLC25A25 LLGL2 MYLK XIST HSPA1A ABCA4 BST1 RDH5 C16orf74 BMP15 ALPK2 TMEM229B MDM1 KLKB1 RHPN1 DHH PLA2R1 UBXN11 PPP3CC AGR2 CSGALNACT2 TMEM27 STRA6 NRM INSL5 STK17B PAQR4 TCP11 SYNPO2 NXNL2 B4GALT1 ST8SIA1 STK35 RNF123 CKMT1A SH3YL1 NAT1 OSGEP DUSP14 ONECUT1 MMP23B GRK1 DDHD1 RABGEF1 PDE6A CCDC107 GPSM3 JAG1 TMEM218 PTPN21 UBTD1 C11orf9 FAM107B SNTA1 TRAFD1 TMEM35 RAD51 RANGRF PACRG BATF2 FAAH ZFP57 ZDHHC12 BCAR3 SP6 GZMM TTC39C CCDC64 SUV39H2 TAOK3
CRX_NRL_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/CRX_NRL_DN.V1_DN ERMAP TMEM87A FABP7 ADRB2 TNFRSF12A TMEM158 PDIA3 EYA1 MYOCD CCKBR WWC1 RERG CHRNB4 INHBB CAP1 TNC CNGB3 RASGRF2 GULOP RGL3 SMPDL3A ARPC3 RBP4 PTER GDPD3 ATOH7 EGR1 ENC1 MTNR1A TRAPPC3 JAM3 ELOVL7 RTKN2 SDC4 MFNG PRDM1 ADAT2 NR4A1 RNF149 BSPRY RNF25 PTPN13 TNNC2 HRASLS CPLX2 DFNA5 INPPL1 CHRNA3 FAM134C KIF5C C19orf39 CCDC23 MYBPH C14orf132 KLHL1 HS3ST1 HIST3H2BA DNAJC9 NMBR AP2B1 RAB27B PLEC CITED1 METRN GTF2I DDX3Y C11orf52 IL17D QSOX1 ZNF316 PRMT1 XK SLC26A4 RXRG ZNF146 SPINT1 CLIC4 LRRC4 ACBD6 INSM2 KAZN SALL3 NTNG2 GABRA2 FRMD6 PNP BAMBI U2AF1 FZD5 LSM12 TNPO2 TSPAN33 GGT7 FMN1 PYGM NTN4 MFSD4 SGCE BAX NIN PVRL3 SLC25A13 PAM TMEM106B ZNF600 GPR124 NFKB1 ECE1 ELOVL2 D4S234E RASA2 HEBP1 HES5 CLPB GREB1 ASPH MINA CRYBG3 ABCC9 GABRA3 DPRX CDH20 CAMK2B GRIK2 TCAM1P MCART1 RREB1 CTBS RBP7 A2LD1
CRX_NRL_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/CRX_NRL_DN.V1_UP NRL CNGA1 GNAT1 KCNJ14 OPN1MW RHO ESRRB SLC24A1 NXNL1 PDE6A AQP1 WISP1 SAMD11 CDR2 RNF207 LRRC2 PPARA ALPL EDN2 REEP6 DRD4 NR2E3 PLEKHA2 CABP4 PDIA5 SH2D1A RHPN1 BUB1B GPSM2 EPS8L1 POLG2 ARL4D SLC16A6 DHRS3 ARHGAP10 PPAP2C HSPA1B COL19A1 ANKRD33B IMPG1 ZFP36L2 GRTP1 ARG2 MEF2C RS1 TNFAIP3 PLA2R1 KCNE2 RFX2 CCDC64 SNTB2 TNIP2 SNTA1 SNTG2 B4GALT1 BST1 SEC14L2 TTC39C DOHH IER3 GAS7 MEST CDKN2C MYO7A HCLS1 DPF3 REC8 GFAP SLC25A25 MLF1 PPARGC1B CROCC LOC253039 KLHL36 PIP4K2C MC1R GUCA1B ST8SIA1 EXT1 CRYGB DIAPH3 LLGL2 XIST FXYD6 PTPN18 FAIM ZC3H3 ABHD14A TNNT2 WWTR1 HSPA1A TAOK3 RTBDN SLC5A5 KCNB1 C10orf99 DHH SYTL1 CKMT1A RNF123 SLC16A3 ZDHHC12 SLC29A2 NXNL2 ATP8A2 ACVR2B MOGAT1 C10orf47 SERINC4 TCP11 CRYBB1 AHRR BBS9 SAP30 NRM PCOLCE CTIF CCDC107 BEST2 RDH12 BCL2L11 GALNT10 ABCG4 UBXN11 PAQR4 GADD45A STK17B PDE8A PSD TFF3 PPP1R42 TENC1 ST3GAL1 CAMK1D PRKAB1 ARMC1 TNNT1 MLL3 KCNN4 SSBP4
NRL_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/NRL_DN.V1_DN FABP7 CLCA3P PDIA3 CCKBR CNGB3 BSPRY RGL3 QSOX1 GULOP ARPC3 NR4A1 RASGRF2 EN2 MYOCD SLC8A3 WWC1 TRAPPC3 NFKB1 RNF25 MOXD1 JAM3 ARHGDIB AP2B1 MFNG DFNA5 CPLX2 ADRB2 DPRX FAM134C RXRG ACBD6 HRASLS ERMAP GTF2I SMPDL3A WDR31 EYA1 METRN PIK3AP1 SOCS3 ZNF146 PRMT1 PLEKHH2 ECE1 HIST3H2BA C19orf39 DNAJC9 INPPL1 MPP6 ORAI1 KIF5C GZMM GREB1 D4S234E C11orf52 PNP GABRA2 U2AF1 CLPB PRDM1 GJD2 TOM1L2 GPR124 RNF149 ST3GAL3 HES5 BAX LMNB2 SLAMF9 CTH ZNF316 ABCC9 ELK3 TRIM17 CASP7 PDE1C IL17D GGT7 FKBP9 CLIC4 ALDH2 HARS2 MOGAT1 IFITM10 PLEC ELOVL2 DYSF PTPN13 ADRB1 CRYBG3 NOXO1 TUFT1 PARVG MINA TTLL1 CDT1 DYNC1LI1 CALCA ATE1 BMP15 ABHD3 BBX CLIC1 SUPT16H ABCB4 DIXDC1 TMEM158 USP25 RGS20 TMED9 BST2 ATOH7 MAP6 PRKCQ TSPAN33 RNASE4 RAB8A RASA2 DPP8 CTBS CCL2 SLC25A13 PECAM1 C14orf132 GLRA1 SLC7A3 GLRA3 SALL3 LAMTOR2 TNPO2 BMP5 TC2N ATP2A1 EPM2AIP1
NRL_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/NRL_DN.V1_UP CNGA1 NRL GNAT1 NR2E3 KCNJ14 WISP1 RHO ESRRB AQP1 PPAP2C PLEKHA2 SLC24A1 PDIA5 PDE6B SH2D1A SAMD11 POLG2 RNF207 LRRC2 EDN2 SLC16A6 COL19A1 LMO1 RFX2 GPSM2 DHRS3 TNFAIP3 ZFP36L2 CDR2 PDE6A SPEN PPARGC1B MEF2C EBPL EXT1 REEP6 ALPL MC1R GALNT10 C10orf99 BST1 ST8SIA1 PCOLCE GADD45A MLF1 ST3GAL1 PPARA MKNK1 FAIM SNTA1 CALU TFF3 CCDC64 TNNT2 SEC14L2 DPF3 GRTP1 TTC39C LAD1 SNTB2 GAS7 PRM3 IMPG1 C10orf47 ACVR2B GRIK5 TCP11 CALN1 ARMC1 GRIP1 KLHL36 STK17B PLA2R1 KCNB1 HAS1 LLGL2 RHBDL3 POLR2A RHPN1 NME4 NXNL1 CCNA2 TRPC1 SHISA2 BCL3 DUSP14 GNB1 SNTG2 ATP8A2 ARHGAP10 FOXH1 TAS2R4 ZC3H3 ARG2 NLGN2 MLL GALNT7 SLC29A2 IGFBP5 STYX CDK5R2 SAP30 NGDN BCL2L11 DIRAS1 AHRR PPP1R3A TAOK3 CLDN23 PTPRCAP MLL3 CNOT3 PLAGL2 BBS9 SCN2A KCNN4 TNFAIP2 EML3 CRYGA ELAVL3 IRF6 B4GALT1 SOX15 HIC2 CSDC2 STK35 CTIF STARD10 NUF2 APC2 SEMA4G SLC26A8 PLEKHF2 IL1F10 ZDHHC6 SUPT6H
RB_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RB_DN.V1_DN BHLHE40 CHAC1 HIST1H2BC SQLE TNC AGRN TMEM66 PLXNA2 ADAMTS1 CREB3L2 MOXD1 IL33 NDRG1 EIF4E LGALS9 CST9 ADAM12 RPS2 DKK3 MVP DDIT4 BST2 DYNLL1 DUSP14 HSPA5 WNT3 TLL1 GADD45A NEDD9 HIST1H2BD CD9 SH3BP5L SLCO2A1 BNC1 TMCC3 PSME1 MSMO1 DDX3Y FEZ2 KRT8 DDIT3 COL18A1 CCRN4L PPBP RB1 FURIN UROS TMEM140 NFIL3 GJB2 C5orf62 IGFBP3 CALCB S1PR5 LAMB3 SLC7A5 SEC23A GOSR2 PDGFB CAV1 NSDHL ANXA6 FHL1 S100A16 PSMB10 BCCIP MMP13 TUBA4A CTNNAL1 CISH CDIPT ST8SIA2 TMEM50B DNAJC4 TMEM42 NKAP KRT7 MMP9 CELSR1 C10orf99 MICAL2 F2RL1 RASL11B HS3ST1 CAP1 AGR3 TTC15 ARL1 C18orf32 CYTH1 FLNA P4HA1 PDCD6 BASP1 SLC7A3 ANKFY1 FAM102A MYADM LAMC2 LIFR H19 UNC119B CTSC ANKRD40 EFTUD1 LAMTOR3 LMAN1 STC2 SERP1 ATF5 UBA5 CDC42SE2 RHOV CXCR7 SERPINB1 IRX4 LRRC4 USP18 CD44 ANXA11 KIAA1161 STARD3NL PPP2R1B PSME2 PRKAR1A PMVK
RB_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RB_DN.V1_UP PMM1 DCXR NME4 DAK SLC7A7 C14orf159 MRPL45 ADA SPOCK1 TIPIN GNB1L THRA ZSCAN22 FXYD6 EPHX1 ZFP30 MRE11A CTC1 RPA1 NOXO1 POLD4 SULF2 AKR1C3 SLC2A8 DDIT4L C9orf169 IL36RN TPRA1 DNMT1 CRIP2 BTG2 FAM92A1 TMEM54 PCBP2 IFT27 MCM6 GCLM MCMBP CCNE1 SLC35B2 SPICE1 EI24 CTDSP1 ARTN PALMD HAT1 DSN1 ARHGEF40 MDM2 AHCY DUOXA1 RFC3 BBC3 LYNX1 SLC2A9 HEATR5B NUMBL RAD54L ID1 NUDT5 HEY2 RP9 PRKCE C12orf24 PRKAB1 CCNE2 LAGE3 VPS16 TNFSF9 TGM1 TNFRSF18 RAD51C SNAP25 ZW10 DNAJC9 MANSC1 CCDC88C AAAS FBP1 PEX11B POLE2 STUB1 ZBTB2 ALPK3 SLC24A1 NANS TYRP1 C20orf27 MAN1B1 PRIM1 DNA2 BAZ1B PMS2 ACOX3 IER2 FAM118A SLC25A42 STMN1 TUBG1 MCM7 PCDH10 C17orf79 DCT MRPL49 PPM1M PDXP SMARCA1 PLEKHA6 GANC TIMELESS ST3GAL4 MYC ZNF688 PLXNB2 PLA2G6 ZBTB8A SFRP1 CLN6 GRM8 MSH6 SLBP PCNA TTI1 OVOL2 SIVA1 EMR1 GAB3 PKHD1 DNASE1L1 MAPK13 UBE2T LCMT1 RRM2 UCK1 GRB7 HES1 NXT1
RB_P107_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RB_P107_DN.V1_DN TXNRD3 MBNL3 NSUN2 RARS STX7 ACP5 GJB2 NFE2L1 ELOVL6 C4orf43 BDH1 PMM2 EFTUD1 EIF3C PINX1 NARS SLPI LAS1L NUCB2 AP3D1 NRBP1 TDRD7 PRND COG6 ELOVL1 PGD NMI BLCAP TPRG1L UNC119B RHOU COASY HIST1H2BC ANXA1 CTSL1 TLR2 BIN3 SIGMAR1 GUCA2A SRI PDCD6 UBE2G2 GBE1 LPAR3 APTX IARS LACTB2 BCCIP S100A16 SCD PTPRE CAP1 CRABP2 SLIRP DAD1 POMP PIK3R4 ANXA4 HSD17B12 PLEKHA7 KRT7 CXCL12 STAT6 MYO1D CCDC90B DDIT4 RSRC1 TXN2 GNG12 LPGAT1 MOGS C3orf70 PANK1 PEX3 RDH11 S100A8 S100A9 RNF25 AIMP1 NIPSNAP1 EDN1 NFE2L2 GALNT11 UBA5 ARL1 DYNLL1 AARS PLK3 PAFAH1B3 NME7 POR ACADVL CLIP4 ERCC3 TARS SAR1B GLRX DGAT1 LPCAT3 BSDC1 C10orf99 UROS ARPC1B CHAC1 PPBP PTPN9 C9orf103 C6orf203 HIGD2A POLR1E POLR3G COQ9 RBM8A CBR4 PEX19 KRT18 PHF8 KRT79 COA5 AKAP9 SERPINB1 UBE3B SPG11 GSTA4 SYTL1 PRSS12 KIAA1147 PPA2
RB_P107_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RB_P107_DN.V1_UP PRC1 PAQR4 BICC1 COL1A2 FBLN2 SNCG PTMA FSTL1 SI RFC3 CDK2 MAD2L1 CDC25B TCF19 NCAPH TRPV2 RPA3 WDR90 LGALS3BP PCNA DNAJC9 LOC202152 RRM2 RPL39L CHAF1B MFGE8 CDH11 COL5A1 CENPH GMNN MCM6 COL6A1 NAA40 ACTG2 CENPK ANAPC11 RRM1 EDN2 PRDX4 TEK FEN1 KHDRBS3 MCM7 H2AFV E2F1 HMGN2 CD81 NXT1 TAGLN COL1A1 SYCE2 HAUS8 NCAPD2 RDBP SRPX2 KIAA0195 FBLN5 ORC6 CDC45 DHFR POLE2 ASF1B PRIM1 NRM BGN CES5A STMN1 H1FX UBR7 TSSC4 RPA2 GSTM2 IPO9 CCNF VEGFB TUBG1 COL6A2 TCFL5 RPA1 COX6B2 CDKN1C WDHD1 CCNE1 TYRP1 SLIT3 GTSE1 POLD1 CD248 RBPMS2 PCOLCE FBN1 DUSP1 CCNE2 FANCA PIDD LYPD1 KIF4A TRPM1 HEXDC PML BLVRB RHEBL1 MCM5 SPIRE2 CDH2 SLBP KCNA1 E2F8 FANCL EFS FKBP10 RFC5 LIG1 LOXL1 INCENP CA2 BEX2 ETHE1 PATE4 LCK C3orf37 SERPINF1 TMEM119 SIVA1 RFC2 DCLRE1A ABAT NSMCE2 COL16A1 S100A4 SAMD10 GINS4 DNA2 POLE MCM2 PRIM2 DYNLT1 TMEM45B DCT MRGPRF
RB_P130_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RB_P130_DN.V1_DN USP18 C2orf18 STAT1 APPL1 SEC23A SELK ARRDC4 KLK6 GPCPD1 PNRC2 IDH1 TMEM87A C3orf70 SLC2A1 TXNDC9 IDI1 KRT6B CTSB DDX46 LIFR AKAP9 ANKFY1 CTSC RASA1 PARP9 DSTYK DNAJC1 COPB1 TXLNG OLR1 PYROXD1 RRAS DYNC1I2 ATAD1 KRT1 IFITM10 HK2 DDX1 HSPA1B EVI5 TMEM140 CLIP1 C9orf72 ZDHHC20 GAS5 PRPF38B KLK7 BNIP3 PCDHB17 RB1 DDX3X ERAP1 GADD45A NCL CASP6 UHRF1BP1L C4orf34 CAPZA2 CLU HLA-G GLO1 ASB13 RHOV GABRP EIF2S2 ZMPSTE24 TYW5 LLPH VDR EBPL C10orf99 GNS ATP9B NAB1 VOPP1 USP47 FBXO28 RCN1 STAT6 SCEL CTSK SEC24C CHMP1B AVL9 GDPD3 MFN1 KIAA1161 SLC10A6 PVRL4 ABCG2 RNASET2 KIF16B ARHGAP24 SPOP KIAA1539 GJB2 GNAI3 DSP DEFB1 KDM5B FAM32A NRARP MORC3 CXCL12 LAMP2 UBXN4 ESF1 WDR26 LGALSL TMEM123 SPG11 EIF3J TOMM34 SCAMP1 SMEK2 DNAJC7 CSDE1 B2M C17orf62 HTRA1 RAP2C C3orf64 RAB24 PTPLB SH3BP5L GUCA2A KRT10 ATP6AP2 RAB8B SNX2 TFB2M SOX21 PLBD1 NEAT1 RRAGA CD1D LAMP1 KRT79 BNC1
RB_P130_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RB_P130_DN.V1_UP CASP7 ANAPC5 PF4 TK1 GPN3 POLD2 RAD51D FAM64A TWIST2 BIRC5 IER3 HINT1 C11orf31 MYLK GFER PIWIL1 C16orf48 SEMA5B UBE2C CHCHD7 AQP5 GREM2 EXOSC2 SGSM3 C12orf10 CMTM7 CRLF1 KAZN CDC7 TMEM151B OAF PDZK1 AURKB CUEDC2 NPPB ATP2A3 RASGRF1 KIF22 GC FADS2 AURKA PPP1R15B SIM2 NSMCE1 CRB3 TRAF4 RUVBL2 PARS2 POLR2I C17orf90 RGL3 SNRPB RHOJ TAL2 ABCG4 GLIS2 ZBTB12 FST RENBP COL11A2 TINAG ART1 FOXI1 FGF10 RABEPK SNN ERG CHCHD6 ZBTB17 LSM4 ELOF1 LITAF ADCK3 CYBA RSPH9 VSIG2 C7orf70 C9orf89 AVP STMN3 SDF2L1 HMGA2 CACNG4 RACGAP1 SNRPC HYAL3 NKD2 SULT1B1 MYOZ2 RGS16 SLC29A1 RASD1 SLC11A1 C11orf71 ICA1 MRAS SLC7A9 ALK NXNL1 CCNB2 QTRT1 ORC1 H2AFB1 EIF1B SIM1 SLC43A3 SPATA13 DUSP13 RASA4 PCSK5 CRTAC1 ZNF428 SEMA6B KIF20A B4GALT4 GRTP1 CDK1 EFTUD2 SNTA1 MBD3 DCTPP1 ATP2A1 SLC22A3 USP13 TRAF2 NKX2-8 SLC13A2 STAT5B RIPK3 TEAD1 FAM73B WNT2B FAM187A
CAHOY_ASTROCYTIC http://www.broadinstitute.org/gsea/msigdb/cards/CAHOY_ASTROCYTIC DIO2 EGFL6 ATP13A4 MYOM3 SLC25A34 FAM20A THRSP ABCD2 TNFRSF19 FARS2 KIAA1161 BMPR1B CYP4F11 SLC7A10 HAPLN1 BTBD17 GLT25D2 SLC6A11 AIFM3 KCTD14 AKT2 SLC7A11 ABHD1 RORB SYPL2 SLC13A5 AGT COX10 PPARA PLA2G3 PANK1 SLC27A1 RSPO1 PLD2 PPP1R3D TTPA NIPAL3 NTSR2 ATP1A1 RARRES1 FRMD5 RASA2 GRIN2C NRARP IMPA2 NMB IL17RD RNF24 ELF5 ASNS ADCYAP1R1 FGD6 HSD11B1 CBS VEGFA SLC30A10 TTYH3 SEMA3E RGS20 VNN1 SCG3 LGI4 HEY2 LPGAT1 ABCB9 KCNJ16 RAN SLC1A2 STK38L CKAP5 NCEH1 AQP9 TECTB AGPAT4 GABRG1 GOT2 PTPLAD1 MFGE8 DNAI1 BCAT1 PHKG1 CYP7B1 CORO1C TMEM51 FGFR3 ELOVL2 PAK3 ADORA2B GPR85 CHRDL1 HEPH LYRM4 SPIRE1 SLC46A1 BTG1 MERTK APP PAPSS2 GPAM GRHL1
CAHOY_ASTROGLIAL http://www.broadinstitute.org/gsea/msigdb/cards/CAHOY_ASTROGLIAL C3 LCN2 CD109 SUCNR1 NUAK2 CASP12 RASSF4 DEFB1 PQLC3 ANXA1 OGN GPR126 OMD CNN1 MYOF FBLN5 INSL6 AKR1B10 LTBP2 FAM178A PKP2 HMOX1 CRYGS RHOD P2RY1 GNA14 KLHL21 FMOD C11orf88 PCDH8 LPIN3 GLIPR2 ATP8A1 WISP2 CASP1 LOX MORC4 SERPINE1 FAS TIMP1 SEMA3B PHACTR3 ITGBL1 LGALS3 CAPS2 PCDH17 KAZALD1 CCDC28B LBP UGT1A1 DYSF COL8A1 EREG GPNMB TBC1D2B FAM26E TDG SPATA6 NOX4 TAGLN PSTPIP1 CCDC96 IGFBP3 TSPO C1QTNF1 SLC24A3 VLDLR LRP2 EMP3 TNFRSF12A TMEM37 AEBP1 MRPS6 NPVF CCNG1 KIRREL3 CTTN LOXL2 TRAF1 MXRA8 CP PON3 PRSS23 COL5A1 MSN FOXJ1 COL4A6 PTRH1 C2orf40 CLCN4 PSRC1 ATOH8 ANXA4 C1orf31 GPHN C9orf167 OMG ACTA2 SERPING1 BST2
CAHOY_NEURONAL http://www.broadinstitute.org/gsea/msigdb/cards/CAHOY_NEURONAL NEUROD6 CALB1 HS3ST2 GLRA2 TBR1 GDA CAMKV DYNC1I1 RGS4 KIAA0319 NAPB GABRA5 RAMP3 RASL10A HCN1 EPB49 NELL1 CCK SST LIN7B CDH9 ICAM5 SIDT1 CELF4 SLC17A6 KIAA1045 SLC8A1 GREM2 PGM2L1 CPNE5 SLC6A7 CRH MYO5B STX1A PENK HPCA SYT13 MEF2C TRHDE NTS RPRML DRD1 KCNIP4 BCL11A CAMK2B GABRD GABRG2 CPNE4 ITPKA COL19A1 EPHA7 MYT1L KIAA1239 SCG2 SV2B NXPH2 SYT5 RASGEF1A NEFL BCL11B SATB2 SLC6A17 SYT1 CKMT1A TSPYL5 SYT4 SLC35F4 CBLN4 KRT222 RTN4RL1 MYH3 CNTNAP4 C20orf103 NSF SH2D5 ENO2 GPR22 GAD2 PNOC SLC25A22 HSD17B4 CALN1 FGF9 CRHBP PRSS12 NEFM GRP FABP3 MLIP PRDM8 MAL2 METRN NRGN PPFIA2 FAM123C CLSTN2 CELF6 CACNG3 JPH4 STXBP1
CAHOY_OLIGODENDROCUTIC http://www.broadinstitute.org/gsea/msigdb/cards/CAHOY_OLIGODENDROCUTIC GAL3ST1 PRKCQ PLXNB3 PLLP C1orf130 DKK3 BCAS1 DMRTA1 LPHN2 ERBB3 UGT8 FA2H SERINC5 COL20A1 ICK NINJ2 SRPK3 KIAA1958 RTKN AHR SOX10 SEMA5A NRP1 HIP1R FIGN ATP10B MAP3K15 GALNTL4 ZNF276 GJE1 CNTNAP2 FBXO7 LHFP PSTPIP2 SEMA3D PHLDB1 CRIP2 CDR2L BFSP2 IFFO1 GPR17 GAB3 LCORL ABHD8 C11orf9 FAM89A DUSP19 RNF122 C20orf57 FAM57A CLN8 EPN2 ODZ3 DOCK7 PPP1R21 EVI2A KCTD1 FSTL1 G2E3 USP16 SLC35B2 SOX8 SIRT2 MAP6D1 RBM11 BCR DCPS EFHD2 TSPAN2 WIPF1 FBP1 TUBA4A KIAA0415 BACE1 CCRN4L POP4 CRYM FEZF2 C17orf76 CPOX PKIG CSDC2 AGAP11 SPEG DOCK10 PUS7 PRKAG2 RNASEH2B NRM RCBTB1 P4HA2 NGRN CTGF NR2C1 LRRC48 ELOVL6 GNG8 CLYBL ZNF536 DCT
RPS14_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/RPS14_DN.V1_DN CA3 ART4 TMSB15A DOCK9 PSAT1 AGAP1 ELMO3 ASNS CBS ID1 PBK ADD2 B3GALNT1 RGS5 CNN3 PKLR ERCC6L EMP2 TGM2 CHAC1 SH3TC2 TRIM29 CRISP2 APOBEC3A CRMP1 HMGN5 DDN TSPO2 EYA3 PC DYRK3 SRD5A3 STMN2 PCOLCE LRRC20 MIPEP TUBG1 CDCA3 MAMLD1 MCM10 E2F8 TPRA1 LGR4 ESPL1 SIRT4 TLN2 TK1 MANEA MYOC CYBRD1 FOXRED2 BCAT1 MKI67 ENG IPO4 TRIP13 SPHK1 IL7 PLK1 CD320 SLC29A2 INCENP GATC MYBL2 S100A3 PCSK7 KIF15 SLC25A21 PYCR1 TUBB2A BAG2 RASIP1 ATAD2 SLC29A1 SPTB ORC1 MYH10 IL15RA BYSL GUF1 SRM DBH MYLIP GAL ARHGAP11A EXO1 SSSCA1 COLEC11 NEFH CAD ATP1B2 KIF20A DGCR11 FZD5 C14orf132 NUP155 AGFG2 LOC730101 ZNHIT2 DNAJA4 SUV39H2 KIF5A ECT2 APOOL C10orf2 CENPE TFAP2B RPUSD2 MYO19 KRT13 SHMT1 KIF2C TUBB2B FBXO5 FAM164C MRPL12 VARS PRC1 AOC2 MSH2 SRR SLC6A8 CDC6 RAP1GAP CDR2 KLHL7 ALAD EPCAM ZWILCH GLRA2 GPR125 SLC31A1 C8orf55 POLD1 KCTD20 BAG3 CCNB2 SLC43A1 MACROD1 DLGAP5 TLX2 FAM203A DEPDC1 TBRG4 PRMT3 CLCN4 KIF23 NCAPH MRPS2 LARS2 MRTO4 ERCC2 NLE1 GCDH MDM4 EPB41 REPS2 NOC3L SERHL NID2 GSTA4 MCM5 GPATCH4 USP5 STEAP3 RRS1 NMU CHST5 ZNF74 COBLL1 KANK2 EIF2B3 PES1 CDC20 LLPH DARC ISOC2 GTF2H4 TWISTNB PCK1 TMEM48 GEMIN4 GINS2 RPS28 MTPAP FICD TUBGCP4
RPS14_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/RPS14_DN.V1_UP CCL2 ADAMDEC1 SPINK4 CDKN1A CALB1 PLA2G7 BIRC3 GPNMB NCF2 SPP1 POM121L9P CELA2A EMP1 LECT2 IL8 CD14 ACTA2 SCN3A EGR3 CLEC7A BCL2A1 PMP2 TGFBI KCTD12 ENPP2 CLEC5A LY86 PTPRO CROT MX1 TFEC MX2 PADI2 LST1 ZMAT3 LINC00461 ATP8B4 ANXA3 PTPRE CR1 SMAD3 FLVCR2 LY96 RGL1 GPR137B TNFAIP2 ITGAX CAPG MPL ADAMTS6 TRIM22 FBN2 CYFIP2 ELANE CPM CTSS MDFIC DMXL2 CCRL1 CEACAM8 TRIM36 CLEC2B ADRA2A MAF PROM1 SEMA3D AZU1 PID1 RASAL2 RCBTB2 KMO SPINT1 PLAU PLK2 ST3GAL6 HLA-DMB IGSF6 MS4A6A HESX1 TAC3 DNAJC22 RMST IL1RAP TYROBP GDF15 SFXN3 HLA-DQB1 CYP1B1 RASGRP3 SEPT10 P2RY14 CSTA CCNA1 ARHGEF3 SPTLC3 GPR183 SH3GL3 VWF PTGDS IFI16 LPXN CTSG SLAMF8 RAB31 ANXA6 CACNB4 COLEC12 CDCP1 HEY1 GNAZ EPS8L2 CASP1 LY75 FUCA1 RHOB FRY SORL1 EVI2A RBM47 MARCKS ARHGAP25 GFI1 NR4A3 CD69 ANPEP PDE4D SH3BP5 HLA-DMA IL1B F5 SH2D2A AIF1 CDC42EP3 SNTG1 KBTBD11 C12orf5 VNN1 TM6SF1 ITGB2 IGFBP7 PILRA SASH3 ANKRD1 ALCAM PDGFA CCL1 C3AR1 CTSH CRTAM ADA CYSLTR1 HLA-DRB6 RIN2 JAG1 ITGAL TNFRSF9 ARL4C PF4V1 PTGER4 EVI2B NYNRIN PTPN22 SLC31A2 CD9 PTPRG SESN1 PRG3 GNB5 ATP8B1 KYNU CEACAM6 BCL6 SDC4 F13A1 HCK PRTN3 TNFRSF10C SIRPA ITGAM CECR1 GJA1 NKG7 DCN BST1 MYO1F CD300A HLA-DRB4 CRIM1 ICAM3 PYCARD MNDA STX3
IL15_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/IL15_UP.V1_DN EYA1 MOSC1 CDKN1C CD177 CACNA1E KCNC4 CACNG3 TCN1 SLPI HTR2B CNTN1 ZNF571 SEC14L2 VWF EFNA1 TGM3 CD72 FZD2 RLN2 FAM124B ATP8A1 C21orf96 GPR35 EVI2A MYLK C19orf21 TSPAN32 TMEM35 ADAMTS2 CLEC2B GOLPH3L GDNF AMELY TANC2 SLN SYT1 TNFRSF11A SERPINA5 OR2F2 BCL2L10 ABCD2 MEOX1 NPY5R SELP DNAI2 MAP2K6 MOSC2 ATP6V0A4 SEMA6D PTGDS TCEAL4 KCNQ1 GNAT2 SLC25A31 ASPHD1 MMP19 KCND1 HBP1 MYH7B C6orf27 KLHL35 FRMD1 ID2B PRSS16 C19orf57 TNS3 WDR52 DEPTOR CLDN11 ACTN2 TBC1D2 PIK3IP1 ETV2 CCDC64 TOM1 ADAM29 TAS2R9 PARP11 ZBTB44 BEST2 LOC79999 AKAP5 LRMP POU1F1 SLC17A1 TAS2R1 IL4 IL22RA1 ARHGEF10 GFI1B LIPF FUT2 IGLV2-14 TNFAIP2 HYAL4 ARL4C PGLYRP4 PLK1S1 S100A3 C6orf123 FASLG BHLHB9 KCNS1 PDCD4 GPC4 PROM1 HIST1H3J APOBEC1 FLJ13310 SIGLEC15 SESN1 CLGN CRYGB RETN TG CXorf21 PRKG1 PCDHB3 SEPT10 RNASE2 GEM GALR3 SNAI2 RPL3L GPX2 LRRC37A KIAA1462 CUX2 ENTPD5 NKX2-5 ADAM12 ERC2 RAB6B KRT2 DACT1 LOC730101 SOX15 PRDM11 RASL12 RHOBTB1 EPS8 OR7A17 ATP10B LINC00302 LRP2BP TMPRSS11D FLG CYB5R2 TMEM180 CCNG2 HOXD13 TXNIP ADRA1B OSR2 SCN3A CNTNAP3B GUCY1B2 FSTL3 LYVE1 WNT4 PRDM14 DTNB LGR4 C14orf132 SPATA1 CRHBP GLRA2 CEACAM7 KCNIP2 TAAR2 RIN2 PLCL1 DOCK3 DOK3 TSC22D3 CST2 LGALS4 SPAG4 EBF2 PNRC1 TRPM6 SNRPN SLC26A3 PWWP2A C6orf124 CCR2 PBXIP1 TGFB1I1 CHIT1 ELTD1
IL15_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/IL15_UP.V1_UP EGR1 EGR2 IL10 OSM TLR3 MAFF DUSP6 EGR3 C13orf15 FUT5 FOSL1 TNFRSF4 GADD45B IL13 CDC25A SOCS2 RGS3 VDR FLT3LG PTCH1 SLC7A5 AIM2 CISH LIF LGALSL PIM1 TMEM158 FLJ11827 CXCL12 SPP1 SLAMF1 C1orf20 CD3EAP RGS16 C19orf28 CLSTN3 TNFRSF12A CALML4 PIM2 SLC29A2 KCTD12 MAFK BMP2 LILRB4 HEG1 CDH3 CCL21 REST ZBTB32 RPP25 CAPN10 TNFSF11 TMPRSS6 MPP6 RNF144A TRMU HK2 LYL1 IRS1 PLEC TMEM209 KCNJ2 APLP1 SLCO4A1 LTC4S PRM1 LRP8 CD69 RAB40A POLR3G NEUROD4 CNNM4 LSP1 AP3M2 IL18RAP PTH1R PQLC2 ZBTB48 CYP7A1 ACVRL1 FOXP3 CENPT USP36 PUS1 YRDC DGKG RHOB DLX2 PAK6 SLC1A5 SLCO1A2 LIME1 PNMT SPAG11A PRSS2 ZBTB7A PSG4 URB2 JUNB FAM57A IL1A HOXC8 REEP2 DUSP4 LLGL2 MAF IRF2BP1 RAB11FIP1 PMM2 AHR HS3ST1 PTGER3 L1TD1 SH2D4A SPINT1 HS3ST3B1 C10orf2 RRP7B TET3 PUS7 ELMO3 ZNF276 DUSP2 TNFRSF21 C19orf73 SOCS1 KIF21B ZNF205 APOBR FOS C17orf88 KANK3 OR7E47P TIMM50 ADAM19 PER2 KRT13 PLAC4 ECM1 AMD1 HSD17B14 SHROOM2 CCL4 PTPN7 ZNF215 ZNF343 SPRY2 PYCRL SPOCK1 CPA4 DHRS3 AK4P3 IL5 UTP3 KIAA1539 PAX1 FAM3C C9 OR7C1 NR2F2 NOP2 CCNE1 SLAMF7 NUDT13 CCDC85B SMEK2 CALML5 TNFAIP8 NOX4 HRH3 KIF1C TPST2 ZBBX GPT ZNF614 INHBB PLXNA3 PDE4A ETV4 ANKRD36BP2 KCNJ9 TRIB1 MED26 TNFRSF9 CCDC132 PNO1 LOC390998 KHDRBS3 S100A1 LOC388796 HABP2 FZD5
IL2_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/IL2_UP.V1_DN CDKN1C HTR2B DDX58 SYT1 C19orf21 SNPH EYA1 MAB21L2 RHOBTB1 CLDN16 TNS3 CD160 CACNG3 A4GNT HBP1 MOSC1 RIN2 SLC17A5 EVI2A ZNF446 CLCA1 FAM110B TANC2 THAP10 ZNF695 PRSS16 NXF2 EHHADH AMELY KIAA1462 CHRNB4 SULT1B1 IL25 INHA PAK3 APOBEC1 RASGRP3 CNTD2 CLEC2B CXCR2 HHIPL2 SLN AGBL2 RNASE2 GOLPH3L HIST1H3C EFNA4 PDE6B ABCD2 CEL CD34 SPATA1 PBX1 RASL12 SEMA6D COLQ ARHGAP6 PNRC1 SARNP HSF2BP MEOX1 LRP2BP PLCH1 WDR52 GDF5 MYCT1 TCEAL4 ODAM ZNF362 LINC00302 HIST1H2AG PLCD1 HOXA5 PDE1C VILL HSAJ2425 ZNF230 PLCL1 TEK TSPAN7 SCN3A PBXIP1 TTC23 SEC14L2 CXorf21 PDCD4 AIM1L CNR2 TG CCNG2 TGM3 FAM124B ASPHD1 SESN1 MOSC2 DEPTOR GPRC5D FZD2 ZSCAN16 RORB CCDC64 RPL3L LRRC37A AIRE NR1I2 PROM1 ALG12 ZNF571 KIAA0319L CHGB HKDC1 HDAC5 NAP1L2 MYLK WSCD2 ISL1 H2AFJ KCNS1 GALR3 CD72 CAMK1G TAGLN3 PLEK UNC93B1 CACNA1E NKX3-2 TNNT3 FUT9 KLHDC8A ACPP TMEM19 LIPF SLC24A1 TXNIP F13B ADAM2 ZNF391 C2orf67 PRKG1 IL18 NUAK1 RABEP2 FCGR2A CUX2 GUCY1A2 ZNF408 ARL4C KDM5D SNAI2 SCHIP1 TMEM140 CST1 ACF RGS2 MAP2K6 C15orf60 TNFAIP2 PPP2R5C NDOR1 ARNT2 GPX2 ZNF629 SSTR5 PIK3R3 POU2AF1 C6orf124 CCDC81 FZD3 SCGB2A2 TRIB2 TRPM1 PCSK5 P2RY4 MAGI2 ATP2C2 H2AFY2 SDCCAG8 FLT3 NACAD METTL7A PLA2G4C C6orf123 CBLN1 LOC283761 CYP46A1 MOGAT2 ERC2 BTN3A3 IGJ MMP7 SLA HNRNPA3P1 DLEC1 BTN3A1 UTY LINC00472
IL2_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/IL2_UP.V1_UP EGR2 EGR1 IL10 OSM MAFF C13orf15 TLR3 DUSP6 EGR3 FOS TNFRSF4 IL13 GADD45B FOSL1 VDR SOCS2 RGS3 CDC25A C19orf28 CISH SLAMF1 RGS16 PIM1 SLC7A5 LIF TNFRSF12A AIM2 CALML4 CXCL12 LILRB4 PTCH1 TNFSF11 CAPN10 ZNF343 SPP1 ZBTB32 PIM2 CD3EAP BMP2 TMPRSS6 EVPL DGKG MPP6 KIF21B KCNA3 HEG1 LGALSL RRP7B HK2 KIF13A TMEM158 GPT CD69 URB2 KCNE1L FLT3LG SIGLEC9 OR6A2 LRP8 IL18RAP TPBG GALNT8 PRAF2 PRR7 RNF144A FLJ11827 RPP25 GNRH2 KIR2DL5A ESRP2 PQLC2 VSNL1 ELMO3 PLXNA3 PUS1 RHOB CCDC85B KIF1C PPAP2C FLT1 AATK F2RL2 IL1A INHBB FAM57A IFNW1 TTTY1 LOC388796 SLC1A5 DUSP2 RSPH6A SLCO4A1 CDCP1 PIP TRIB1 EVX1 CDH3 ITGA9 POLR3G SLC29A2 ASPA SPHK1 LRRC6 MEGF6 DHRS3 PTPN7 CNKSR2 YRDC USH2A C10orf2 TNFRSF21 IRS1 TNFSF14 ADAM19 C11orf80 TBC1D9 MAGIX AP3M2 RHBDF2 SH2D4A HTR4 RAB11FIP1 PPP4R4 BTC AMIGO2 CCR4 KCTD12 DUSP4 KCNK5 PAK6 SLC34A1 SOCS1 KCNG1 NCS1 HABP4 LOC96610 ZNF215 IQCG AHR TNFRSF9 STX11 JUNB RPA4 ASCL3 RNF20 FZD5 PYCRL PRKCD ANXA2P1 GABRB3 TM4SF1 PMM2 OR10J1 TEX13A PLEC CXCL3 GABARAPL3 TRMU CLDN5 REST LMO3 AK4P3 ABTB2 GFAP EHD2 PUS7 PTH1R SPATA2L FOSL2 HOXA11 KLF6 NR2F2 SLC2A3 OR7E47P PRSS50 TNFRSF1B SPRY2 USP36 FOXP3 KLRK1 CD52 RAC3 TM4SF5 WISP3 C12orf44 TAS2R16 PDE4A IL5 INSR TNFAIP8 ALDH4A1 WDR62
IL21_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/IL21_UP.V1_DN ID2B A4GNT CHGB LCN2 KRT85 ACHE CUX2 PRSS16 DGKQ CEP41 MPDZ POU1F1 TNNI3 TAS2R9 PDE6B C6orf27 CORO2A LPPR4 KDR KCNC4 DNAH7 SLC16A2 CEL CHFR C6orf103 TREM1 OR1F1 PLEK CD177 KCNS1 HBD HIST1H2AK PLCB4 ZNF358 SLC22A7 TLR5 F11 PNMA3 RIN2 FGF6 LATS1 NACAD CRYGB IL19 PCP4 LRP5L DMRT1 PHKG1 TIMP3 CNTNAP3B HYAL3 KIAA1462 SEC14L2 BCL2L10 C6orf105 ZNF167 MIR600HG BEST2 GPX2 CD72 GUCY1B2 ZNF550 PACRG TNP1 IFNG PDE1C SLC17A4 FAM124B PRB3 ZNF446 PDHA2 CCL16 LRCH1 SCN7A PDE3A WNT4 PCDHB3 OSGIN1 MAB21L1 ZNF324B GSR GCNT4 GPR20 PARM1 PRKG2 SLC25A31 ACVR2A HOXB8 LRP2BP SOX3 LDOC1 F13B ELTD1 FGB NRXN1 MTNR1A FES CIDEA ECHDC3 ASPHD1 OR1A1 IGLV2-14 PRKG1 ZNF286A USP27X TAAR2 HKDC1 USP18 DOC2A GDNF CMKLR1 CCL24 OR2F2 GPC3 NAT8B FGF16 THEG LPA TINAGL1 C19orf21 DIRAS2 MEOX2 LRP3 SCAND2 BTBD3 ITGA6 TG NTF3 CCK CCDC64 TAS2R1 KRT32 NPY5R C1QTNF9B-AS1 SPTBN4 LMOD1 DGCR9 ADRA1B PTGDS CLDN10 HTR3B PCDH9 SLC17A5 MTL5 TFAP2B AIRE ITGA2 EPS8 FRMD4A C1orf222 PPP1R3A EFNA5 IL12A ZNF155 SP4 RALGPS2 ADAM7 PROX1 RHOD CYP3A5 NUDT7 CACNA2D3 AP3B2 NEFL MYLK GJB3 GPC4 HAL KLHDC8A ACF GUCA1B TSPAN7 CD40LG POU5F1P4 NDP USP9Y LAD1 PRR5L LINC00302 SLC17A1 CNTN2 CLEC7A ZNF629 RAMP3 SLC24A6 CYP46A1 ADAM28
IL21_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/IL21_UP.V1_UP VDR LYL1 AATK LOC654096 MYOZ1 CLSTN3 IQCG FOSB CDH3 PAX1 C1orf20 LILRB4 CPA4 PTH1R TLR6 C19orf28 GRIA4 FA2H NUDT11 MVD ZNF345 NDRG4 AIM2 SPG20 CNNM4 SLC29A2 PTX3 PTPRN SPRY4 CCKAR CTSG LAMP3 EGR2 PRSS2 EHF TEX13A PPAP2C CAPN10 ABCC8 PIM1 DGKG ZIC4 MFSD7 KRT6B LOC646621 PAQR6 ARHGAP32 KCNC3 PAIP2B LOC96610 LAG3 IL18RAP SCN9A GPR176 NOS2 PCDHB13 ST6GALNAC2 AGMAT CASC1 C13orf15 SEMA7A MARCH2 ZNF749 PCDHB1 CD79B KIR2DL5A MAFK ZNF76 SLC7A5 AGAP2 FOXD2 PRSS50 GPR85 LIM2 CFD PCSK7 SLC12A8 BET1L OR6A2 S100A1 SPP1 PIM2 BAIAP3 SLCO5A1 TPST2 MMP25 SPARCL1 GUCY1B3 EIF3FP2 TSHR SERPINC1 TPBG MYH15 SCN8A BOK HTR4 ARG1 SCNN1A HOXB2 LOC644963 KIF21B CYP27A1 ECM1 XPNPEP2 CHI3L1 IBSP CBL HABP4 TEAD3 RSAD2 FAT2 DNASE1L2 DIRAS3 ROR2 SLC28A2 ZC3H12A UGT8 BMP10 CDH5 MYH4 LEPREL2 MC3R NR1H3 ABCB11 SST VSNL1 DPYSL4 NKG7 MYOZ3 GNAL TLR3 LEFTY1 GRIN2A MGC4294 CXCL12 PLA2G7 RDH5 POU4F2 ALDH4A1 ITIH4 USP2 PUS7L FUZ TF KLK11 BCL6 MUC1 COL15A1 OPRL1 MPZ P2RY14 PYGM GIPR HEG1 SLCO1A2 TAS2R16 TRMU ABCA6 CT62 ANKRD7 ANXA2P1 DLX6 ELOVL4 OLFM1 GABRB3 LOC440334 DYRK1B KRT24 EVX1 CD6 SMPX C1orf159 FAM107A GDF9 ST8SIA3 CLDN7 TBC1D19 NMBR METTL19 AMN RPP25 ARHGAP22 C6 HIST1H1E PCDHA5 PTPRO OXNAD1 NKX2-8 CLDN6 TP53AIP1 SPINT1 LIF PRR4
PDGF_ERK_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PDGF_ERK_DN.V1_DN NFKBIA DUSP6 SPRY2 MYC DUSP1 MYCN MAB21L1 TRIB1 TBCC TMEM115 KLF10 POLG2 BCL10 FBXL14 CDR2L MAD2L1BP PPP1R10 PER1 PNRC1 EFNA3 FADD GTF2B DNAJB9 FZD2 NEFH MAFF KDM2A RHOB E2F6 MPPED1 RNF139 BTG1 JUNB PPP6R1 ANGEL1 DUSP8 PDGFRA SMAD7 IRAK1BP1 SAC3D1 FAM89B MGAT1 SLC3A2 MOGS SLC25A44 IRF2 MFSD5 ZNF193 LTBP1 PRSS16 DYRK2 SCO2 ITGB6 SMA4 LY86 CEBPB TNFSF8 DHX34 CDKN1B ERF FRAT2 MAP3K3 ANKRD40 MNT MON1B TRAIP ZNF500 PNMT HIC2 PPP2R5B KIAA0922 TBX2 OMD IL2RG PPM1A TRY6 ATXN8OS LRRC6 DNAJB1 MAFG C10orf137 CCNF PRCC TBKBP1 USP33 NFIL3 KLHL25 APC2 ADM IL7R ZBTB5 FAM102A MBD3 EGR1 ARHGEF16 BRPF1 CNTRL C2CD2L SULT1A1 MORC3 JUN IDUA NOP16 LOC157627 CKS2 GIPC1 PKD1P1 DTX2 TFIP11 NCAPH2 PISD UNC50 MAPK3 BCL7B BNC1 BCL9 HINFP CCNG2 EFNB2 TGIF1 HAUS3 TMED5 DIP2A PITPNM1 FAM50B PHOX2B TMEM11 ZNF324 CDK2AP2 KRT13 ISL1 BAG5 THAP11 BPGM CIC ASMT GRIN2B RTN2 PPRC1 ZFP36L2 FBXL18 LRRC40 SMOX SUOX ZNF202 SNAPC4 PDE4A PHLPP1 ARF6
PDGF_ERK_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PDGF_ERK_DN.V1_UP MPI DSCR6 C22orf31 TAT NDN CDK6 EXOSC10 CLEC2B GLRA2 LOC81691 LAS1L SLC39A7 PTGDS FAM149B1 ALDH5A1 CREG1 NEK9 TAF12 SNRPD3 C7orf54 ZNF185 PDIA3 NEU3 ST6GAL1 ORC3 SNX19 PPIC LRPAP1 SNRNP40 ATXN2 MTHFR TRAF5 CETN2 SPAG5 FTSJD2 TNNT2 TSPAN5 LUZP2 FSTL4 CALML4 MAP2 KBTBD11 SERINC1 MRPS11 CORO2B C4orf6 GNMT KIR3DL2 HEBP2 ACOT11 ELP4 CFDP1 ATXN7 OCA2 C1orf20 AAGAB PAN2 NMBR EXOSC7 AZI1 C17orf75 MAOA ANXA10 TAB1 MAGEA8 PMP22 RBM3 EXOSC8 RALYL HDLBP PPIP5K2 AQP3 XPA ATF6 INHBA FCHSD2 PAX2 NCKAP1L NBAS COL10A1 TCEAL2 ABCC6P2 GLRX KLK7 OXCT1 RRBP1 SOX21 REST NRG1 MYBPC3 CLCN2 TTC18 NRIP1 DDN ANXA11 GAP43 ZIC4 CDC14B NTNG1 NOS2 KIFAP3 TAF1B IFNA13 RTCD1 THOC2 FLI1 PSMB10 MAML3 MVK ANXA7 CCP110 RARS PHLDA2 TSPAN9 MYO1E GALNT3 LMAN1 GTF2H5 RPS20P14 VPS39 ZNF84 SERPINB2 IL12RB1 PKN2 NUP160 RPIA LRCH4 TBX5 CHEK2 CCL25 ACP5 HCRTR1 DNAJC7 STX12 TP53I3 SRY SWAP70 COL1A1 MID1 HSPA4L PPP1R37 OPRK1 LEPROT ADCY7 NDUFS1 HYAL1 CPS1
PDGF_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/PDGF_UP.V1_DN LY86 SMR3A PRSS16 COL4A5 SLC28A1 TNFSF8 DSC1 MXRA5 UNG C6orf123 EVI2A CHST15 PRSS1 FBN2 C9orf38 DKFZP564C196 HYAL3 LILRB5 CTNND2 BCL3 SLC8A2 CYP1A1 SAG PF4 PARK2 ITGB6 LTBP1 TPSD1 FCGR2A IL7R LOC650610 MAPK3 TENC1 DBP OMD LOC157627 C2 KRT13 TRY6 CCBL2 CUBN OR10H2 SLC9A2 LIMK1 CCKAR MSX1 GNL3L ACADL COL1A2 GK SP140 IGHM KIR3DL1 HCG4B ZNF688 ZBTB7A PLAT BPGM KLF1 HIST1H1T GPR39 AOX1 ADAM23 ARSF PLAG1 ATXN8OS SPTA1 CRABP1 ZNF10 SLC13A2 PPP2R5B SLC10A2 HOXD1 ANXA2P2 ALB IL17A LRRTM2 SPAG11B RHOBTB1 TIMP3 SLC26A4 HLA-DPA1 ARSE CDC14A BHLHE40 LOC643093 IGHV1-69 VENTX BMP3 RAD9A DNMBP CRYGA LRP2 LOC647070 SEMA3C CCL13 SCAND2 MC1R TRAIP HIST1H2AE CRYAB VPRBP TACSTD2 TUBA4B EGF CYP3A4 MGC40069 ADCY2 KL KRT20 HERC3 ADRB3 CCNT1 DUSP10 SLC22A18 USP33 LY75 PAFAH2 EDN3 ACVRL1 TBX2 JUN MAP7 CYB5R1 INE1 TP53TG5 GIF FPR3 FLJ10038 KIAA1217 KLF5 TCL1A GNLY KIR2DS1 SLC26A2 NAG18 ATP4B PCDH8 ASPH CBLN1 ZNF33B CLCN7
PDGF_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/PDGF_UP.V1_UP FOS ARC TFPI2 DUSP5 EGR1 NAB2 SNRNP35 RNF19B CDKN1A CCNE1 MBTPS1 TMEM158 LRPAP1 GNG11 PFKFB3 ORC2 SIK1 FOSL1 DNAJA2 WDR46 HSPA2 CDK5R2 ELOVL2 DEGS1 CDK6 ETFB NUP160 CITED1 SLC7A5 GLOD4 SNRNP40 KLF10 ZNF460 RAB35 ZBTB24 ZNF238 DDIT4 SNRPD3 MMP17 ATXN2 PSMC3 KBTBD11 SDC3 FDX1 ATAD2B FKBP2 NDN NRAS TRAF5 C7orf54 ATF3 NEU3 CBX4 DKFZP434A062 SLC39A7 PARG HDAC4 TET3 SLC20A1 CCDC94 FAM149B1 TRIP12 P2RX1 MADD STK10 MAPK6 PPP1R37 HTR1E ZNF304 NCKAP1L SLC5A3 UAP1 CLDND1 IFNAR1 LAS1L CHKA CDC25A MORC2 NEDD9 ATF6 EGR3 ZNF394 SLCO3A1 GADD45A ANXA7 ADAM9 RAB40B EZR FAM98A POTEKP PANX1 GNL1 DIXDC1 VPS39 KDM6A TFIP11 TJP2 SUZ12P GPSM2 BICD2 NDUFS1 JOSD1 THOC2 FAM3C MYL2 PEX11A RNF4 NBAS RANBP6 ATP6V0A2 CDC6 HDLBP SEPT10 URB2 SERINC1 CAPZA2 ARHGEF15 ACOT11 SERPINI1 NDRG4 TGIF2 PAF1 PSMC6 ETS2 EXOSC10 RNF14 ELP4 MRPS11 MOB1A INHBA ARR3 CCL25 PPP1R12B NDUFAF1 CBX2 OR2B6 UTP3 KCNK3 LSM1 AGFG1 SLC30A1 TAF12 AREG ATXN7 NMBR MPI
TGFB_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/TGFB_UP.V1_DN CXCR7 SERTAD2 PLXNA2 COL4A1 IFIT2 SMAD7 CDKN1B CITED2 ENTPD7 RGS2 SSX3 FGF6 MPPED2 NR2F2 SLC30A1 CXCL2 FSTL3 CXCL1 KIF18A HS3ST1 ZNF184 FHL3 ZNF395 ARID5B ADAMTS1 FANCF SDPR LGR4 MYBL1 WNT8B OSR2 BET1L RDH16 NUDT6 HAPLN1 AVPI1 OTUB2 TEK BAG4 ADRB2 MIR22HG SNAPC4 CHRNG SLC5A3 VAV3 ANGPTL4 CXADR AP1AR BIRC3 IL36G CYP2E1 EVI2A TRPM4 TLR5 EIF2AK3 CA6 ID2 HSF2 IRX5 GNE PTCH1 ZFP64 PPP1R3D MUSK CAV3 FRAT2 FNDC3B NUFIP1 SYBU SCGB1D2 GIT2 YSK4 RASGRF1 GPR39 ZNF292 BDKRB2 RBM47 BCL6 TUFT1 ISL1 MN1 TFAP2A ZNF512B FOXO4 DUSP6 RASL10A KIAA0922 MAPKBP1 IRF1 RPP25 PLEKHF1 TP53BP1 DUSP4 RGL1 PIK3R3 C8orf44 STK38L ANKMY2 EYA4 FBXL14 CHRND SAV1 ZMYND8 MLYCD ATRNL1 RNF43 ZPBP CHST7 C7orf68 PSG2 LOC388397 SAP30 DDX58 PLA2G12A TMCC2 HSPG2 C1orf105 PAQR5 MRPS6 SPRY2 THBD GNAI1 GCH1 TBX19 ID1 RAB11FIP2 ZNF696 EHF NRSN2 CLEC2B SH3TC2 OR7A17 HSD3B2 NUDT18 GPRC5C C14orf93 C18orf25 EMR3 TM7SF3 NPEPPS UGT8 KIAA1467 EHHADH IFT74 HIST1H2AM POLL PTGER4 FRMD4B PGBD5 FRS3 SLC35A1 SMA4 IFIT3 PTX3 PEX12 GOLPH3L IFIT1 RAB33A UPK2 ZNF652 CCDC51 GATA3 SPRY1 PRR15L NPAS1 TRO MINPP1 MRM1 PRX SEPT4 CCDC130 KITLG FCN3 IRF5 RAI2 PEX11B SKP2 RIMS2 TF PCBP3 FAM13A IGFBP1 ZNF74 C19orf57 FBXL15 ANKMY1 MITF RAB38 TBC1D22B SMPD2 ZXDC PHF15
TGFB_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/TGFB_UP.V1_UP LARP6 HCAR3 ANK1 BHMT ITGB6 PAIP2B SKIL RNASE4 THPO HLX TUBB4A SGK1 IRS1 TFEB FGB HYAL1 CCDC82 FAT4 RRAD PDGFA LEMD3 PKIA BHLHE40 SMOX YIPF5 GADD45B LMCD1 PPP2R2B FZR1 ABTB2 MAP3K4 HRH1 SNAI1 CDK17 BMPR2 SPHK1 IL1RL1 CYP26B1 CASP5 FLT4 JUNB TBX3 ETS2 CST6 LIF PHLDB1 IL11 CDKN2AIP TAGLN CCDC93 EPHA4 CYTH1 KCNN4 MAS1 SLCO2A1 MAFB SPSB1 MLXIP TNFAIP8 BRDT TRIB1 KLF10 CD1E PFKFB3 PVRIG ZCCHC14 LTBP2 KHDC1 CHST11 CKMT2 ACSBG1 SMURF1 CD3EAP NTF3 KLF7 SLC26A2 KIR2DS2 PPP1R13L CLCF1 TBC1D2B MMD FNBP1L DACT1 ELK3 TBPL1 C9orf91 BCOR KANK1 HS3ST2 DDC MYBPC2 F2RL1 AKAP12 WNT4 SSBP3 ARHGAP12 C19orf21 PDLIM4 S100A3 STC1 EDN1 PRG2 CD163 HTR1D JMJD1C DLC1 DYRK2 RAPGEF2 ATF3 KLF4 TULP4 SMURF2 SMTN C13orf15 SLC7A6 NDST1 LYPD1 JUN ADAM22 TLE3 SOCS6 RUSC2 WNT3 UBL3 NGF CTGF JMJD6 T MKL1 SEC14L2 CAPRIN2 SCHIP1 C6orf145 HAB1 NFATC4 ZNF654 ITGA5 PHF16 RHOB SKAP1 KDM6B DGCR11 RCOR1 SMAD6 PPARD WNT7A RGS12 MTRF1 SHCBP1L PMEPA1 DPY19L1 PMP22 RNF19B PDGFB CSF1R IGLV2-14 NCOR2 LIPG IL19 ELL2 DIEXF CDKN2B ZFP36L1 ABCG1 ANKLE2 FERMT2 PLEKHA1 CYP24A1 CHST3 JAM2 FOXF2 OVOL2 CYP2J2 FAM91A2 FGF1 TNS4 MPZL2 COL16A1 WNT16 ID3 RGS11 LRP12 MATN1 WNT11 SLC17A3 CRYAB MED18 FOXD1 TMC7 RNF126P1 PIK3CD CSNK1E
YAP1_DN http://www.broadinstitute.org/gsea/msigdb/cards/YAP1_DN ACOX2 ITGA2 LCA5L WSCD2 RHBDL1 ORC2 TSPY26P PIGO KATNB1 RFX1 PRCC LOC285281 THNSL1 LIMD1 LOC283547 GOLGA2P5 TEX101 ZBTB39 ZNF645 IL4R IQCF1 WBSCR16 MYLIP CCDC87 PDIK1L TIMP3 LONRF2 SLC6A5 XAGE2B LOC284023 UGT2B4 FAM122C VSNL1 FICD DOCK11 TAS2R7 GPR50 APOBEC2 CHCHD3 ITGBL1 SLC17A7 LOC642775 SLC9A1 HEY1 GUCY2C CACNB4 MYO1B C6orf58
YAP1_UP http://www.broadinstitute.org/gsea/msigdb/cards/YAP1_UP SEMA3C CNP FAF2 KIAA1033 SIAE MAML2 C8orf48 DDB2 ARHGEF10 FLJ27352 MYLK TEAD1 RHOQ FLOT1 C8orf58 SNAP23 DLX5 RPN2 C9orf95 PRKACG C13orf15 GLTSCR1 FAM167A ZNHIT6 NRAS KCNK12 SHISA4 MSN CYP4B1 CCDC8 CAMK4 MOCS2 CDIPT CDK14 FAM45A LLGL1 GTPBP3 DRAM2 RFTN1 YWHAZ SAMSN1 RAB40C COX8A PTPMT1 CXorf56 FAM35A SNX7
SIRNA_EIF4GI_DN http://www.broadinstitute.org/gsea/msigdb/cards/SIRNA_EIF4GI_DN HSD11B1 PPME1 SP140L NEDD4 AKAP10 ATP6V0E1 MAPKAPK5 C20orf20 MYO19 PDCD10 CSAG2 SLC43A3 C2CD2 PSME3 CDR2 FCHSD2 RNF34 SRPK1 SPTSSA SRSF8 MFAP5 MBD5 CDH11 APITD1 ATMIN NEK7 PBX3 CFTR MAP4K3 EIF5A2 S1PR1 CCL2 VPS54 IMPA1 LOXL2 SLC17A7 MAGEC2 CDKN2C MRPL9 GJA10 STAG1 BET1 FUT6 ITGAE SNX10 PDHX MYD88 C4orf43 CDC6 RIMS2 TXNDC9 WDYHV1 SCML2 COPS7A RARB ANKRD49 C3orf14 KIAA1279 PSMC3IP SSR3 TRIP13 HIST1H3A OPN1SW TANK TRPC5 PAPSS2 ADIPOR2 HLA-DPA1 SMURF2 SHCBP1 HSD17B12 ATP2B4 FSTL1 RAB7A HDHD1 FAM48A ENOX2 ACYP1 FAM206A CYTL1 PDE6D TMEM156 YSK4 IGF2BP2 UAP1 DUSP4 RIPK2 PMP22 TMEM39A STAMBP SLC31A1 DCTN6 C1QTNF1 TAF11 NUS1P3 RAB1A GH2 FAM111A MAN2A2
SIRNA_EIF4GI_UP http://www.broadinstitute.org/gsea/msigdb/cards/SIRNA_EIF4GI_UP MTO1 XPC INPP5D FCAR ZFP36L2 SLCO1A2 HTRA2 S100A14 SETDB1 C7orf10 SLC25A5 WISP2 DDX54 LETMD1 HADHB CCT4 CTSH ST13 MPV17 ALDH7A1 TRAF3IP2 PDHA1 NDUFS8 CEBPD NONO NCAPD2 ASAH1 ADSL QARS TXNIP THADA SPRR1B CA2 ESYT1 EID1 PERP HSPD1 PSME1 TCTN1 SAA1 CTSC GIN1 FRAT2 SPG20 SPRR1A LAP3 ZBED1 ASS1 ATF3 FBXO46 MRPS30 EIF3K CSDE1 KIF2A UQCRC2 ATP5A1 DDX50 DTX4 CPNE1 HLA-B ATP1A1 CSE1L MATR3 PAPSS1 LRPAP1 GSS SAMM50 ECI1 NQO1 CORO1B DRG1 FXYD3 PMPCB TNNT1 C12orf11 UBE2E1 IGF2R TCF25 RMND1 MAGEF1 PSAP BTG2 PTPN13 FAM158A D4S234E PYGL HSPB1 GLUD1 MIA3 SUN2 GPR15 DAG1 SLC25A3 AFG3L2 CAMLG
HOXA9_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/HOXA9_DN.V1_DN HIST1H3B NUTF2 AIDA RGS1 MSMO1 ADM RGS16 SPP1 DUSP7 SLC29A2 FCGR2B ALOX12 E2F8 PDK1 CSRP3 CST7 SLC2A3 GNA13 CYP51A1 BCAT1 DCTN4 HMGCS1 ZNF395 MEIS1 SSR3 EIF2C2 EGR1 ZIC1 TBC1D30 ALDOC RB1 UBE2E3 IGFBP2 C9orf38 SMAGP CDC6 METTL21B NPTX2 TBXA2R NFATC3 GPM6B DHCR7 TES FCGR2A SLC2A5 ATF5 MYO1B MPI TBL1XR1 TEX264 CPNE3 GINS4 SP1 C1orf112 ECH1 WBP2 HELLS GABRA4 FLJ10246 MACROD1 CDT1 ORC1 SAR1A NPY ALDH1A3 RFWD3 TOMM34 SLC38A1 PLK4 RNF144A CDC45 MVD C14orf118 RAB33A GINS3 TRMT2B FANCG CRIP1 PRIM2 ALDH5A1 MFAP4 EPS8 NPR3 EXOC1 ALKBH1 HOXA5 FADS1 SPON2 SCAMP4 TMCO6 CEP55 ACPP DLX5 APOBEC3B PER2 ERO1L SERINC5 GRB10 COCH SOX18 HHEX SLC25A1 ELOVL6 TMEM106C COL9A3 NME4 FCGR2C MICB RHOBTB3 SHMT1 CIDEB NCAPD2 MEX3D PSIP1 SLC7A2 ARRB1 TIPIN PTPLA HMGN5 MCM10 BHLHE40 SV2A SLC29A1 SREBF1 FZD6 C7orf68 BFAR BRCA2 STAM MT1G CBS GADD45GIP1 ITGB5 TH1L MEN1 XK FADS2 FANCL PFAS HOXA9 ATAD2 LOC51336 HSPA6 MCM3AP-AS1 H1FX NRGN LMAN1 INTS9 C14orf1 PARVB EXOSC5 METTL16 KCTD20 LSS SQLE TSC22D3 ARHGAP11A GINS1 PLAGL1 HMGCR NET1 SLC1A5 RBM38 FKBP5 GK3P FANCI LPCAT3 GMCL1 RNASEH2A NOTCH2 TEX15 KCTD15 SLITRK5 STAG3L1 PHLPP1 SPRY2 CXorf57 SAV1 VEGFB TMEM45A C1orf106 TAF4B ITGA4 CD300A TRIB3 LRRC37A4 CD3EAP PTER CCNK SNAPC3 TMEM48 HIST1H1E RDBP KLHL7 EPB41L2
HOXA9_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/HOXA9_DN.V1_UP C12orf5 TWF1 HIST1H2BK FCER2 FGL2 TRIM22 RBM47 MNDA OSTM1 CECR1 TFEC ZMAT3 S100A8 CYFIP2 CCR2 SORL1 MARCH2 SAMHD1 GPR18 SLC22A4 HLA-DMA DICER1 THBD S100A9 TDRD7 ANKRD46 MYOF HIST1H2AC ST3GAL6 RCBTB2 FRY MPO GPR137B KIAA1598 MS4A3 DYNLT3 SESN1 N4BP2L2 CYP1B1 IFI16 GALNT7 H2BFS PECAM1 IL8 IFT57 RNF11 FAS PIK3R3 FBXL5 IER5 CTSL1 VCAN HIST1H2BD SGK3 BST1 CD86 CCNA1 CD84 LY96 SLC35D2 HIST1H2BH C1orf38 PTPRE GADD45A KLF4 HLA-DRA THBS4 STK39 ARHGEF3 TGM5 IPCEF1 ENTPD4 IFI30 ISG15 SCHIP1 SNX10 JAK2 FNDC3B SLC26A2 IFT74 SLC46A3 SCPEP1 VASH1 DHX29 TICAM1 FNDC3A ZCCHC2 PTGER4 RABAC1 ACTA2 NDFIP1 TP53TG1 CHPF2 ACYP2 CA6 CCDC109B TYMP SAR1B ZFYVE16 FZD2 FRAT1 HPSE BZRAP1 LPAR6 TOB1 MS4A6A ICAM3 TYROBP KIAA0232 XPC NAGK FYN IL10RA ZNF271 SLC22A18 ADAM9 TAX1BP3 CLK4 GALC RPS6KC1 MS4A4A CYLD FAM98A CD209 COQ10B ANKRA2 ATXN1 UBE2W ZNF107 ARHGAP26 CRY1 PHTF2 NUPL1 ASCC3 PLAA TNFRSF10B GNS MAP4K4 PARP12 NOD2 FOS ROGDI UHRF1BP1L C14orf109 GLIPR1 USP15 IL13RA1 CSPG4 CXCR2 SERPINB8 FDXR FCGRT RNF130 GPR183 COL6A3 ZNF277 TPK1 KIAA1279 FCER1G NGRN OAT BAX NCF2 GAS7 CDK8 SEPX1 CSNK1G3 GDF15 ARL4C TSEN34 ERLIN2 HDAC4 ZNF394 CARD9 CYTIP PLK2 CHUK UGGT2 CHI3L1 PAQR3 SLC30A1 SRD5A1 SLC39A6 STX12 CRISPLD2 FAM105A SUV420H1 FUCA1 IFFO1 TRPM4 AKIRIN1 AGTPBP1 TP53I3 RCBTB1
SINGH_KRAS_DEPENDENCY_SIGNATURE_ http://www.broadinstitute.org/gsea/msigdb/cards/SINGH_KRAS_DEPENDENCY_SIGNATURE_ TGFA TMEM45B ADAM8 FAM83A C6orf141 LAMA3 FGFBP1 SH2D3A LAMC2 SDR16C5 DAPP1 C1orf116 LAD1 CLDN7 AREG AMPD3 MST1R MAOA PRSS22 SEMA4B
STK33_DN http://www.broadinstitute.org/gsea/msigdb/cards/STK33_DN GJB6 CYP4F3 SHISA2 BTLA PLCH1 JPH1 BMX ALOX5 GJB2 SERPINB10 BACE2 SPIN4 LOC644480 ASL CHML UCA1 CARS2 ART3 VKORC1L1 LOC283663 C2orf68 TMEM55A NUDT11 RXFP1 LOC285758 ZEB1-AS1 BEND5 MOSC2 TMEM45A C1orf115 GPAT2 MOSC1 GPM6A TEX15 SLC43A1 SLCO4C1 OBSL1 C4orf32 ABHD14B TPD52L1 STAR BCL2 TNFSF10 CHPT1 OGDHL PAWR NLRC3 PROK2 FLT3 LOC645919 SERPINB2 FAM117B SYDE2 C7orf41 C10orf95 ACAP1 ASNS WDR18 ADCY3 KDELC1 AIM1 ANPEP DHRS11 AFF3 MATN2 CEACAM6 GALNT12 WDR36 RASGRP1 KIT NFE2 ANKLE1 GPRASP2 CDA OXCT2 ACOX2 PRAM1 SATB2 APBB2 CYFIP2 VAT1L LYRM7 RRP15 CACNA2D3 HK3 POLD2 IL17D BPI BEND6 PADI2 ID3 FAM173A FLJ44635 LOC642775 ACY1 PSMG4 LOC644295 PSPH BPNT1 RANGRF KIAA1274 ELOVL6 RGS16 MAPK14 PDGFRL ABLIM1 HPDL SLC35F1 PLS1 LOC285957 FDXR LRRK2 PCYOX1 STX11 CCDC26 ORM1 FAM203A BEX2 CDC42EP3 CA8 ZDHHC23 C6orf147 MAP4K1 LOC649094 SLC25A32 C7orf23 KAZN DDAH1 PCBD1 KCNN2 SIDT2 PRKAR2B MGAT4A VARS SLC37A4 MTR MFSD3 CAST PPAPDC2 GPT2 PNMA2 HES6 HSD17B8 PIK3CB FAM84B GPM6B MTG1 TMEM143 PIGW FERMT1 VCL C22orf29 ARHGEF26 SLC8A1 MANSC1 ALCAM DEFA6 ZNF280C GZMA APEH FANCE FAM54A PM20D2 VPS13C FAM65B ANXA3 PCCB MS4A3 SCD TNKS SLC9B2 NXT2 ERVH48-1 BDH2 LPCAT2 SPNS3 TRHDE CLTCL1 DPH2 TXNRD3 STC2 SETMAR GAS2 PLXND1 ST6GALNAC3 C6orf192 MREG SETD7 TRIM58 TANC2 KIAA1804 RSAD1 ACP6 LCK MICAL2 CDK8 BTN3A3 FAHD2A VMA21 KLF5 FBN2 DKFZP564C152 MBLAC2 TNFAIP8 CXorf56 ZNRF3 ENHO C20orf103 FAM134B NEO1 FAM46C TRIT1 SLC26A8 CCL5 FBLN7 PCYT1B ZNF664 RORB NHLRC2 LOC730101 RET PARP16 TRAF7 CEP57 NR2F2 PFKM ENDOD1 DCHS1 SYTL1 RMI2 KATNB1 KLRG2 PSTPIP2 ZBED3 C9orf66 AKR1A1 FTSJ1 HHLA2 C3orf80 CR2 TSPAN2 PROSER1 TMEFF1 LPAR3 PPM1H C19orf51 DGKZ SLPI LEPREL4 SH3GL3 SLC38A5 PIK3R3 PDCD2L HOXA10 OSBPL1A POLD1 POLR3B MPRIP RNF144A EEF2K KBTBD11 PODXL NDFIP1 CYP4F2 UAP1L1 CCNJ IL22RA2 SLC25A39 C1orf228 BSPRY CCDC125 ELMO3 LOC652226 MAPKAP1 CAD WDR54 MAP3K15 C12orf75 F13A1 LAMP3 SCLY HN1L SLC27A5 DSG2 TRPC5 TCTA C16orf74 CPXM1 LGALSL
STK33_NOMO_DN http://www.broadinstitute.org/gsea/msigdb/cards/STK33_NOMO_DN GJB6 GJB2 ART3 CYP4F3 BMX ALOX5 ASL BTLA GPAT2 GZMA LOC285758 GPM6A PRAM1 CEACAM6 RASGRP1 VAT1L NUDT11 CHML C2orf68 MATN2 PLCH1 HHLA2 STX11 ZEB1-AS1 RRP15 SHISA2 SPIN4 LOC644480 BACE2 NEO1 VKORC1L1 USP44 BEND6 SLC43A1 JPH1 TMEM55A OBSL1 BTN3A3 LAMP3 PNMA2 C4orf32 ABHD14B IL22RA2 TET1 PLXND1 PPAPDC2 UCA1 CCR10 F13A1 FAM173A DEFA6 SEMA3C LOC649094 DDAH1 GALNT12 SLC26A8 C20orf103 MGAT4A PROK2 HK3 C1orf115 HNF4G PAWR SEPT1 CR2 SERPINB10 SLC16A14 SATB2 CARS2 EGLN3 FDXR WDR18 IL17D TEX15 SLC47A1 LYRM7 NHLRC2 FLT3 TMTC2 HCG11 IL18RAP LOC644295 SLC37A4 KIAA1274 KIT BPNT1 POLD2 HPDL ALCAM FLJ44635 BEND5 TNKS FAM117B LOC283663 SOCS2 PM20D2 RGR PCYOX1 PDGFRL IL18R1 ERVH48-1 RANGRF CHPT1 ENHO PSMG4 LOC202781 CYFIP2 ACY1 RORB FBN2 MAP4K1 KDELC1 HEATR5A HES6 ZNF280C RET VARS ANKLE1 SELL GDA DKFZP564C152 FAM203A BIK GPT2 LOC283070 APEH JDP2 SLC25A32 LRRK2 MOSC1 DHRS11 SETD7 MAGI2 LOC285957 MFSD3 PLS1 SIDT2 ARG1 TMEM45A KAZN LPCAT2 PSPH WDR36 C7orf23 ANPEP CHRDL1 SDK2 ST6GALNAC3 ANXA3 LGR4 CR1 HOXD13 BEX2 KRT81 DSG2 ADCY3 VMA21 C9orf66 TRHDE SLC8A1 ZNF623 STAR OXCT2 C10orf95 FANCE PRG4 CXorf56 SYDE2 TCTA ICK C22orf29 ASNS FAHD2A PROSER1 ATP6V1C2 KLF5 ACAP1 NEDD4 PIGW FCGR3B CDA TUBBP5 LOC642775 SLC9B2 C7orf41 PCYT1B MTHFD2L APOBEC3C NXT2 AIM1 AFF3 MAP3K15 CCR7 BHLHE22 VPS13C FAM54A SLC35C2 ZDHHC23 GPR124 ZNF664 PPP1R1B BCL2 SLC16A4 ACPP PIK3R3 C8orf55 MTR MBLAC2 PCBD1 MTG1 LOC400027 ACOX2 SOBP PADI2 MANSC1 FAM134B APBB2 SLAIN1 MICAL2 SIRPB2 DLX6-AS1 PTGER2 DOPEY2 XAF1 CKMT1A H1F0 EXPH5 ITGB7 PRSS21 CMTM8 TSPAN2 MOGS KATNB1 BTBD11 IGLL1 OSBPL1A FPR2 BDH2 POLR2J2 TCEAL8 DPAGT1 MAPKAP1 TMEM143 RMI2 FONG BSPRY AKR1A1 DGKZ LOC643011 HOXA10 CLEC5A ADSL GALT FMR1 C16orf74 KIAA1804 PCCB SAMD13 LOC255512 ZNRF3 VAT1 PSTPIP2 SLC35F1 POLD1 DKFZp761E198 CD24 PLEKHJ1 GCH1 C9orf103 SLC39A14 SCD HSPA4L TXNRD3 PTPRCAP ST14 RNF144A TRIM58 LOC202451 CAMK1D DUSP5P MZT1 SLC40A1 BIVM FBLN7 MFSD6 FERMT1 ALX3 TIGD1 MAPK14 TPD52L1 LCK EIF2C4
STK33_NOMO_UP http://www.broadinstitute.org/gsea/msigdb/cards/STK33_NOMO_UP RND3 GJA1 FABP4 MMP1 TDO2 HMOX1 ASPH CLEC2B SCG2 PTPRO EGR2 TWF1 TNFSF15 RIN2 ZFP36L1 DOCK4 NRP1 PID1 STC1 GDF15 C15orf48 CXCL2 ABCA1 CXCL3 MIR22HG GNG11 RHOB DUSP1 WNT5A MTSS1 IL1B GPR137B CCL4 FAM70A ARL5B GPRIN3 ADAMDEC1 KITLG CDC37L1 COL6A3 AQP9 IL7R CNIH3 SDC4 EGR3 PTX3 RGS2 C7orf74 HAVCR2 IL1A FOXQ1 PPBP CFL2 BTG2 YES1 SLC12A6 PANX1 GAN THBD ICAM1 ARID5B BCL3 FNDC3A OLR1 SQSTM1 LIMK1 GPATCH2 C5AR1 THAP1 DUSP5 TREM1 C10orf46 CLVS1 GBP3 PLAU FBXL13 ABHD2 HNMT RNF19A STX12 VWA5A MMP10 LY96 CPEB4 TRIP11 ACVR1 DAPK1 RIT1 AUH ACSM3 KLHL28 EOMES IFI16 MIDN MERTK FAM198B HBP1 ADAM28 SEPT10 IL1R2 ARL4C CXCL6 LOC643424 BCL6 KBTBD8 EMP1 OTUD1 PPP3R1 NKIRAS1 ZNF222 LRRC25 NUAK1 BBS12 ZMYND11 TTC30B GFPT1 LY6K DENND1B KMO SPRED1 GNPDA2 GPNMB C20orf194 FOS IL1R1 TRIM23 CRK LOC389023 STAM2 CXCL1 COQ10B SETBP1 KDELR3 C15orf60 RASGRP3 FCHO2 LOC390940 MAP4K3 ARNT2 TM7SF4 GALNT4 RAB12 PPCS P2RY14 SGK1 ZRSR1 IL10RA RNF149 KCNJ2 CD80 LOC284120 ATG14 PSD3 C5orf41 LCOR FAM13A MTMR9 GCNT2 ZEB2 ZCCHC14 SIGLEC9 SIPA1L2 DOLK PHLDA1 TMEM159 PPP1R15A MYOZ2 C5orf20 UBE2W TPSAB1 UPP1 ACP5 LACC1 OSTM1 NEAT1 JAKMIP2 STX6 TGIF1 IL10 EMR2 PTBP2 DYX1C1 KCTD3 CREBL2 CYP2E1 RAB8B MGC16142 HCAR3 HSD11B1 MORN2 SYNJ1 MIR21 DPY19L4 CC2D1B BTG3 PELI1 TLR1 ANKRD12 LOC146795 KIAA1468 USP53 APPL2 ARRDC3 IL6ST MANBAL JUN ULK2 NECAP1 HECTD2 C1QC TLR6 LOC653754 LAMB3 CSRNP1 KCNJ15 PPP1R3B WDR19 SGPL1 TUBB2A C9orf86 CTTNBP2NL SEMA4D UNK TFEC UBE3C ST3GAL1 HIST1H2BC NCEH1 ELK4 SLC24A3 A2M KYNU IER3 CAPRIN2 CAB39L JUNB NRAS EFNB2 EPAS1 KLF6 MGAT4B C12orf44 MAFF FCRLB KIAA1279 WDR20 HECW2 FAM134A AKTIP PTPLAD2 SAR1B BTBD7 MAP3K8 WHAMM FAM199X KIFC3 STK17B TNFAIP6 NR1D2 CLEC7A PTGFRN CADM1 ZNF238 TBCEL MEIS3P1 PTPN3 HIST1H2BG GNA12 CAMK2D NPEPPS PGBD5 NAMPT HINT3 CGRRF1 CCL20 ZFP36 WBP2 C3AR1 GLIPR1 DDIT4L FAM114A1 IRS1 ZIC2 FBXO32 RNASEL SLC11A2 TM6SF1 SAMD9L KIAA1467 UEVLD CD300C DAB2 KIAA0232 SOS1
STK33_SKM_DN http://www.broadinstitute.org/gsea/msigdb/cards/STK33_SKM_DN RXFP1 SHISA2 MOSC2 PLCH1 JPH1 TNFSF10 SERPINB10 OGDHL BTLA SLCO4C1 SERPINB2 LOC645919 CYP4F3 NLRC3 ID3 TPD52L1 GPRASP2 CACNA2D3 LOC283663 TMEM45A RGS16 BACE2 BCL2 MOSC1 CARS2 GAS2 BEND5 CAMK4 NFE2 UCA1 STAR CDC42EP3 C6orf192 SPIN4 LOC644480 SLC6A15 PPP1R3C GABRA5 SERPINB8 HSD17B8 KCNN2 C7orf41 ABLIM1 TMEM55A SYDE2 SH3D19 CCDC26 ACAP1 MGC2848 C1orf115 C10orf95 ASNS TEX15 BPI CCL5 MS4A3 VKORC1L1 STC2 CHPT1 FAM65B AIM1 LPAR3 AFF3 C6orf147 ELOVL6 CA8 ADCY3 TMEFF1 DDIT4L CAST ACOX2 VCL PIK3CB FAM46C ARHGEF26 MUSTN1 APBB2 ANPEP GPR84 ORM1 MAPK14 DHRS11 FAM117B KLRG2 ALOX5 FLT3 NPR3 CD3D DHRS9 DEFA4 TBL1Y SH3GL3 ZNF829 PADI2 PROCR CDA SLC35F1 C1orf106 KDELC1 WDR36 MGC14436 CHML SLC43A1 LOC100129603 FBLIM1 OXCT2 CRIP2 C4orf32 GABRA4 LOC340107 ABHD14B GRB14 PAWR PDCD2L CRIP3 CXCL16 MCTP2 PROK2 OBSL1 PCDH8 PODXL FAM84B TEKT2 RAPGEF5 PHACTR3 LOC642775 TRIT1 DZIP1 SH3BGRL2 ZEB1-AS1 PRDM11 C10orf128 WDR18 GPX7 GPM6B CCDC125 ANKLE1 RPL3L TBC1D30 TONSL PRKAR2B SPRY1 PRSS50 POLR3B STBD1 TEAD4 C19orf51 MREG C2orf68 ZNF134 LILRA2 SPNS3 LOC653605 MSRB3 SPIB ZDHHC23 FAM186B KIT SLPI PSPH TSPAN13 EPHX2 CYP7B1 SORL1 KAAG1 CYFIP2 HBA2 PCBD1 ACP6 SPP2 PFKFB1 ALDH1L2 TMEM173 LOC84989 MYO1B FERMT1 THBS4 LOC652226 PARP16 MARCKS PRTG ZMYM6 ASL BICD1 PLS1 SPNS2 UAP1L1 ZBED3 CLTCL1 OR2W3 LOC285957 SV2A KIAA1199 MTR DPH2 LOC730101 BEX2 GPR37 MOCOS BANK1 NR2F2 ABO LAMB3 HMGA2 ANKRD2 SETMAR LRRK2 ACY1 NUDT11 CALD1 PPM1H TMEM143 C3orf70 TUBA4A LEPREL4 PRSS1 RAB38 PSMG4 ZFP57 POLD2 ADAMTS5 RSAD1 SCD TMEM144 CDH7 IL12RB2 LOC389023 PRAC KCNN3 LRRC34 ZNF488 CC2D2A FAM203A PCCB FOXP2 C3orf80 RANGRF TANC2 C4orf19 GRB10 PFKM KRT23 MTG1 TRAF7 FLJ44635 PYROXD2 SLITRK5 SNTB1 CRIM1 TANC1 MANSC1 RAB27B GBX2 PWP2 EEF2K BMX YDJC LOC388942 C1orf228 TXNRD3 CXorf57 BMP2K PDGFRL CCR2 C15orf44 NID1 CDK8 C7orf23 ICAM3 SYNJ2 SLC39A3 LYRM7 FRMD5 GALNT12 STK33 N4BP2L1 BPNT1 ATP8B2 NKX1-1 SBDS C7orf58 TNFAIP8 CTSL1P3 MGC50722 TPD52 SLC25A32 KAZN PCGF2
STK33_SKM_UP http://www.broadinstitute.org/gsea/msigdb/cards/STK33_SKM_UP MPEG1 FABP4 RND3 P2RY14 PTPRO MAFB TFPI CLDN1 CCL4 TFPI2 CDKN1A PKIB PPP1R17 BTG2 ITGB8 GNG11 PID1 TFEC HIST1H2BG SGK1 CREB5 TP53INP1 THBD HIST2H2BE TMEM71 MILR1 FOS TYROBP TWF1 HIST1H2BC EGR1 TLR1 RGS1 CFL2 IL1B HBEGF ASB2 LY96 ST20 CD36 C4orf34 HIST1H2AC DNAJC15 NBEAL1 DYX1C1 NOV MIR21 FNBP1L HIST1H2AG PRTFDC1 DUSP8 GPR137C FAM177A1 CD101 BCL2A1 HIST1H2AM HIST1H3A SAMD8 SLC12A6 HIST1H3B SIPA1L2 CPEB4 IL10RA DUSP5 LOC644250 PLK2 GBP3 ANXA1 GPR65 LMBRD2 GLIPR1 HIST1H2AL KIAA1659 KIAA1841 HIST1H3J MYBPH CXorf23 ASPH SULF2 ACTA2 KMO KLF6 PHLDA1 LOC284757 CMTM1 HMOX1 ZFP36 KLHL28 C5AR1 STX12 LOC284801 KIAA1107 CPEB2 NLRC4 KIAA0895 FCAMR RAB7B CA6 HIST1H2BD IRF9 HIST1H4H N4BP2L2-IT1 TLR6 TMEM107 LFNG RHOC TTC30B ZNF117 THAP1 CYBRD1 PRKY TRIM23 RTN1 GPR34 MAP2 ADORA3 SETBP1 C13orf15 MFAP3L SQSTM1 TRIB1 ZBTB6 APPL2 ZNF254 FAM20C LOC100505968 IL1A GPR183 MORN2 ADAM28 GPR135 OLR1 DAAM1 FLJ12120 UNK HINT3 NCF2 C5orf41 C10orf54 DUSP1 ZCCHC14 CDKN1C ANP32A-IT1 WDR19 LOC440309 RHOB TLR10 SNORA68 BMF ACSL6 KCNJ2 SLC38A6 BTBD7 LPAR6 HIST1H2AE LRRC37A2 NINJ2 SNX16 MYEF2 OLIG1 CRK MPPED2 CALHM2 FGL2 RCBTB2 PLCXD2 FGR SYNJ2BP SERAC1 HIST1H3H CTSK AMN1 RIT1 VSIG4 OR52K3P NAMPT TBC1D8 GK3P AFF4 LGALS1 AMMECR1 ZNF678 CDC37L1 TMTC3 HIST1H2BJ FCHO2 RNF19A UPP1 GBP2 FAM131A TP53INP2 ZNF718 STAM2 TK2 EVI5 FCHSD1 UNKL ACRC NAPSB C12orf35 ZNF763 MGC12935 ARL5B RASGRP3 RNF19B ERMAP RGS2 TMOD2 ZMYND17 MIR22HG CD9 ADM LOC644656 GPR137B HIST1H3F LCOR IL15 RNF141 ZNF682 CYBB HIST1H3I MFAP3 MIDN ARID5B PLAU FGD4 GDPD1 GPR132 DPY19L4 SYCP2 ARRDC3 LPXN TTLL7 PTPRM ETV1 ZNF432 SLC7A11 DYNC2LI1 UBE2W ANKRD57 IFI16 NECAP1 CD58 LOC643072 ZNF407 ARHGAP42 MNS1 ATRX STOX2 TNF IRF1 CMTM3 CD53 LOC285147 PALLD TRIP11 NFXL1 PPCS NMNAT1 CEP19 SUCNR1 JUNB TGFB1I1 HECW2 DNAJB4 TCTEX1D1 OSBPL11 MFSD9 BCL3 TNFRSF21 MXD1 C20orf197 HIST1H2BB TNFAIP2 EPB41L5 EMP3 SKIL TNFRSF11B ZNF675 PLXNB2 ERRFI1 LOC727815 CD86 STX6 SH2B3 NFKBIZ KITLG CYTH4 NFKBIA BBS12
STK33_UP http://www.broadinstitute.org/gsea/msigdb/cards/STK33_UP FABP4 RND3 PTPRO CCL4 PID1 TWF1 MPEG1 GNG11 P2RY14 ASPH HMOX1 BTG2 IL1B THBD MAFB TFPI CFL2 SGK1 FOS GJA1 CDKN1A TFEC PPP1R17 LY96 PKIB CLEC2B HIST1H2BG SLC12A6 CLDN1 TLR1 HIST1H2BC MMP1 TFPI2 DUSP5 TDO2 DUSP1 RHOB GBP3 CPEB4 TMEM71 TP53INP1 DOCK4 C5AR1 MILR1 EGR1 MIR22HG IL1A DYX1C1 MIR21 RGS1 GPR137B ARL5B CDC37L1 THAP1 STX12 SQSTM1 KLHL28 OLR1 EGR2 SIPA1L2 CXCL3 CD36 IL10RA KMO RGS2 ASB2 KITLG CXCL2 TTC30B PHLDA1 ARID5B ADAM28 TRIM23 HAVCR2 AQP9 FAM177A1 NRP1 BCL3 GLIPR1 NBEAL1 RNF19A CD101 PLAU RIT1 HIST2H2BE KLF6 GPR137C FNBP1L TREM1 ITGB8 PANX1 FNDC3A TLR6 ZFP36 CRK TYROBP MIDN TRIP11 C5orf41 ICAM1 IFI16 ZCCHC14 DUSP8 APPL2 KCNJ2 MORN2 CNIH3 ZFP36L1 C4orf34 STAM2 MTSS1 C10orf46 FCHO2 TNFSF15 GPR65 UNK ABHD2 RASGRP3 GPATCH2 HBEGF WDR19 CREB5 HIST1H2AC ABCA1 FCAMR BBS12 GDF15 UPP1 IRF9 GAN LCOR HINT3 DAPK1 PPCS BTBD7 HBP1 KIAA1107 GPR34 ACVR1 SPRED1 UBE2W KIAA1841 SAMD8 LOC644250 N4BP2L2-IT1 HIST1H3A DPY19L4 ZNF117 CPEB2 LIMK1 TRIB1 ARRDC3 LPAR6 NAMPT NLRC4 NECAP1 RAB12 NCF2 STX6 C20orf194 NKIRAS1 KBTBD8 BCL6 FAM20C VSIG4 LMBRD2 KIAA0895 MAP4K3 TGIF1 SCG2 C7orf74 ZNF222 SNX16 SLC38A6 ACSM3 BMF FOXQ1 JUNB SYNJ1 CC2D1B ADAMDEC1 LOC284801 PELI1 HECW2 GFPT1 C15orf48 CSRNP1 SULF2 ANKRD12 PRTFDC1 CMTM1 LFNG GNPDA2 ZEB2 MTMR9 USP53 EMP1 ADORA3 C15orf60 RHOC NCEH1 CD9 BCL2A1 JUN ST20 PLCXD2 DAAM1 ATG14 EGR3 ADM PPP3R1 TTLL7 WDR20 SLC7A11 BTG3 AUH STC1 PPP1R15A MANBAL NOV ANXA1 LOC643424 HIST1H3J SNORA68 CMTM3 NFXL1 CYBRD1 CXCL1 MYOZ2 PPBP OSTM1 RNF19B MAFF AMN1 KYNU FLJ12120 COQ10B GALNT4 LOC338758 ZNF238 TRAC ZMYND17 HIST1H2AM LOC284757 ZBTB6 RIN2 KIAA1659 NUAK1 TNF AFF4 FAM70A SETBP1 VWA5A AKTIP WBP2 GPRIN3 FGL2 GLCE RNF121 BTN2A1 C10orf54 IL6ST LOC440309 GPR135 DYNC2LI1 ZRSR1 RTN1 TLR10 MEIS3P1 LRRC25 CLVS1 COL6A3 ATXN1 RNF149 NME7 HNMT SOCS6 SOS1 WNT5A SEPT10 FAM198B CYTH2 OTUD1 MGC16142 KIAA1468 ZMYND11 ANKRD40 MFAP3 RNF141 CDKN1B DNAJC15 UNKL SAMD9L
KRAS.AMP.LUNG_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.AMP.LUNG_UP.V1_DN DBF4B CBL SPAG11A ZNF480 RAG1 DGKQ CXCR2 FAM164C ZNF134 GP1BA PROM1 HOXC11 C22orf46 HBA1 MXD3 CYP2C18 GRIK5 HIST1H1T CEP41 CHL1 C19orf73 SLC5A2 CTF1 HEY2 PODNL1 INPP5D KREMEN2 FCGR2B P2RY4 ADAM2 SYNPO2L TBR1 CACNG1 RBFOX1 ICAM2 TBXAS1 PPFIA3 WDR33 PTPRH SCARF1 GPR17 USP53 CORO2B NAT2 EPYC ST20 AATK ADRA2C GNAZ DRD5 TRHDE GDF10 PDE11A GMIP LOC644951 PLCB3 CRY2 LOC100507605 BARX2 GCNT3 LILRA4 ENPP1 GDF2 MMP13 SETD1A IL12B GPRC5C HOXC8 HDAC7 MLL PLCH2 ODF1 PAIP2B ZNF862 FLJ14082 SCN10A PYHIN1 EMILIN2 SNCB STARD8 PDCD1 HIST1H3A FGL2 SHANK1 CD300A GABRB1 RPA4 POU2F3 HIST1H2BJ IFNA7 ALDH4A1 SLC6A16 CAMK1 GVINP1 DTNB WISP2 TRMT2A SLC19A3 CEND1 EMR1 CPLX2 CD34 FSHB ABCD1 RAPGEF3 RELB SDS KRT32 KIAA1967 TSGA10 DXS542 HTR1D GNAT3 CACNA1F C2orf54 H2AFJ DCC EPB41 PRODH C5 CCDC82 RHOBTB1 TF PGPEP1 IGF2-AS APC2 DPPA4 DNM1 IFNA10 CLDN16 PPM1H ACE SNTG1 ALDH1A2 KCNN1 KIAA0664L3 HHLA1 CA1 TLR4 SYNGR3 MC2R ABCB8 OVGP1 CGREF1 ADAMTS5 P2RX1
KRAS.AMP.LUNG_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.AMP.LUNG_UP.V1_UP GPR25 SPINK1 CD247 NELL2 TDRD1 C8orf59 PNMA3 NPHS1 EFCAB6 ZNF835 FKBP6 DLX5 RPL23AP53 CSN2 NPBWR2 FCER1A MAGEA6 HSPA1L GABRR1 CCDC57 VTN PIWIL1 LRRC37A NMUR1 LPL NDOR1 PPIEL CLSTN3 NPHP1 UGT1A10 CCT8L2 GABRA6 TNNT2 RAB30 OPRK1 FAM30A HCN4 CYP3A7 HIST1H2BN LENEP MAGEA12 CLEC4A GATA1 ASIP GNGT2 C8B FCRL2 MYOZ1 EFNA3 GPR44 SPTA1 GRP SLC25A31 CLSTN2 DOCK3 SDCCAG8 FGF7 VENTX LY75 C8orf39 HSD3B2 ABCC6 B3GNTL1 SLC7A9 GABRR2 ALLC HPR OTOR ATXN3L TUBA8 SOX12 JAK3 TTLL3 CRYBA1 CLEC5A KCNC1 BMPER EFNA2 FLJ14327 C10orf81 RCAN2 CEBPE HECW1 NPAS3 LRRC37A4 PAX4 HSPA6 TMEM35 FAM155B CFHR5 SSTR1 NOVA1 FCER1G F13A1 OPN1SW CD3E OSBP2 ATG10 MMP15 ST3GAL6 LOC651803 PRKG2 HSF1 MAN1C1 SLC6A6 CAMK1G SLC2A4 SLAMF1 C22orf43 REST SPP1 ST8SIA2 C3AR1 CELA2B HIST1H2BB AFP SLC26A4 ABCG5 GCKR DEFA5 AKT2 XPNPEP2 HGFAC IL26 DUSP9 BTG4 ZNF257 CCL11 MCF2L NGF EGF PAGE4 GPR6 NAG18 DKFZP434C153 DYNC1I1 MAGEB1 C11orf16 SEMA3E KLK14 GIP GPR68 CA5A FAM174B
KRAS.DF.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.DF.V1_DN PTGS2 LCP1 CLDN1 COBL IGFBP2 CXADR KLF11 TAGLN LAMP3 ROBO3 EPB41L4B FBN2 PSPH SLMO2 BCAM SP2 AUTS2 IL24 TNFRSF9 TRA2A PDGFA TMEM45A RNF39 ADRB2 PTPN14 OR7E47P EXOSC7 SYP WASF1 TNC SLC25A13 TMEM168 MMP25 CBX4 ALG13 DUSP2 KLF4 THNSL2 OMG TAF4 CNTFR ARHGAP26 CYP2C9 PYY2 CNR2 RDH16 MEX3D HDAC9 LSM14B KIF21B PGLYRP4 KLK2 COPZ2 OGFRL1 AHR RAB3IL1 RNMT NEUROD2 ODF1 GLIPR1 URB1 KLK8 HOXC8 OR1F1 GPATCH2 RNF186 ZFHX3 BDKRB1 WNT6 PER2 IFNA17 PAK3 HMGN3 MAVS SYNE1 SP1 C1orf109 ZNF239 FANCE MYO5C SLC30A3 TNXB KLK5 RNF122 THUMPD1 EPPK1 CHRM5 SEMA6A LANCL2 HOXA11 HUS1 SIGLEC6 NUPL2 MPP3 SMAD6 ARID3B CD2 SPINK5 COG5 UCHL1 MLLT4 TJP3 GJB4 NCR1 VWA5A SLC17A1 SEMA3C SPRR1B C6orf15 CLDN17 SIRPA PAPPA2 ZNF764 RNF43 TRAPPC10 DCAF10 ACTL6A DEFB4A NUP153 HSPB6 TUFT1 ATP2B1 RPRM LCAT HIST1H2BH HIST2H2AA3 HPX CTAGE9 MALT1 ARFGAP1 KIR2DL5A PHF7 TSPYL1 CAMKV BRP44L KIR2DL1 OR10H3 MXRA8 ZNF512B ALOX5 FAM63A KDM6A SMAD7 STX3 PRSS8 SEZ6L PCBP3 LRRC61 ERN1 CYP1A1 CDK18 SMAP1 FAM153A GAP43 GCC1 ETS2 RET HOMER2 TCL1A PCLO POM121 SCN2A PRAMEF5 NRP2 TCFL5 SSTR3 KLF15 DVL3 C3orf14 MAP7 TGFB3 PAX5 HTR3A COL4A5 PTGER1 HRH2 RAB6B PRAMEF10 C6orf145 MAS1 BMP4 CYTH4 SRF LETM1 CDK20 SF3A2 C12orf49 MOGAT2 ALOX12P2 COL11A2 LYRM4 NGF IGFBP3 LLGL1
KRAS.DF.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.DF.V1_UP IL1RL1 MMP1 IL13RA2 CCL20 SRPX BMP2 SLC26A2 INHBA HCLS1 TSPAN5 ASPH BBS9 TLR2 PRG1 PRSS3 ELK3 GFPT2 COL6A3 GNG11 VEGFC ZMYND8 NRP1 VCAN CXCL3 TMEM158 CSF3 GSTT2 GALNT6 TFPI2 RASIP1 PROCR S100P CLPB INPP4B CCNG2 KIF3A DSN1 PTPRG IFI44 GLRX PID1 CXCL1 TMEM135 FLRT3 GK3P SPAG4 SMYD3 ISG20 EIF4B CLDN5 IFI44L AKT3 AKR1C3 LOXL2 ZNF654 SERPINB1 CDA KIN ALDH7A1 CAPRIN2 IFIT1 RGS2 FKBP1B ANKRD36B SAP30 IFITM1 CPVL EMP3 MED24 KHDRBS3 BMP6 PPAP2C PDLIM2 IFI35 DPYSL2 ALDOC RRAD STEAP1 E2F8 GNE LTBP3 SPRY2 SCG5 LOC653127 CUTC MAP3K6 TM4SF1 OPLAH IRF9 ETNK1 SLC2A10 SLC22A4 DNASE1L1 PXDN SEC24D STX4 ETFB C7orf10 TP53I3 RAC2 LGALS3BP BMPR2 CUX2 SERPINE1 PITPNC1 DLGAP4 GATA6 ANKRD46 CDKN2B FAR2 DKK1 DDB2 CHRNA5 G6PD HRSP12 HSD17B2 CBR4 GCH1 PDPN FADS2 TIMP4 PPP2R3B ADAM8 LRP8 FAM168A ACADVL SLC4A7 ING2 ARHGEF3 DPYD MVP TUBG2 PLAT CBLC ALDH1A3 IFI27 TBC1D8 CCNT2 CD97 IL8 RGS17 HS3ST3A1 PLAU GREM1 ANPEP LOC81691 CCDC85B TMEM160 ATP9A AURKB CXCL5 PLCH2 MTAP CAT SMARCD3 EHBP1L1 BORA BCL3 PLIN3 TRPC1 JAK2 FAM173A GLS2 PELI1 SCAND1 SMARCA1 RPS6KA5 MUM1 CRYZ CTNNBL1 SMTN MPI BCL2L1 BEX4 QPRT STK4 CORO1A INPP5F GLMN OBFC1 HSPA2 ABHD10 DLGAP5 AKAP12 ASMTL CALHM2 HERC5 PPM1D FUT8 BCL6 NAT1 RETSAT UBE2W
TBK1.DF_DN http://www.broadinstitute.org/gsea/msigdb/cards/TBK1.DF_DN ELL2 BLMH GOLGA4 TBK1 SERPINE2 AGFG1 TMOD3 ADAM10 UBE2W SLC26A2 CCNE2 BMPR2 ZNF395 RPS6KB1 YES1 IRF2 SRPR SEPHS2 NUPL1 SCARB1 STOM ANKRD57 HIST1H1D CDCA4 GALNT7 COL4A1 CDK6 GJA1 TTI1 TEAD1 ITGB6 PDHX UBL4A MBP SLC39A8 BPTF GAS1 ERAP1 ANKRD11 COL4A5 SLC6A8 MYO6 CCND2 ITCH DSN1 DCAF16 PPCS ALDH9A1 DCP2 KIF14 C1D ERLIN2 THBS1 RNF5 IGF2BP3 GOLGA2 MTR DENND1B CCDC41 CUL5 BNIP2 HMBOX1 CXADR HIPK2 FNBP1L CRK RSRC1 NME6 DICER1 DCK KLF5 HOOK1 COASY RBBP5 CBX6 C5orf22 TSPAN5 BDH1 ACAP2 CHMP2B PMEPA1 ITGA2 CCDC99 MTPAP NIP7 MIS18BP1 ROCK2 SMC5 TERF2 GTPBP8 KIF3A TTPAL GNE ETNK1 KLF13 UFL1 CLOCK UBXN4 AK4P3 COPS4 ATP6V1C1 COL17A1 SLC22A5 DSC3 IFIT1 DNAJC16 ZZZ3 SMURF2 LMNB1 DKK1 RRN3 YTHDF2 MPHOSPH9 PCYOX1 CASP6 SLC25A13 PLEKHA2 FLRT3 RALA EXPH5 HIST1H1C PKP4 BRWD1 DDX60 C12orf43 HOXA1 TAF15 SMG1 CBX5 NAA35 RCC1 USP46 SNTB2 KIAA1598 MRPS33 NEK7 HIPK3 GEMIN4 ZNHIT6 CDR2 EHF PDGFA RXRA RRN3P1 EXOC5 RPAP3 LMO4 NCOA3 CLEC16A MST4 PRKD3 MSH2 WHSC1L1 NEK1 BCL2L1 HRSP12 BACH1 ANKFY1 VRK1 IL1RL1 LUC7L3 PRKRA RSF1 ZNF654 THOC2 AMMECR1 TLN1 ZKSCAN1 FAM115A SIKE1 GNAI3 POLR3B RIF1 HNRNPA0 PANK3 ATP2B1 TBC1D10B ALDH3A1 MED13L CDC27 NSMAF TRIM23 SEC63 HIST1H4C PAFAH1B3 HMGCS1 RFX7 PRRC2B SLC37A4 USP22 AP1AR NLK ZCCHC10 IDE HIST1H1E CD2AP TFAM NAA15 DNAJB14 MTAP CCND1 SEMA3C SLC35A5 MFSD6 ATP6AP2 RFWD3 KTN1 GNPDA1 SLK TNRC6B LEPREL1 KLF7 LETM1 TTBK2 UGGT1 CAMK2N1 LRIG2 RMND1 CBFB ESF1 PPIG PLEKHA1 FOXA2 GOLT1B RCBTB1 AKAP9 KPNA6 NF1 LIMS1 SDPR RLF LIAS IL1RN SMARCA2 ZNF557 MAOA PTGES PCBD1 OSBPL1A KDM4A CCNG2 CLN5 FAM164A MINA SPRY2 PMAIP1 C15orf29 ATG2B ZWINT MPDZ PSMB8 ARMC1 LSM14A ODF2 IMPACT SCAF11 SMAD5 GTF2A1 SNX15 SPIN1 RBM4 ANGPTL4 RAI14 NFYB ADCY6 AFF4 MTA1 COL5A2 GALNT3 PSMB9 GALNT11 KIAA1467 APPL1 UBXN8 BPHL KIAA0247 PROSC NRIP1 OSBPL3 DNAJC3 KCTD3 TCOF1 PNISR FOS NDUFA13 INSIG2 ARFGEF2
TBK1.DF_UP http://www.broadinstitute.org/gsea/msigdb/cards/TBK1.DF_UP FZD6 TMED5 TRAPPC2 EPB41L4B GCH1 ACVR1 IGF1R DNMT3B PCLO RB1 S100A8 SPOCK1 TUBA1A RAD51AP1 IGSF3 PNP CIB1 LANCL1 CDK8 FAT2 RNF103 IL1A C11orf57 GPR107 ICT1 PID1 PPAP2C SACS ARAF CYBRD1 CDC42EP3 OSTM1 ITPK1 FAM57A RIN2 FAM69A TNS3 LRP12 CLCA2 CCDC6 PEG10 ADCY9 IL1R1 NUP62CL LINC00342 TMEM40 STEAP1 C3orf64 ATP11B STX12 EML1 SNX24 TPST1 SLC37A1 VCAN MMP9 PXDN LSM6 DAAM1 DUSP5 FEZ1 ZFYVE16 TP53BP2 UXS1 PELI1 SLCO3A1 RGS20 TUFT1 TRAK2 SLC39A6 OSBPL2 ZC3H12A STAM CHGB PLAU WWTR1 G0S2 GCC2 SERTAD2 CIAPIN1 BTG3 CORO1A LSP1 GNG11 NCK2 NGFR CKB TBC1D13 GRINA HMOX1 CCDC165 KLF11 BID SWAP70 MEX3D OCRL PTK7 CASP7 GLTPD1 OPN3 EXTL2 PIP4K2C DNAJC17 SLC38A6 SNAP23 TMEM45A LAPTM4A USP10 IQCK RAB4B TGFA MYBL1 EIF2C3 RABGEF1 PLAUR KIAA0415 RGS3 ANPEP NETO2 SLC30A1 GTF2E1 DMTF1 SAA1 CCDC109B C1GALT1C1 TUBBP5 KIAA0355 RPL23AP7 DLG3 IL8 GALNT10 CNNM4 EIF4B CLDN4 NFKB1 RUNX1 TNFAIP8 TMEM104 EFNA1 PTHLH PTK6 LPXN ADAM8 CHD9 MCAT SNX10 RLN2 ENDOD1 C3orf52 SLC35A2 ACYP1 STEAP1B NFYA FKBP1B SCO2 PHF10 TEX2 GINS1 CREM INPP5F RAB21 SNCA PLEKHF2 RNF38 HBEGF C3orf14 CRIP2 TNFAIP2 ATP10D EMP3 CD83 CCNJL MKL2 AVL9 TP73-AS1 DERA NFKBIE DAB2 C9orf3 BBS1 GPHN GCA TP53I3 CAMK2G SERPINB13 PKNOX1 SH3TC1 SIRPA PPP2R3A MINPP1 ARIH2 ATPAF2 RRAS MAST4 DEGS1 RIT1 TNFAIP3 RHOBTB1 RNGTT CGRRF1 PCTP ENDOG PPP3CC PHTF2 MAP3K2 NME3 SPRR1B ISL1 MAST3 TMEM41B NF2 GTF2H1 SLC33A1 C16orf5 NT5C2 TTC33 ATF3 SNX11 ANXA6 STX3 AKR1C3 PROS1 GALNT12 ABR SRPX VOPP1 TBPL1 PAQR3 ITGAV GOLGA8A TUBB2A PRPF4B BTG1 FAM63B DCUN1D2 UBA3 HSPA2 TMEM50A SCHIP1 RABIF CD97 TFE3 SLC2A3 PASK DUSP3 DNAJB6 ZDHHC6 SLC39A4 NRBF2 CRABP2 IFT57 CCDC68 PIK3CD NUDT4 TRIM36 TNFRSF10B GOLPH3L MICA SAP30BP FERMT2 CSGALNACT2 LIPG GPX2 ENO2 HSD11B1 P2RX5 TIMP4 DDAH2 MGLL GPR56 VAMP3 BEX4 RAB7L1 CHIC2 CXCL2 TRAM2 C6orf145 SLC2A10 NFIL3 PRSS3 DUSP14 LIPT1 C11orf75 MREG TMEM184B ANKMY2 TNFAIP1 KCTD14 DPY19L1 ARAP3
TBK1.DN.48HRS_DN http://www.broadinstitute.org/gsea/msigdb/cards/TBK1.DN.48HRS_DN IER3 PDHX EGF CRYZ PDGFA KIAA0100 RGS2 PLEKHJ1 H2AFV GALE DUSP22 BIRC5 TOR1A GNA15 PAFAH1B3 DLD ITGB1BP1 RALB UFM1 ATG3 CTNNAL1 DCK ATP6V1D ANKRD10 MSRA INPP4B BCL2 BPHL PPOX DUSP4 IL13RA1 BIRC2 COL4A1 STX1A AKAP8 ST3GAL5 PSMB8 TERF2IP PRKCQ COASY CPNE3 RALA RAD51C CDK1 TRIB3 ABCF1 XBP1 GTF2A2 HSPA1A MAPK9
TBK1.DN.48HRS_UP http://www.broadinstitute.org/gsea/msigdb/cards/TBK1.DN.48HRS_UP SLC11A2 ECD APOE FKBP14 MAP3K4 IGFBP3 CHEK2 ARL4C LRPAP1 TEX10 FCHO1 PSRC1 APPBP2 OXSR1 FSD1 MYCBP LBR ZMIZ1 TM9SF2 EDN1 CDK4 DUSP3 COPB2 PIK3C2B MYLK RBM15B MLEC CEBPA UGDH TIMM22 TP53BP1 UBE2J1 MTFR1 UBQLN2 CDKN2A CALM3 CNDP2 TMCO1 SOX2 P4HTM CXCL2 SCP2 DDR1 RNMT CNOT4 BAMBI PTK2 KIAA0907 CHMP6 SDHB
NFE2L2.V2 http://www.broadinstitute.org/gsea/msigdb/cards/NFE2L2.V2 LOC729779 CCDC138 STAT4 PKI55 CDC45 SLC7A11 SDS TRIM29 ST8SIA2 HRK NQO1 UGDH FZD7 LEF1 IGFBP3 GPR32 SQSTM1 MPPED2 FAM5C PGD SULT1E1 EMP2 WNT11 EFCAB11 CCL17 DHFR UCHL1 IMPACT CHAC1 AXIN2 STATH DRD5 PFN2 VSIG1 ALB ARHGAP28 MTBP ALDH3A1 TALDO1 ECM2 SHMT1 UBE2N ATP5G3 NR1I2 AIFM2 ALDH3A2 ZNF486 ZNF326 ESR2 UBE2D1 C1S CXCL12 MCM10 AGT PNPLA4 TRPC2 PARL HLA-DOA HLA-DOB FGF7 LOC100126582 FGF7P2 HYAL4 GPR135 VTN ASIP KIAA1430 AKR1C3 NLN SLC5A11 ABCB6 VPREB1 TM4SF20 LOC100133920 TNFRSF11B ASNS CHRDL2 OSGIN1 LOC729409 BCAT1 HPN SUV39H2 ZNF714 PCK2 SMPX CKAP4 DGKG STC2 POM121L12 TRIML2 GPX2 HJURP HPDL BCAN PIP GAS7 ADH6 STYK1 LOC344887 ACOT11 ENTPD6 ADRA1A HRG NEIL3 WHSC1 LY86-AS1 METAP2 TDO2 FGA SLC47A1 ORC1 C14orf177 FECH IQGAP2 LOC340888 SCGB1D1 BRIP1 OR56B1 IL18R1 GCKR LOC728485 MTHFD2 C14orf149 TYR TYRL LOC100130902 TXNRD1 GLP2R GCNT3 MRO RESP18 F2RL2 F5 NFE4 ME1 KCNE4 NUMBL LOC647157 PPFIA2 FTHL17 FNDC9 ANKS6 NQO2 CYP4F8 DBF4B CBS CBR1 ZNF135 CBR3 GAS2 TM9SF3 JAKMIP3 FGL1 FGG ZNF430 L1CAM FLJ22184 PTPRZ1 RANP6 ITGB8 KIAA0232 DDC IDH1 IDE AKR1C1 SHISA2 ABHD4 MCM3 MDFIC PSAT1P1 PSAT1 HLA-DQB1 LOC100133583 WDR87 LILRA5 CALCA FIGF SRXN1 SFTPA1 CBWD1 CBWD6 CFI NINJ2 CCND3 TNFSF15 GRM5 SFN EPHX1 CPXCR1 GPC1 DNAH8 NR0B1 ZC3H12D RTKN2 MRAP2 PEG3-AS1 ZIM2 PEG3 FAM178A DMD GPCPD1 PRSS38 SCUBE1 GLA ALDH7A1 KIAA0494 CD101 KCNQ2 KRT8P41 IL10 TXNRD3 SERPINA12 FTLP2 FTL RDM1 NRG4 GSTA2 HSPB3 TREX1 IL3RA GSR RRM2 GCLC ADAMTS12 SYK KIAA0040 FUT1 TNIP3 SRI NDUFC2 GCLM SPTB GRPR OFCC1 CYLC2 HMOX1 WDHD1 G6PD OR8H1 DEFB1 UBXN10 XYLB SREBF1 STXBP5L FXYD7 CSTA INADL MACC1 HGD NRCAM NUTF2 KIAA0319 CYP8B1 TPD52L1 REEP1 TP73 ODF3L1 ZNF649 SMC5 FLT1 FAM69A PTDSS2 METTL3 GSTA5 CEACAM7 SEMA3G SLC48A1 SPPL2B DPPA2 PLXND1 KPNA5 SMG6 MAFG LOXL3 MYL2 C1orf21 PRSS53 ACTL8 ELAVL1 KIAA0368 NFE2L2 SMAD9 SPG20 TMEM237 PRG4 CRTAP ZNF429 RPLP2P1 NT5DC1 REPS2 MFI2 MCF2L-AS1 LCN2 B4GALNT1 TPPP3 OR6K2 HYDIN OSCAR TECRL TET1 NAV2 MC2R PALLD FLJ37201 HAO1 PTPMT1 LOC652799 LOC653882 KIT PAPL MGST1 FERMT1 LEP MPP3 PRR5 ARHGAP8 PRR5-ARHGAP8 DDX43 SLC2A9 LOC440335 SCAMPER KIF5C IL17A NEDD4 USP6 CHST9-AS1 LOC100287639 CYP4F24P CYP4F12 OSTF1 SLCO2B1 TKT CYP4F3 MAP2 MOG NAP1L1 HDAC9 HTATIP2 RNF212 AGXT2L1 TLR4 FTH1P3 FTH1P16 FTH1P20 FTH1 C11orf52 GPNMB FAM86DP MARS FLJ35024 SF1 FAM167B CAMK1G PCSK9 AKR1C4 SIAE RIMKLA DBF4 ICMT SUB1 LRP8 SNTG1 JDP2 SLC15A1 CYP4F2 CDH12 HECW1 KRTAP4-1 RAB15 NCF2 PDZK1 PIR MMP7 P2RY6 UBE2D4 GCRG224 PA2G4 PA2G4P4 SRGN SPN SPP1 C1orf186 CAMK1 BCAS1 SCARA3 GGA2 CPLX2 POU3F3 CPLX1 LANCL3 DUSP13 TSPAN7 TSKU OR10H3 PCSK6 SOX2-OT MUC5AC HVCN1 ESCO2 GPT2 BCL2L11 ACVRL1 TMEM18 TEX19 PDE6B GNE ZSWIM6 CNTNAP5 VIL1 PHLDB1 LRPPRC CYCS TMEM64 NUPR1 RHOXF2 UNKL ZNF143 CIB4 GPR174 KIAA1324 NKPD1 MED29 RFX4 SLC2A4 PPIAP22 PPIA LOC439953 RABL3 ABCC2 ALOX12P2 TF ZNF367 PHGDH SPDYE3 SLC1A4 TFRC TMEM174 CYP4F11 FAT3 PTGR1 PPIF RET SLCO4C1 AKR1B1 TRIM16L RPL22L1 PTPRD EMR3 UGT1A7 UGT1A1 UGT1A4 UGT1A8 UGT1A9 UGT1A6 UGT1A5 UGT1A10 UGT1A3 HIGD1B LOC100131496 ATPAF1 ASF1A CDKN2B DEFB119 EIF2S2 AKR1B10 AKR1B15 CPN1 TERT PANX2 GOT1L1 SPACA1 EIF1AX RAB42 FASLG PPAT SLC6A6 LOC401913 CAMKK1 RHBDL3 AMBP CXCR7
CORDENONSI_YAP_CONSERVED_SIGNATURE http://www.broadinstitute.org/gsea/msigdb/cards/CORDENONSI_YAP_CONSERVED_SIGNATURE AMOTL2 ANKRD1 AXL BICC1 BIRC5 CDC20 CDKN2C CENPF COL4A3 CRIM1 CTGF CYR61 DAB2 DDAH1 ASAP1 DLC1 DUSP1 DUT ECT2 EMP2 ETV5 FGF2 FLNA FSCN1 FSTL1 GADD45B GAS6 GGH GLS HEXB HMMR AGFG2 ITGB2 ITGB5 LHFP MARCKS MDFIC NDRG1 PDLIM2 PHGDH PMP22 SCHIP1 SDPR SERPINE1 SGK1 SH2D4A SHCBP1 SLIT2 STMN1 TGFB2 TGM2 THBS1 TK1 TNNT2 TNS1 TOP2A TSPAN3
JAK2_DN.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/JAK2_DN.V1_DN TXLNG2P ANP32A-IT1 LONRF1 NEAT1 LOC51336 KIAA0754 LRRC37A2 PLGLA C21orf96 FLJ13769 MLL RFX3 CSAD C15orf5 DKFZp547G183 FLJ21272 NSMCE2 DAPP1 KIAA0485 RUFY2 GTF2H2D GOLGA8B ALDH8A1 NOL12 LOC202181 MBTD1 TMEM212 EEF1G GOLGA8A FLCN OXNAD1 MGC12488 REPS1 KIAA1731 VEZT DBF4B FLJ10246 MYBL1 PHC3 N4BP2L2-IT1 CTTNBP2NL DCAF13 C9orf38 AGSK1 LRRC37A LOC389634 61E3.4 DGKE SCAF4 GABBR1 CEP152 MTRF1L ANKRD36B DYM ASAP1-IT1 LOC643328 HCG18 C4orf29 KIF13A LOC155060 SEC31B LOC647357 ALS2CR8 KIAA0492 PAPD4 POLR2J4 DPY19L2P2 TLE4 SCG5 EXOC4 CEP41 STAG3L1 LINC00115 ZNF551 EREG DOCK5 TNRC18 SNHG3 ZNF280D HSPC047 DBH GRIK1 PGAP1 GPR1 LOC641807 SUZ12P AD7C-NTP CCNL1 TAF9B CMC1 GRM3 HOXA7 OXTR LOC92249 NAALAD2 FAN1 ZBTB6 PEX3 GABRE MRPL20 EMID2 SLC25A16 ZBTB44 SLC27A3 CAPRIN2 TCL1B ZNF160 DSCAM KIRREL ZNF721 RAX ADAMTSL4 MYO15B TRIM36 MTMR11 TRIM52 FBXO22 SLC4A5 PVT1 SIGLEC15 NSUN6 ATP8B1 CDH3 FBXW12 MAGIX FKBP11 LINC00312 MPDZ PRO1848 C9orf5 CDRT4 MGAT5 ZNF529 EPM2AIP1 UCP1 HEATR8 SRA1 AMT KIAA1659 SLC35E1 PCDHB13 SOCS7 VPS53 TMEM163 HERC2P3 NOTCH2NL CEP97 SGCE SLC15A2 ATM LINC00328 C8orf44 GUSBP1 ZNF44 ECM2 DMTF1 AGXT2L1 IKZF2 ZNF221 TDRD12 HYMAI ITGBL1 DLL3 NEUROD2 KIAA0506 C14orf113 SNRPN HIBADH ZNF550 DIP2A SPIB ERO1LB PNISR
JAK2_DN.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/JAK2_DN.V1_UP ZNF236 LOC100288903 KRT23 GZMH HOXD12 KLF13 FOXE3 PCDHB12 ABCB4 GPR15 LBX1 PTPRO SPRR2B CSN1S1 GRM5 SNCB TLX1 FGG CCIN FN3K PLSCR2 TGM1 ANXA2P3 SOX14 PAGE1 IMPG2 GPR52 MYO1A ATP8B3 HIST1H1D WNT1 CACNB4 TYMP RAB17 MATN4 SERPINB4 C9 MEOX1 PSG2 RBP3 FLT3LG LARGE MYH13 GH1 ZNF821 C8A DOT1L KITLG EGR4 TAF7L L1TD1 PTTG2 PTN PIPOX AGTR2 CXCR2 NELL2 ZFHX4 SMAD5-AS1 FOXD1 CLCNKB METRN CIDEA GPR37L1 HPR GRID2 SIDT1 WNT3 CRCT1 RBP4 TSPYL5 WFDC8 CSTA KCNIP4 HIST1H2BB LILRB5 CYP1B1 GRM4 PDE10A BMP2 LOC51190 ANXA2P1 PDZRN4 CBX8 ALPL C13orf44 SLC8A1 SPAG11A VOPP1 TNFRSF10C PHF14 LRRC6 FABP1 SPRR1A UTF1 CRYBA2 IL24 KIR2DS2 ZSCAN2 BHLHB9 LOC440895 OR51E2 CCND1 ILVBL HHCM SOX17 XCL2 CLDN7 SLC28A1 CHST4 HCRTR1 PCDHA9 KRTAP5-9 CNKSR2 OR1A1 CCL21 EDDM3A NAV2 SHH FRMPD1 DGKQ DUOX1 COL6A3 ADCYAP1R1 KRT85 FKSG2 CDKL2 GJB3 GALK1 SLC22A17 HSPA12A LAMA1 FKBP6 CDH5 EPPK1 C7orf58 HOXD1 SPN DLGAP1 LRIG1 CDH11 DMD PRLH SUV39H2 RALYL DMP1 IL17A MAGEA8 NACA2 BAI1 RANGAP1 CSPG4 TNP2 NPHS2 JAM2 ASGR1 EPHA3 GRTP1 CD8B COL4A6 MC5R FAM205B FGF20 ZEB1 ACTA2 C9orf114 CCR2 CYP2B7P1 SERPINB3 TUBA8 ASGR2 SEMA5A ESRRG FBXO4 HRH3 NPC1L1 INA ATRNL1 AKAP6 PCDHGA9 GFPT2 C6orf145 PRDM12 NEK11 RBPJL AFF3 KISS1 NDST3
KRAS.300_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.300_UP.V1_DN KRT13 S100A7 KRT4 KRT16 TGM1 CDH16 CXCR7 NOS1 EPHX2 IFI44L KRT38 IGF2-AS LY6D SPRR1B SLC6A14 KIF25 SERPINB13 SPRR3 DXS542 MX2 GPR77 THRB RRAD SOX11 PTPRCAP PYHIN1 PPFIA3 NTF3 HTR1B LOC440895 TRPM2 SLC6A3 ATP6V1B1 TUBAL3 SDS ABCB1 PCDHB1 PLBD1 EPHB6 CRYGD TAS2R4 OLFML2A HYAL4 CCR8 CGREF1 SCGB1A1 PSORS1C1 GADD45G NCR3 GRM2 HAAO DFNB31 NR0B2 AKR1B10 TNFSF10 CLDN16 DTNB MYL9 BRDT UGT2B17 CAMK1D TTLL1 TREM2 LFNG PLEKHH3 MAGIX CACNA1I HTR1D NPC1L1 CBL CSDC2 TBC1D29 COBL PDE6B GBP1 IFNA17 RUNDC3B KRT1 CTSW TMEM8B CIITA EDAR LGALS7 BST2 RASAL1 FGFR3 DPYS SIDT1 GKN1 CRABP2 MAP2K6 DPT SLC30A4 DSG3 KCNMB2 KIAA1660 MXD3 CHRM2 CA5B SYNPO DTX2 PROC TNNI3 NKX6-1 KCNE1 SLC3A1 APOB EDIL3 MTSS1L VILL MAML3 MXRA8 AMBN TAGLN TM4SF4 LOC390998 PODNL1 YBX2 COLEC10 ACTG2 PROP1 ZNF750 DENND1C APBB3 RYR2 TEX15 P2RX1 CEACAM5 SLC9A7 SPTBN2 FOXI1 OAS1 RTP4 MX1 PDE11A PCYT1B TNFRSF13B CD40LG FMO6P HOXB8 KCNQ3 HSPB8 MUC5AC
KRAS.300_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.300_UP.V1_UP IL13RA2 A2M SCG5 IL1RL1 ITGA2 C11orf41 FGF9 G0S2 CALB1 HSD11B1 NRCAM DOCK4 SNAP91 STC1 FAM155B DYNC1I1 ST3GAL6 CDR1 SNAP25 ANGPTL4 ETV1 NTM MMP11 GLRX RBP4 ITGB2 ETV5 PEG3 RELN CFHR2 LMO3 HEY1 TERT LILRA6 DHRS9 CD1A ADAM8 SIGLEC15 GLDC KIF5C PPBP SCG3 HPN PCDH8 HTR7 CHGB CXCL5 FABP3 CGA TAPT1 SLC25A31 KCNK10 RNASE1 SYT1 PDE2A NOL4 ZNF528 LOC401034 NPY6R C7orf63 SMPX CXCL3 TFDP3 EVI2A KCNK7 ACCN4 DNAJA4 BEX1 USH1C ARHGAP24 GPR4 ATP1A2 KIF5A DUSP6 RDH5 DCBLD2 ADAM19 ETV4 CTNNA2 GBA3 GRIN2A LOC653127 NAV3 MAPK10 CHGA NME5 APOD ANK3 RTN1 SCN1B CSF3 SPRY2 SEMA3A CEL MCF2 ANO1 KCNH2 CEACAM3 PCP4 NAP1L2 ANPEP MMP1 FNDC8 RCAN2 DNM3 SLC6A15 SORL1 LOC147343 DEFB4A ITGBL1 LOC202181 MAP4K1 GABRA1 DDX6 LRCH1 CDK5R1 APOBEC3G CRISP1 ERC2 RRAGD EFCAB6 CLUL1 RETN GABRA3 ZP4 SCN2A TRIB2 SLCO5A1 GPR19 EMID2 ASTN1 TOX3 DBH ATXN3L HIST1H2BO WNT7A HAS2 MKRN3 TRIM36 SPP1 TFPI OR2B6 PTX3 CEACAM1 LOC339524 PRG3
KRAS.50_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.50_UP.V1_DN KRT13 S100A7 KRT4 KRT16 TGM1 CDH16 CXCR7 NOS1 EPHX2 IFI44L KRT38 IGF2-AS LY6D SPRR1B SLC6A14 KIF25 SERPINB13 SPRR3 DXS542 MX2 GPR77 THRB RRAD SOX11 PTPRCAP PYHIN1 PPFIA3 NTF3 HTR1B LOC440895 TRPM2 SLC6A3 ATP6V1B1 TUBAL3 SDS ABCB1 PCDHB1 PLBD1 EPHB6 CRYGD TAS2R4 OLFML2A HYAL4 CCR8 CGREF1 SCGB1A1 PSORS1C1 GADD45G NCR3
KRAS.50_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.50_UP.V1_UP IL13RA2 A2M SCG5 IL1RL1 ITGA2 C11orf41 FGF9 G0S2 CALB1 HSD11B1 NRCAM DOCK4 SNAP91 STC1 FAM155B DYNC1I1 ST3GAL6 CDR1 SNAP25 ANGPTL4 ETV1 NTM MMP11 GLRX RBP4 ITGB2 ETV5 PEG3 RELN CFHR2 LMO3 HEY1 TERT LILRA6 DHRS9 CD1A ADAM8 SIGLEC15 GLDC KIF5C PPBP SCG3 HPN PCDH8 HTR7 CHGB CXCL5 FABP3
KRAS.600_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.600_UP.V1_DN KRT13 S100A7 KRT4 KRT16 TGM1 CDH16 CXCR7 NOS1 EPHX2 IFI44L KRT38 IGF2-AS LY6D SPRR1B SLC6A14 KIF25 SERPINB13 SPRR3 DXS542 MX2 GPR77 THRB RRAD SOX11 PTPRCAP PYHIN1 PPFIA3 NTF3 HTR1B LOC440895 TRPM2 SLC6A3 ATP6V1B1 TUBAL3 SDS ABCB1 PCDHB1 PLBD1 EPHB6 CRYGD TAS2R4 OLFML2A HYAL4 CCR8 CGREF1 SCGB1A1 PSORS1C1 GADD45G NCR3 GRM2 HAAO DFNB31 NR0B2 AKR1B10 TNFSF10 CLDN16 DTNB MYL9 BRDT UGT2B17 CAMK1D TTLL1 TREM2 LFNG PLEKHH3 MAGIX CACNA1I HTR1D NPC1L1 CBL CSDC2 TBC1D29 COBL PDE6B GBP1 IFNA17 RUNDC3B KRT1 CTSW TMEM8B CIITA EDAR LGALS7 BST2 RASAL1 FGFR3 DPYS SIDT1 GKN1 CRABP2 MAP2K6 DPT SLC30A4 DSG3 KCNMB2 KIAA1660 MXD3 CHRM2 CA5B SYNPO DTX2 PROC TNNI3 NKX6-1 KCNE1 SLC3A1 APOB EDIL3 MTSS1L VILL MAML3 MXRA8 AMBN TAGLN TM4SF4 LOC390998 PODNL1 YBX2 COLEC10 ACTG2 PROP1 ZNF750 DENND1C APBB3 RYR2 TEX15 P2RX1 CEACAM5 SLC9A7 SPTBN2 FOXI1 OAS1 RTP4 MX1 PDE11A PCYT1B TNFRSF13B CD40LG FMO6P HOXB8 KCNQ3 HSPB8 MUC5AC PRTN3 ABCG4 CYP2C18 KRT31 IFNA5 HIST1H3A IFNA16 KLK7 CKM FGGY AQP6 TRH SPRR1A HLA-DOA UGT2A3 CNTFR KRT17 FCGBP LOC100288903 CXCL14 CLDN8 ARHGAP28 SCGN CYP2C19 C22orf31 DLX6 IL19 DSG1 XAF1 BLNK CADM4 BCL11B GPR173 EDN2 SIT1 CLIC3 C8orf59 PCDHGB6 GNRH2 CCDC33 MAPRE3 FLJ11827 SLAMF1 TGFB2 DDX51 NEU3 CD36 FGF4 MYOM2 LGALS9 ADRA2B CSPG4 BBC3 NRXN3 SERPING1 HOXC8 ZBP1 C8A PTPRH LRRC31 KCNMB1 KLF8 PRRG4 FOXRED2 IGLV2-14 LOC644872 LOC57399 COL2A1 PIP5K1C FLJ20712 EDN1 HRASLS HRH3 THNSL2 CALML5 ZBTB16 EPHB3 CD300A IL5 KLK12 FRAS1 SCN7A THBD KIAA0087 SCN10A YOD1 WNT16 PRODH LYPD3 NINJ1 GP2 PIK3C2B CNGB1 C1QL1 C17orf88 CTAG2 SPATA6 SLC22A11 MLANA SPAG11B CHRNG KLF3 ADAMTS9 PGLYRP1 VGLL3 TRIM48 VAV3 ZNF154 CALML3 NAALADL1 CXorf48 SMPDL3B NOX3 MCHR1 CCDC102B PNMT ARHGEF38 NR1I3 ABCB11 NYNRIN ART1 CLCA2 ANKRD1 CALCB SLC5A2 IMPA2 ENPP1 RAMP3 CD207 CATSPERB CD248 GPR52 FETUB CNR2 MATN2 MAST3 APOL3 SLC29A3 DBF4B CST4 ATP2A3 MTNR1A PTPRU DLK2 FOLR2 IVL
KRAS.600_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.600_UP.V1_UP IL13RA2 A2M SCG5 IL1RL1 ITGA2 C11orf41 FGF9 G0S2 CALB1 HSD11B1 NRCAM DOCK4 SNAP91 STC1 FAM155B DYNC1I1 ST3GAL6 CDR1 SNAP25 ANGPTL4 ETV1 NTM MMP11 GLRX RBP4 ITGB2 ETV5 PEG3 RELN CFHR2 LMO3 HEY1 TERT LILRA6 DHRS9 CD1A ADAM8 SIGLEC15 GLDC KIF5C PPBP SCG3 HPN PCDH8 HTR7 CHGB CXCL5 FABP3 CGA TAPT1 SLC25A31 KCNK10 RNASE1 SYT1 PDE2A NOL4 ZNF528 LOC401034 NPY6R C7orf63 SMPX CXCL3 TFDP3 EVI2A KCNK7 ACCN4 DNAJA4 BEX1 USH1C ARHGAP24 GPR4 ATP1A2 KIF5A DUSP6 RDH5 DCBLD2 ADAM19 ETV4 CTNNA2 GBA3 GRIN2A LOC653127 NAV3 MAPK10 CHGA NME5 APOD ANK3 RTN1 SCN1B CSF3 SPRY2 SEMA3A CEL MCF2 ANO1 KCNH2 CEACAM3 PCP4 NAP1L2 ANPEP MMP1 FNDC8 RCAN2 DNM3 SLC6A15 SORL1 LOC147343 DEFB4A ITGBL1 LOC202181 MAP4K1 GABRA1 DDX6 LRCH1 CDK5R1 APOBEC3G CRISP1 ERC2 RRAGD EFCAB6 CLUL1 RETN GABRA3 ZP4 SCN2A TRIB2 SLCO5A1 GPR19 EMID2 ASTN1 TOX3 DBH ATXN3L HIST1H2BO WNT7A HAS2 MKRN3 TRIM36 SPP1 TFPI OR2B6 PTX3 CEACAM1 LOC339524 PRG3 STX1A CXCR4 GPR37 LOC650293 TAAR5 ZEB1 GPR124 MMP9 CPA2 IL36A ETV2 ANKRD34C IDI2-AS1 ST18 KCNJ8 PRL ACOX2 MMP10 AURKC VEGFC TGM2 TNFSF15 CSN2 TAGLN3 PNMA2 GFI1 FEZF2 PRDM14 PTGS2 IL1R2 KCNAB3 ZNF529 DLGAP2 HBEGF DNMBP NTRK3 CDHR2 CD80 PIWIL1 CDK2AP2P3 EMP1 HS3ST3B1 KCNK3 TBX3 TPH1 ESM1 ATP4A LAPTM5 CHRNA3 IFNA8 IGF2 KCNC1 SH2D2A ZDHHC11 DEFA5 GNG11 PMS2P4 TLR8 CTNND2 MAGEA11 ARL4C LDB3 SPINK1 MLXIPL CEND1 SLCO4A1 PLAT KIT LINC00341 CMKLR1 MYF6 OR2C1 PFKFB1 TMEM158 GALR2 TRIM2 PRO0478 CSF2RA MGC4771 BMP7 PLAU MMD INHBA CYP27B1 GFAP KIAA0226L NRP1 KCNA5 GRM1 MTMR8 SATB1 MAGEH1 ITPKA ALPI MMP17 DIRAS2 SLIT1 AMBP LGALS14 LIMCH1 MSMB LPPR1 LAG3 FAM174B MOBP PRG1 HIST1H2BB FLT4 PELI2 NR4A3 MGAT4A TLR4 TRIM45 KCNJ13 PCDH9 C10orf81 GPR18 DUSP4 PLA2G4C TMEM156 LOC651803 EN2 TSPY1 KRT8P12 SOX9 PLA2G3 EXOC6B CCNJL C1QTNF1 NMNAT2 CCR6 REEP2 FMNL2 FLJ13310 ALDH8A1 LPXN ADCYAP1R1 BUD31 UGT8 CLSTN2 FOXG1
KRAS.600.LUNG.BREAST_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.600.LUNG.BREAST_UP.V1_DN LY6D KRT13 MAST3 MEGF8 ATP6V1B1 S100A7 TM4SF4 EPHX2 CALML5 SYNDIG1 PDE6B IVL SPTBN2 P2RX1 TRIM48 CDH12 AKR1B10 TNNI3 GLYAT APOB SERPINB13 KRT4 MYL9 NOX5 UPK3B SLC3A1 CCDC132 RAMP3 KRT16 DTNB METTL7A LOC440895 GADD45G OLFML2A MXRA8 CD248 FGFR3 TGM1 MAP2K6 YPEL1 HTR1B SOX11 CXCL14 ALOX12B TSHB NCR3 TTLL1 PIK3C2B TRPM2 MMP28 PDE3A DEFB1 AMBN ATHL1 INPP5D CALML3 SIDT1 SCN7A VAV3 MXD3 PAQR6 RAG1 NOS1 CXCR7 KRT38 TBR1 AKAP6 DTX2 PARP3 GLS2 CLCA2 ART1 CD36 COL2A1 DPT ANKRD1 PCDHB1 TAS2R4 FRAS1 IFI44L VAX2 COL5A2 PBX1 HCN2 ADAMTS20 PROC IL5RA LOC642671 LOC100288903 ADD2 PVALB HIST1H3A KIAA1660 SPAG11A LGALS7 RTP4 KCNMB1 NTF3 GPR77 IGF2-AS SOBP CLDN8 RBM17 TRIM9 CYP21A2 GAMT KIF25 FLT1 FMO6P IFNA16 MTHFR EMR1 EPB41L4A LGALS9 IGFBP2 THNSL2 PLBD1 NSUN6 SERPINA10 TNFSF10 RUNDC3B CD6 RPL13P5 ERAP2 COBL HHLA1 RYR1 GDNF ALDH5A1 HTR1E NYNRIN CRABP2 BDKRB1 PTPRU CALCB SLC6A9 C6orf10 HRK SCARF1 SLC12A3 CACNA1I RARRES2 CCDC121 GABRA4 CDH16 BRDT DENND1C MYH7 PPYR1 PLXND1 FGF1 BBOX1 KCNMB2 APC2 GP1BB SLC25A23 KRT1 PTGFR PRDM12 C19orf73 GPRC5B NINJ1 MMP27 CPB1 EMID1 NAALADL1 FAM189A2 IL12RB2 PTENP1 GP6 IQCG TBKBP1 CRYAB PROM1 NEIL1 C6orf64 GALNT8 CIITA MAML3 PCSK2 ELMO1 DPYS FBXO24 TYRP1 ZNF343 CLDN16 UGT2A3 CXCR2 DFNB31 DGCR6L KIAA1456 SLC30A3 IFT140 COL19A1 SCN10A STAG3L1 S100A12 CNTLN C17orf80 RIMS1 SERPINB3 HEPH KLF8 SELENBP1 GBP1 PTPRJ PPFIA3 FGGY CD207 MAP3K1 IL18R1 SCGB1A1 GP1BA TBC1D29 IL12A POU4F2 DAAM2 PAX2 C11orf80 ENTPD5 DYRK1B SLC6A3 APOL3 CCDC102B PVRL1 IL5 LILRP2 PLAC8 SERPING1 CA5B ZNF750 ZNF391 PPFIA2 ADORA3 NEUROD1 THAP9 KCNB1 CRABP1 ZNF702P C22orf31 BTN3A2 THBS3 AAAS HBZ SDS ACCN2 MYOM2 SELE NLGN4Y COL5A3 CREB3L1 CACNA2D3 ALG1L2 IL22 RARRES3 YBX2 PYHIN1 IMPA2 KCNIP2 ZSCAN2 HOXB3 DLX6 FSCN2 CKM PRODH2 TRIM58 TMEM8B KRT20 CD5 DENND2D PSORS1C1 LOC100507605 CYP26B1 GAS1 CHRM5 DUSP21 MRPL41 GRIA1 KLRK1 EPHX3 GBP2 TEX15 KLK12 SH3GL3 LECT2 FGF21 SNN MYOM1 HTR1D
KRAS.600.LUNG.BREAST_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.600.LUNG.BREAST_UP.V1_UP IL1RL1 IL13RA2 HSD11B1 PPBP SCG5 CXCL5 MMP10 MMP1 CSF3 NAV3 TAGLN3 KRT34 ESM1 PDE2A IL37 SMPX RBP4 HSD17B2 ZP4 SPINK1 IL1R2 DHRS9 ADAM8 G0S2 INHBA RETN AMELY CXCL2 HBEGF BMP6 CD1A GFI1 KCNK15 HPN PRDM1 ETS1 FNDC8 CXCL3 GLRX TERT FAM155B RELN STC1 CRCT1 LIF NDOR1 IFNA8 SNAP25 TNFSF15 ITGA2 DKFZp566H0824 CDSN IL8 GPR4 MMP9 KCNC2 NRL KIF5A GULP1 POLM CLSTN2 FCRL2 C9orf38 RNASE1 MYH2 CXCL1 CTNNA2 ISG20 CALB1 RPS4Y1 NR1H4 SPRY2 IL23A CCL20 LOC401034 LAT2 DNAH9 KCNJ14 DOCK4 ADAM19 ITPKA OR2B6 PRSS3 ANGPTL4 OSBP2 LDB3 ST3GAL6 PTPRR GBA3 SLCO4A1 HOXD11 CSF2 TNFAIP3 CD247 KCNC1 CHRNA2 IGHV3-48 TBX3 KIF5C SLC25A31 NELL2 SLCO5A1 TRAF1 TAAR5 GABRA3 CCR6 C11orf41 CLPS SNAP91 TTC22 OSGIN1 ADAMTS6 GRP CD37 NPPB AKT2 HAS2 CEACAM3 A2M C1orf114 IGFBP3 PRY RMST TFDP3 RBMXL2 PDCD1LG2 PRL GYPC LILRA6 FAM174B MGLL MKRN3 TSPAN1 TSPY1 SEMA3B BIRC3 CATR1 NTM CMKLR1 PTGS2 ID2 SHOX ATG10 ZNF639 SH2D2A ATXN3L RDH5 ALPP KRT33B AKAP12 LYL1 PLAC4 PPP1R14D DYNC1I1 SIGLEC15 LY96 KCNAB3 ETV4 SPANXC IL1B NGF PRG3 TMEM176B MB L1TD1 DCAF13 MGC4771 ZNRF4 FBXO4 RBM GPR124 PPP1R15A TNNT2 PIWIL1 TIGD6 PRRX1 COL9A3 FBP1 SCGB1D1 KCNK7 IL36A NTRK1 KCNA5 DENND5B PLAUR HOXD1 DCBLD2 MMP20 KIAA0754 SLC5A5 ANO1 EVI2A USH2A MMP15 TFPI MAPK10 WNT7A CELA2B OGDHL DDIT3 ARG1 TMEM158 ST6GALNAC5 UGT2B28 TMEM156 HDAC9 LAG3 PLA2G3 SPIB C7orf63 CFHR2 LAMC3 LPL C1orf68 SAMD14 WDR25 FLT4 GPRC5D SEMA3A LHB MYOC TRIM46 GRIN2A STX1A SSTR5 CLEC4A CCL22 CCT8L2 PTTG2 TOX3 ARHGAP24 FAM120C CHST2 SOX17 BMP2 SFRP5 SYP LOC646649 FOXL2 FUT5 CCR10 NACC1 HIC1 MAGEA6 DEFB4A NPHS1 MYF6 TONSL BRSK2 MTMR8 ZNF671 PTGIS SPHK1 PRDM14 PLXNB3 KIF24 SLIT2 TAPT1 HAO2 ANO2 ATP4A PRSS2 SOX10 NCAM1 IL24 GNG11 KCNH2 HSD3B2 MSMB TRIM45 CACNG1 WNT1 CYP4F8 CECR1 MAGEA11 MIA CLDN5 PLVAP NMUR1 NRCAM CD1B GFAP FRMD1 LOC79999 CD160 S100A5 IMPG1 LGALS14
KRAS.BREAST_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.BREAST_UP.V1_DN PAQR6 ABCB1 NDNF ATP6V1B1 POU3F2 MAST3 NOS1 TM4SF4 DTNB P2RX1 ENTPD5 EPHX2 DTX2 ALG1L2 SCN7A CCDC121 HOXB5 MYOM2 PDE3A CLSTN3 NTF3 PVRL1 PTENP1 RPL13P5 LOC341651 GADD45G KDM4D RUNDC3B TRIM9 CCDC57 ATHL1 ZNF37BP TNNI3 ART1 SYNDIG1 DPYS SDS UGT2A3 LATS1 YPEL1 APOB EGR4 NFATC4 ADAMTS5 EDIL3 NPR1 GRIP2 P2RX7 GP1BB KCNA3 TSPAN12 ADAMTS20 C22orf31 CRH APOL3 ALOX12B HCN2 C7orf43 C17orf59 NCR3 ASPHD1 GLS2 HHLA1 FRAS1 SPTBN2 IL18R1 KRT38 PTGFR SERPINA10 CLDN8 C6orf10 KIF25 RAMP3 WT1-AS NAALADL1 EGFL7 ACCN2 SOBP KLF8 MUC13 SERPING1 PROP1 IFNA16 CDH12 PLBD1 PCDHB1 MEGF8 MYL9 HPR FGGY MTHFR PI15 EXOSC1 TEX15 CRABP1 CDK18 SLC9A7 DENND2D NOX5 KCNJ3 SV2B ANKRD1 CACNA1A FGFR3 CA5B SELENBP1 CALCB TTYH1 CSRP3 SMPDL3B HIST1H4L SLC30A3 RBM17 GJA10 DPT SIDT1 DPEP2 TSHB CAMK1 LOC440925 MYH7 KCNQ3 DUX1 FGR PBX1 TLR6 CYP21A2 FMO6P HBZ XYLB SLC8A1 CRYGD GP6 PF4V1 EEF1DP5 GABRA6 POLL GJA4 PDE6B MAML3 LAIR1 PPM1E COL5A2 TFF2 ELMO1
KRAS.BREAST_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.BREAST_UP.V1_UP IL1RL1 IGFBP3 DHRS9 ZP4 PPBP CRCT1 MMP10 IL1R2 NR1H4 IL37 SPINK1 ESM1 SCG5 CLSTN2 TAGLN3 IL1RAPL1 CDSN HSD17B2 DNAJA4 KCNK15 HSD11B1 KIF5A HAS2 PDE2A TAAR5 PRDM1 BMP6 NFE2 ATP12A KRT34 SAMD14 AMELY CLPS NPAS1 PRRX1 C3orf51 MMP9 KCNC2 KRT33B COL9A3 KCNA10 ALPP USH2A GULP1 SMPX A2M MYCN SYP LIF KLK6 SOX17 C9orf38 CSF2 GSG1 GPR37L1 KIAA0754 CCL16 KIF24 ETV2 KCNJ14 IL17RB HDLBP MGLL PSCA HIST1H2AI KCNA2 GFI1 LOC440334 EFNA5 PCDHGA11 KLK12 TMPRSS4 FMO2 ACPP CMA1 GPR144 CMKLR1 CXCL3 GLRX CALB1 OR2C1 GABRA3 LOC650594 TRAF1 BAIAP3 DEFB4A LILRA6 KCNK3 SPRR2B FCRL2 CCRL1 IGF2 GJA8 LOC652159 TLR8 MAPK4 KCNAB3 CDK2AP2P3 IL2RG CASS4 CEACAM1 SPRY2 CEACAM3 TFPI IL1B OCA2 CYB5R2 PDE3B PPP1R15A AKAP12 LYL1 SPON2 KCNJ16 RBMY2FP PRB4 BIRC3 LOC646649 COL9A1 ANKRD36BP2 OSGIN1 FAM30A S100A5 FAM155B STX1A NRL WDR96 SNAP25 SPACA1 CXCL2 NDUFA4L2 IL13RA2 RMST STC1 TAPT1 ANO2 TNFAIP3 WNT16 SCEL PROL1 MKRN3 TMEM176A CCL22 ADAMDEC1 NPPB TERT CTNNA2
KRAS.KIDNEY_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.KIDNEY_UP.V1_DN TREM2 NPPB RSAD2 SLC5A5 LFNG NES KRT17 IFI44L SGK2 CXCL10 IL23A AADAC THRB PROP1 MX1 KIF21B PTPRCAP OR7A10 ETS1 HIST1H2AI TCP10 OAS1 MSC IFNA17 APBB3 PRG2 CD14 GRM8 LOC399904 EDN2 IL1RL2 CBL GRM4 THBD HHIPL2 PHLDA3 AGRP VILL PDCD1 FOXA1 LIPE EGFL7 IL26 NGF C8orf59 LMAN1L HINFP CXCL11 ACE NR1I3 FOLR2 ITIH5 KLK1 RYR2 CCL20 LOC650488 C3orf36 KRT2 ZDHHC8P1 INSL4 SPAG11B STX11 ACTC1 BAAT LILRB4 IGKV3D-15 LRRC31 PRSS21 MX2 ODZ2 TCF21 DXS542 DSG3 SERHL2 HYAL4 GRM2 PAGE1 KLHDC8A KLF3 CST5 CAPN9 KCND1 PTGER2 TTLL2 EFHD1 PGP EREG CHRM2 DEPDC5 INSL5 KCNF1 SIM1 ATP1B4 FLJ20712 SLC9A3 MGC2889 GPR35 CLEC3B C19orf26 CETP LRRC48 KCNN1 SPATA6 CCL27 MAGEA10 EPHA5 ABCB11 EPS8L3 BMP4 IL6 MDFI LOC390998 IFI30 ASPN SLC6A20 CACNA1S ABCA3 ADAMTSL2 BRDT TACR2 HSD17B2 LILRA4 CHRNA9 HRG CNN1 TYROBP ECEL1 CSF1R SRD5A3 B3GALT5 CARD9 GATA4 SEMA5A CHRNG NPC1L1 SEC31B FCHO1 DDX51 NPFFR1 SRC RASGRF1 CATR1
KRAS.KIDNEY_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.KIDNEY_UP.V1_UP FGF9 CDR1 RTN1 NRCAM PCP4 GATM ETV1 SNAP91 SEPP1 SCG3 AK5 SORL1 METTL7A ATP1A2 NEFL PEG3 CDK5R1 ANK3 PLSCR4 ITGBL1 PELI2 LMO3 ZNF536 SV2B PLP1 PMP2 CRTAM NDN A2M EMP1 CALB1 TRIM9 SPARCL1 GPM6A XK DYNC1I1 PLCB1 GABRA1 ADCY1 CHGB PLGLA CRYAB HPCAL4 CAB39L GABRB1 ERC2 PCDH9 TCEAL2 GPR37 SIGLEC15 GRM5 CHGA CA2 HMP19 NEBL TRIM2 TSPAN7 ST3GAL6 ANK2 KIF5C SLC6A15 HEY1 GRIA2 TRIL SYT1 SFRP1 TMOD1 SATB1 SNAP25 CCND2 SLC1A3 RCAN2 NUDT11 GCGR MAP7 SCN1B FAM153B PNMA2 RIT2 SMR3A WSCD1 DNM3 GPNMB NRN1 DDX6 GABRR2 SLC12A5 SOBP D4S234E AQP4 PLCL1 MPZL2 MEF2C ARPP21 NME5 NAP1L2 ALDH1A1 SORBS1 LIMCH1 ESRRG DUSP6 RAPGEF4 FZD3 RELN NRXN1 TUBB4A TRIB2 GRIK2 KCNA5 NMNAT2 GPR19 PECAM1 CPE KIT CRYM C7orf63 OCLM GABRA5 LOC147343 SLC12A3 SCG5 RNLS GHRH SCN2A MMP27 NOL4 MAFB EPB41L3 TMEM100 ASPA DLGAP2 MAGEH1 COPG2 SLC6A1 GLDC GAP43 SERPINI1 GPRC5B VIPR2 LOC401034 GAD1 WIF1 CPEB3 CP KCNJ8
KRAS.LUNG_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.LUNG_UP.V1_DN LY6D S100A7 IVL KRT4 KLK12 KRT16 CDH16 CALML5 SPRR3 LGALS7 KRT13 CXCL14 COBL SERPINB13 SERPINB3 AKR1B10 MAP2K6 S100A12 TGM1 KLK7 ACPP POSTN BBOX1 CRYAB SLC6A14 MAFB CD248 INPP5D RTP4 MEGF8 LOC653326 PIK3C2B SH3BP1 HTR1B KRT1 BBC3 ZNF750 PSORS1C1 DEFB1 PRODH HAAO RYR1 COL2A1 FCGR3B EMID1 OLFML2A WNT16 LOC57399 NYNRIN CLCA4 RAB40AL RHCG PTPRU TRIM48 FAM164C AKAP4 KLK8 GLYAT NGFR APOBEC3A SRD5A3 FMO2 CDKN1C LYPD3 RDH16 SCARF1 GALNT8 KLK11 ALDH3B2 PLA2G10 PDE6B CRABP2 CYP26B1 SERPINB4 IGFBP2 VPREB1 CCR2 KRT15 VAV3 C6orf64 PPFIBP2 AKAP6 LOC440895 CALML3 SLC3A1 IHH COL19A1 MXRA8 CYP2C18 GAS1 GABRB1 SH3GL3 C11orf80 TNFSF10 HEY2 TRHDE HTR1D CYP4B1 SGCD SLC6A9 SOX30 METTL7A CD22 C1orf222 UPK3B CBL ZNF862 CCDC132 TSC22D4 DHX58 SCN10A STAG3L1 ADD2 LOC100507605 MORC1 IL10RA CHRM5 PROC PSG7 ACHE PLCH2 CACNA1F EPHB3 ERG LMO1 OR3A3 MAP3K1 PROM1 THAP9 GPNMB TF GPR45 TRGV7 ADORA3 MC5R RAG1 SCRG1 PALM SLC39A2 CDH12 GDNF SCGB1A1 PPYR1 SPTBN2 ATAT1
KRAS.LUNG_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.LUNG_UP.V1_UP IL13RA2 CXCL5 MMP1 IL1RL1 HSD11B1 CSF3 NELL2 NAV3 NPHS1 MAGEA6 INHBA KIF5C CD247 CELA2B RBP4 G0S2 GBA3 OGDHL LRIG1 FBXO4 TSPAN1 HPN POLM FNDC8 B3GNTL1 SDCCAG8 IFNA8 FRMD1 ANGPTL4 SLC6A11 SLC18A1 TMEM176B DEFA5 ETS1 SCG5 RETN NTM TNNT2 PRKG2 ADAMTS3 C3AR1 FABP3 ST3GAL6 LOC100289255 ADAM8 CLSTN3 C17orf53 CECR1 AURKC SLCO5A1 CLEC4A LOC157627 FUT5 PTPRR LDB3 LOC401034 ZNF749 CD1A TTC22 GRIN2A EGFL7 CX3CR1 RELN TBX3 MT3 CCL20 TAS2R1 KIR2DL3 BTC CCT8L2 C7orf63 ANO1 SIGLEC15 ITGA2 HS3ST3A1 ATG10 HBEGF CYP2J2 C11orf41 NDOR1 CD80 CYTIP UGT1A10 TMEM158 SEMG2 ABCB1 IL8 SH2D2A CYP4F8 ZBTB48 ZNF639 IL23A IGSF1 JAK3 GRIP2 TEX13A NGF ADCYAP1R1 HOXD11 CD48 EVI2A SLC6A4 MYH2 SMPX RNASE1 KCNA5 PPP1R14D NKX2-5 SARM1 DCBLD2 GPR3 PDCD1LG2 ASGR2 ALLC WNT7A IKZF1 AKT2 MMP20 HTR7 SLC16A8 CRYAA BCL2A1 BANK1 PAX4 OR2B6 CG030 NES SLCO4A1 LAG3 ZNF821 DOCK2 PCDH17 NRP1 DOCK4 NDNF LILRB1 TSPY1 ZBTB44 LINC00472 RGS4 PRG3
KRAS.LUNG.BREAST_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.LUNG.BREAST_UP.V1_DN LY6D KRT13 MAST3 MEGF8 ATP6V1B1 S100A7 TM4SF4 EPHX2 CALML5 SYNDIG1 PDE6B IVL SPTBN2 P2RX1 TRIM48 CDH12 AKR1B10 TNNI3 GLYAT APOB SERPINB13 KRT4 MYL9 NOX5 UPK3B SLC3A1 CCDC132 RAMP3 KRT16 DTNB METTL7A LOC440895 GADD45G OLFML2A MXRA8 CD248 FGFR3 TGM1 MAP2K6 YPEL1 HTR1B SOX11 CXCL14 ALOX12B TSHB NCR3 TTLL1 PIK3C2B TRPM2 MMP28 PDE3A DEFB1 AMBN ATHL1 INPP5D CALML3 SIDT1 SCN7A VAV3 MXD3 PAQR6 RAG1 NOS1 CXCR7 KRT38 TBR1 AKAP6 DTX2 PARP3 GLS2 CLCA2 ART1 CD36 COL2A1 DPT ANKRD1 PCDHB1 TAS2R4 FRAS1 IFI44L VAX2 COL5A2 PBX1 HCN2 ADAMTS20 PROC IL5RA LOC642671 LOC100288903 ADD2 PVALB HIST1H3A KIAA1660 SPAG11A LGALS7 RTP4 KCNMB1 NTF3 GPR77 IGF2-AS SOBP CLDN8 RBM17 TRIM9 CYP21A2 GAMT KIF25 FLT1 FMO6P IFNA16 MTHFR EMR1 EPB41L4A LGALS9 IGFBP2 THNSL2 PLBD1 NSUN6 SERPINA10 TNFSF10 RUNDC3B CD6 RPL13P5 ERAP2 COBL HHLA1 RYR1 GDNF ALDH5A1 HTR1E NYNRIN CRABP2 BDKRB1 PTPRU CALCB SLC6A9 C6orf10 HRK SCARF1 SLC12A3 CACNA1I RARRES2 CCDC121 GABRA4 CDH16
KRAS.LUNG.BREAST_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.LUNG.BREAST_UP.V1_UP IL1RL1 IL13RA2 HSD11B1 PPBP SCG5 CXCL5 MMP10 MMP1 CSF3 NAV3 TAGLN3 KRT34 ESM1 PDE2A IL37 SMPX RBP4 HSD17B2 ZP4 SPINK1 IL1R2 DHRS9 ADAM8 G0S2 INHBA RETN AMELY CXCL2 HBEGF BMP6 CD1A GFI1 KCNK15 HPN PRDM1 ETS1 FNDC8 CXCL3 GLRX TERT FAM155B RELN STC1 CRCT1 LIF NDOR1 IFNA8 SNAP25 TNFSF15 ITGA2 DKFZp566H0824 CDSN IL8 GPR4 MMP9 KCNC2 NRL KIF5A GULP1 POLM CLSTN2 FCRL2 C9orf38 RNASE1 MYH2 CXCL1 CTNNA2 ISG20 CALB1 RPS4Y1 NR1H4 SPRY2 IL23A CCL20 LOC401034 LAT2 DNAH9 KCNJ14 DOCK4 ADAM19 ITPKA OR2B6 PRSS3 ANGPTL4 OSBP2 LDB3 ST3GAL6 PTPRR GBA3 SLCO4A1 HOXD11 CSF2 TNFAIP3 CD247 KCNC1 CHRNA2 IGHV3-48 TBX3 KIF5C SLC25A31 NELL2 SLCO5A1 TRAF1 TAAR5 GABRA3 CCR6 C11orf41 CLPS SNAP91 TTC22 OSGIN1 ADAMTS6 GRP CD37 NPPB AKT2 HAS2 CEACAM3 A2M C1orf114 IGFBP3 PRY RMST TFDP3 RBMXL2 PDCD1LG2 PRL GYPC LILRA6 FAM174B MGLL MKRN3 TSPAN1 TSPY1 SEMA3B BIRC3 CATR1 NTM CMKLR1 PTGS2 ID2 SHOX ATG10 ZNF639 SH2D2A
KRAS.PROSTATE_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.PROSTATE_UP.V1_DN RRAD SPRR1A S100A7 SPRR3 SPRR1B KRT16 KRT4 IGFBP3 TGM1 ABCB1 COBL LUM CDH16 CNTFR S100A8 ARG1 KRT13 NEU3 TUBAL3 NCR3 TUBB4A FBXO40 MAFB DNAJC12 ZBTB16 IL19 IBSP KLF1 GCNT3 DZANK1 CTSE LCN2 EGF PI3 CCR10 KCNA2 CRYGD CXCR7 NOS1 RASGRP1 KLKB1 OPCML CD48 NPHS1 SOD3 NR0B2 MAGIX ITGB1BP2 OXT TTC21B IGLV2-14 FLRT1 SH2D3C PLCB1 PTGIS CAMK1D ITGB7 PRTN3 C5 GPRASP1 SLC30A4 CCDC134 AK5 YBX2 EDN1 ABCG4 ADAM23 NTF3 SLC19A3 ATP8B3 CADM4 SLC6A14 SLC4A8 GKN1 PLGLA KCNQ2 COLEC10 CLDN17 FOXD2 ACSS3 ARHGAP28 CRY2 MGC40069 PPP1R9A CGREF1 EPHB6 TFAP2B CD96 NDP TAGLN SLC26A10 HBA2 C1orf68 LHCGR CA5B HDLBP NPBWR2 DIRAS3 PTH1R SOX10 PF4V1 IDUA SERHL ZNF750 GNGT2 C22orf31 CFI SDS EPHX2 ARL17A ARPP21 MUC4 BEND5 MAOB JMJD5 RGS6 PCDHB13 GPNMB ENPP1 SSTR4 KCNJ14 KIAA1660 CWH43 VIL1 PTPRH MUC16 KIAA0087 HLA-DMB POU3F2 SMO SERPINB7 MLANA FOLH1B PRY MLYCD AATK REEP1 SCEL SERPINB2 TRH GRM2 ASIP RAI1 VGLL3
KRAS.PROSTATE_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/KRAS.PROSTATE_UP.V1_UP APOBEC3G NES REEP2 HABP2 AICDA CEL ETV5 ITGB2 TPK1 FAM155B MMP17 MMP11 LMO1 CD79A TLR4 CR2 PDK4 FGF22 GLB1L2 ZSWIM1 ITGA2 FSD1 CRISP2 RFPL3-AS1 PIGR GSTCD ZNF529 BANK1 LAPTM5 C11orf41 STRN APOH DHRS9 AHSG CATR1 CNGB3 GRK5 CX3CL1 TG CNTN5 KRT8P12 NPY6R MYO7B LOC645340 CRISP1 OPLAH KRT36 FOXH1 ANGPTL4 LPPR1 LILRA6 TWIST1 RGS13 INSM1 LOC651803 SYT5 HKDC1 CADPS2 ABHD8 MAP3K1 IL7R NOL4 C2orf67 EMID2 TUBA8 LAIR2 RAB40C ADM2 TIMP4 OR7E24 LRCH1 TNNI1 CES1P1 LIN7B CYP2R1 TRIM31 CD80 TGFBR1 FGF21 MAP4K1 CFH C17orf53 ADRA1B LIMD2 DNM1 RARRES2 ATXN3L HAL THSD4 YPEL1 TSSK2 ACOX2 ZEB1 NR4A3 SLCO1C1 CAMK2B C5orf42 PADI3 SLC10A2 FEZ1 MEGF8 PLLP ANKRD34C JAM2 IL1RL2 KLRG1 CHRNA3 C6orf103 PCDHA2 FOXF2 LRRC15 TEX12 SV2C ENG ANP32C LOC440334 KREMEN2 ARHGAP24 IFNA7 MLXIPL CFHR2 POPDC2 SLC7A4 OR10J1 IDI2-AS1 FABP3 FGA KHDC1 NBEA PTPN7 PLCH2 SYNPO2 PRO2964 CBX4 CDH4 IL10RA MYOC LINC00341 MAGEB3 MYRIP VEGFC NXPH3 PPYR1
LEF1_UP.V1_DN http://www.broadinstitute.org/gsea/msigdb/cards/LEF1_UP.V1_DN AGR2 ID3 IL18 SEPP1 SELENBP1 CDH17 PRSS8 GDPD3 ERAP2 TSPAN8 MOSC1 ERN2 RAB25 TRAF3IP2 C4BPB NME3 PAPSS2 AIM1 CXCL5 TMED3 GSTM3 PLOD2 FBXL15 RBM47 OLR1 GSPT2 CNN3 PCP4 CDX2 NLRP2 HERC6 OAS1 MYRIP S100A14 MANSC1 PITX2 PDGFRL SCG5 OAS3 TEX14 TLR3 HDHD1 HNF1B LGR5 DPP4 SMAD4 FPGT CTSH LIMCH1 CFTR SLC6A20 SH3GL2 KIT HAUS4 ATP1B1 CPOX EHMT2 TRPM4 DMXL2 CYP1B1 GALC KCNQ1 MLLT3 CYP26B1 NUDT18 RAB27B IL17RB XK FOXA1 CYP2J2 PROS1 TMPRSS3 ENTPD3 CCL20 MVP MEF2C ELF3 DAPK1 MANBA KLRC3 CXCL2 SLC22A18 PRR15L OSGEPL1 RNF144A SORL1 MOCOS FAM59A ELL3 SLC44A4 GRB14 GATA6 TNFSF15 AP1M2 KIAA0319L ENC1 ALDH5A1 ACSF2 ANKFY1 TMEM14A ATP2A1 TM4SF1 ATP8A1 EHF SEC31B PTPN13 ID1 EFNB2 VILL USP18 HCFC1R1 ALCAM PF4 FGFBP1 TMEM144 DPYSL3 TMEM53 TPM1 PIAS3 TFF1 AKR1C3 EFHD1 PLSCR4 GALNT12 KRT20 RAB26 PDGFC PDZK1IP1 CAT C9orf86 SLC1A1 FAM172A COCH SULT1C2 STAT4 KIAA0485 CTGF SAMD9 BTN3A3 KDM5D FAM134B NSUN6 RAC2 TNNC1 ACSL5 PRSS1 BDKRB2 ANK3 IL33 RHOBTB2 RBP4 MDFIC IL20RA GDE1 DECR1 KCNV1 TSPAN1 C1orf115 MANEA PLAC8 MFGE8 SEMA3F MARCH2 PAK1 SH3BGRL ZNF711 SLC24A1 MGC12488 DDX58 TNS3 CDK3 NUDT6 SMPDL3A C5orf45 BDH2 CPE MXD3 OPN3 CLEC2D KLRF1 TMEM135 HOXB13 DYNC2LI1 MST1P9 DISC1 FAM83E TCEAL1 RRAGB DIXDC1 PLLP
LEF1_UP.V1_UP http://www.broadinstitute.org/gsea/msigdb/cards/LEF1_UP.V1_UP RBP1 NELL2 MSN KRT23 IGFBP7 KRT5 CCND2 ANO1 ELOVL5 PLTP CRIP1 FOXF2 TMEM22 DHRS2 PRF1 TGM2 C10orf116 TRIM48 DCLK1 L1CAM TUBB2B G0S2 PDLIM4 HBA2 GZMB VIM PRKCDBP CBS KRT81 CHST11 FBXO17 DBN1 SLC43A3 C13orf15 PAX6 NTSR1 DKK4 ZAP70 FOXG1 OBSL1 LMO2 FHL1 SLC17A9 FGF3 PMEPA1 KRT13 WASF3 STRA6 COL9A3 EDAR SPRR2B SLC26A4 HOXB2 HAS2 CDA RUNX3 STC2 LGALS1 PHLDA3 MAOA CARD9 SLC2A3 MIA NR3C1 RRAGD ZNF22 WT1 S100A2 ZNF350 LOXL1 GNG11 PCSK1N INHBE SERPINE1 AXL SLIT1 APOBEC3G EN2 GNG4 EMP1 NRIP3 SLC5A3 ARHGAP4 EGR3 PDGFA SCML1 LINC00341 ZNF236 AKAP12 PDZD2 S100A3 AUTS2 RYR1 SH2D2A ARC FOSL1 LCK CCR7 RAI2 ZFPM2 KCNJ12 DNAJC6 LPL ADAM19 CDKN2A HSPA1A DENND1C MAOB FLNC CD302 DKK1 PLEKHF1 PTPRN2 KCNG1 TM4SF5 FADS1 CXCR4 C14orf132 FN1 TMEM47 CHST2 KCNN4 ZNF134 PLEKHO1 CRABP2 PRPS1 TRPV2 MFAP2 EMP3 TREML2 S100A4 PTGDS FGF9 CST7 ARID3B GPR64 MAP1B ERVMER34-1 ISYNA1 WNT5A TMOD1 COL6A1 CTH KCTD12 CEACAM21 NRIP1 EGR2 ARG2 LTBP2 CYBRD1 MPP6 NES GNAL EMR2 SCN5A HEY2 KRT76 PRKAA2 RPP25 NMNAT2 ROR2 TH IGFBP6 GATA3 IL11 ADAMTS8 CXCR2 TMEM158 FNBP1 CHGB PRPH MLN TNFRSF1B BMP7 CHST10 FNDC4 TCHH TULP2 WWC2 MYL9 TCEA2 ALLC GJB1 FGF13 SLC6A8 MAP7D3 TRPV6 RAMP2 EPB41L4A PARVB DLL3 PCSK5 PELI2 FJX1 ELK3