From 54c21120d11afcba04191841b9abfb538d501ca7 Mon Sep 17 00:00:00 2001 From: root Date: Wed, 4 Mar 2015 13:16:35 +0100 Subject: [PATCH] Added loc file for galaxy --- admire_regions.loc | 9 +++++++++ 1 file changed, 9 insertions(+) create mode 100644 admire_regions.loc diff --git a/admire_regions.loc b/admire_regions.loc new file mode 100644 index 0000000..9bc02a0 --- /dev/null +++ b/admire_regions.loc @@ -0,0 +1,9 @@ +prom2kb prom2kb Promoter Regions (2kB) /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/gencode/gencode.v19.genes_promoter2000.bed +exons exons Exons /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/gencode/gencode.v19.exons.bed +cpgi cpgi CpG Islands /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/illumina/ilmn12.hg19.cpgislands.sorted.bed +enhancers enhancers Fantom5 enhancers /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/fantom5/hg19_permissive_enhancers.bed +t50 t50 50bp tiling regions /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/tilings/hg19.50bp.tilings.bed +t300 t300 300bp tiling regions /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/tilings/hg19.300bp.tilings.bed +t500 t500 500bp tiling regions /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/tilings/hg19.500bp.tilings.bed +t1kb t1kb 1kb tiling regions /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/tilings/hg19.1000bp.tilings.bed +t100kb t100kb 100kb tiling regions /mnt/flatfiles/organisms/human/hg19_GRCh37/annotation/tilings/hg19.100000bp.tilings.bed