diff --git a/bin/2.2_motif_estimation/get_best_motif.py b/bin/2.2_motif_estimation/get_best_motif.py index 7f9589d..532a1f3 100644 --- a/bin/2.2_motif_estimation/get_best_motif.py +++ b/bin/2.2_motif_estimation/get_best_motif.py @@ -1,3 +1,5 @@ +#!/usr/bin/env python + ''' parses arguments using argparse @return args list of all parameters diff --git a/bin/2.2_motif_estimation/get_motif_seq.R b/bin/2.2_motif_estimation/get_motif_seq.R index 6f298b3..dda4bd3 100644 --- a/bin/2.2_motif_estimation/get_motif_seq.R +++ b/bin/2.2_motif_estimation/get_motif_seq.R @@ -32,7 +32,7 @@ read_data <- function(path){ #' @param output Output JSON-file #' @param num Get best (num) motifs. #' -#' @author Ren� Wiegandt +#' @author René Wiegandt create_seq_json <- function(input, output, num, tmp_path, cluster_id) { if (!file.exists(input)) { diff --git a/bin/2.2_motif_estimation/motif_estimation.nf b/bin/2.2_motif_estimation/motif_estimation.nf index 430040e..f0eb530 100644 --- a/bin/2.2_motif_estimation/motif_estimation.nf +++ b/bin/2.2_motif_estimation/motif_estimation.nf @@ -1,3 +1,4 @@ +#!/usr/bin/env nextflow params.bed = "" params.out = ""