From 5a7a52683b15b85946779d8e04abc792866fa586 Mon Sep 17 00:00:00 2001
From: anastasiia <anastasiia.petrova@mni.thm.de>
Date: Mon, 10 Dec 2018 14:52:53 +0100
Subject: [PATCH] improvement of parameters for my part

---
 README.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/README.md b/README.md
index f53d9df..09b7ee3 100644
--- a/README.md
+++ b/README.md
@@ -45,8 +45,8 @@ nextflow run pipeline.nf --input [BigWig-file] --bed [BED-file] --genome_fasta [
 For a detailed overview for all parameters follow this [link](https://github.molgen.mpg.de/loosolab/masterJLU2018/wiki/Configuration).
 ```
 Required arguments:
-	--input Path to BigWig-file
-	--bed Path to BED-file
+	--input Path to BigWig-file with scores on the peaks of interest
+	--bed Path to BED-file with peaks of interest corresponding to the BigWig file
 	--genome_fasta Path to genome in FASTA-format
 	--jaspar_db Path to motif-database in MEME-format