From a390459b6bcf1fb13fe66cdca836502503f73ca4 Mon Sep 17 00:00:00 2001
From: renewiegandt <rene.wiegandt@mpi-bn.mpg.de>
Date: Sat, 15 Dec 2018 00:54:40 +0100
Subject: [PATCH] Update pipeline.nf

---
 pipeline.nf | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/pipeline.nf b/pipeline.nf
index 0855e37..d4a1a11 100644
--- a/pipeline.nf
+++ b/pipeline.nf
@@ -58,6 +58,8 @@
 
 if (params.bigwig == "" || params.bed == "" || params.genome_fasta == "" || params.motif_db == "" || params.config == ""){
 log.info """
+Usage: nextflow run pipeline.nf --bigwig [BigWig-file] --bed [BED-file] --genome_fasta [FASTA-file] --motif_db [MEME-file]
+ 
 Required arguments:
 	--bigwig		 Path to BigWig-file
 	--bed			 Path to BED-file