diff --git a/RegGTFExtractor.py b/RegGTFExtractor.py index 0b2b662..294e539 100755 --- a/RegGTFExtractor.py +++ b/RegGTFExtractor.py @@ -5,10 +5,22 @@ from Modules.ucsc.ucsc import UcscGtf from Modules.Uniquifier import UniqueFilter from Modules.SaveResults import ResultSaver +import os + + +def check_for_local_folder(): + + if not os.path.isdir("./EnsemblData"): + + os.mkdir("./EnsemblData") + + if not os.path.isdir( "./UCSCData" ): + os.mkdir( "./UCSCData" ) def main_script(org, tissuetype=None): + check_for_local_folder() ucsc = UcscGtf(org) ense = Ensembl(org) print("Getting Unique Results")