diff --git a/config/motif_estimation.config b/config/motif_estimation.config
index e69de29..a00fc86 100644
--- a/config/motif_estimation.config
+++ b/config/motif_estimation.config
@@ -0,0 +1,11 @@
+params {
+	//bed_to_clustered_fasta
+	min_seq = 10
+	
+	//glam2
+	motif_min_len = 10
+	motif_max_len = 20
+
+	//tomtom
+	tomtom_treshold = 0.01
+}
\ No newline at end of file
diff --git a/config/peak_calling.config b/config/peak_calling.config
index e69de29..566925e 100644
--- a/config/peak_calling.config
+++ b/config/peak_calling.config
@@ -0,0 +1,5 @@
+params{
+	window_length = 
+	step = 
+	threshold_footprint_extraction =
+}
\ No newline at end of file