Skip to content

bed_to_fasta.R: Get column nucleotide_sequence and cluster_id as second last and last column #11

Closed
renewiegandt opened this issue Dec 18, 2018 · 1 comment
Assignees
Labels
bug Something isn't working

Comments

@renewiegandt
Copy link
Collaborator

The BED-file the script 'bed_to_fasta.R' gets as input has a variable number of columns.
Instead of using fixed column indices it should get the second last (contains nucleotide sequences) and last column (contains cluster_id) by counting all columns.

@renewiegandt renewiegandt self-assigned this Dec 18, 2018
@HendrikSchultheis HendrikSchultheis mentioned this issue Dec 18, 2018
35 tasks
@renewiegandt renewiegandt added the bug Something isn't working label Dec 19, 2018
@renewiegandt
Copy link
Collaborator Author

Fixed by #12

Sign in to join this conversation on GitHub.
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant