From 6258bfe84ef00b3dc5da68996a014ee03b0060ba Mon Sep 17 00:00:00 2001 From: anastasiia Date: Mon, 14 Jan 2019 12:08:48 +0100 Subject: [PATCH] rename the parameter for 1.1! min_gap instead of max_bp_between --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index c26cd51..7f3da58 100644 --- a/README.md +++ b/README.md @@ -69,7 +69,7 @@ Optional arguments: --window_length INT This parameter sets the length of a sliding window. (Default: 200) --step INT This parameter sets the number of positions to slide the window forward. (Default: 100) --percentage INT Threshold in percent (Default: 0) - --max_bp_between INT If footprints are less than X bases appart the footprints will be merged (Default: 6) + --min_gap INT If footprints are less than X bases appart the footprints will be merged (Default: 6) Filter motifs: --min_size_fp INT Minimum sequence length threshold. Smaller sequences are discarded. (Default: 10)