getStatistics.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/evaluate.R
\name{getStatistics}
\alias{getStatistics}
\title{Statistics}
\usage{
getStatistics(evaluations)
}
\arguments{
\item{evaluations}{list of named evaluations}
}
\value{
A data frame with the percentual proportion of as TRUE or FALSE evaluated values
}
\description{
This function produces informations about the evaluation of the three
algorithms. The result is a data frame where the percentage of as TRUE and
as FALSE evaluated values of the genes
}
\examples{
\dontrun{
params <- newParams(nGenes = list("1"=10,"2"=list("gauss"= 10,"gamma"= 10)))
simulation <- simulateExpression(params= params,verbose=FALSE)
expression <- simulation$expressionData
validationData <- simulation$validationData
mclustOutput <- useMclust(expression = expression,verbose = FALSE)
hdbscanOutput <- useHdbscan(expression = expression,verbose = FALSE)
mclustEvaluation <- evaluateAlgorithmOutput(modality = 2,algorithmOutput = mclustOutput,
validationData = validationData)
hdbscanEvaluation <- evaluateAlgorithmOutput(modality = 2,algorithmOutput = hdbscanOutput,
validationData = validationData)

#getStatistics of one algorithm
getStatistics(evaluations = list("mclust"=mclustEvaluation))
#getStatistics of two or more algorithms
getStatistics(evaluations = list("mclust"=mclustEvaluation,"HDBSCAN"=hdbscanEvaluation))
}
}