From 2f4d06fe13493137abb61752784c2a46ec16072e Mon Sep 17 00:00:00 2001 From: thomas Date: Tue, 20 Apr 2021 17:05:14 +0200 Subject: [PATCH] usrlocalpkg: Fix macs2, adjust python-3.8.9 Rationale: The macs2-utility from python-2.7.16 owns a shared library that is incompatible with the recent glibc. macs2 has been 'ported' to python3 in the meantime, so the config needs to reflect this, whereas the old version just remains defunct. Also added: macs3, and stacked-git (stg) --- usrlocalpkg/admin/config | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/usrlocalpkg/admin/config b/usrlocalpkg/admin/config index f86e23e..68824bf 100644 --- a/usrlocalpkg/admin/config +++ b/usrlocalpkg/admin/config @@ -568,7 +568,6 @@ python-2=python-2.7 pip2 ipython2 virtualenv2=virtualenv - macs2 python2=python-2 # this has been published @@ -1337,7 +1336,7 @@ python-3.7=python-3.7.7-0 python3.7=python-3.7 -python-3.8=python-3.8.9-0 +python-3.8=python-3.8.9-1 python3.8 python3.8-config pip3.8 @@ -1374,6 +1373,8 @@ python=python-3 ipython jupyter jupyter-lab + macs2 + macs3 meson multiqc nbshow @@ -1382,6 +1383,7 @@ python=python-3 pip pyGenomeTracks snakemake + stg tadtool thonny umi_tools