From 11b8d2a662b71be76bcc955c8520422226dba733 Mon Sep 17 00:00:00 2001 From: Donald Buczek Date: Thu, 19 May 2022 11:25:31 +0200 Subject: [PATCH 1/3] usrlocalpkg: Change python default from 3.9.7 to 3.9.12 --- usrlocalpkg/admin/config | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/usrlocalpkg/admin/config b/usrlocalpkg/admin/config index 87e771f..557f2c6 100644 --- a/usrlocalpkg/admin/config +++ b/usrlocalpkg/admin/config @@ -1368,7 +1368,7 @@ python-3.8=python-3.8.9-1 python3.8=python-3.8 -python-3.9=python-3.9.7-0 +python-3.9=python-3.9.12-0 python3.9 python3.9-config pip3.9 From e50f2549df17ee1b53fb74a67b3935adf0d2f774 Mon Sep 17 00:00:00 2001 From: Donald Buczek Date: Thu, 19 May 2022 11:47:34 +0200 Subject: [PATCH 2/3] usrlocalpkg: Correct snakemake6 alias snakemake in python-3.9.12-0 is 7.7.0, so point snakemake6 to snakemake 6.8.0 in python-3.9.7-0 as before. --- usrlocalpkg/admin/config | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/usrlocalpkg/admin/config b/usrlocalpkg/admin/config index 557f2c6..255a94f 100644 --- a/usrlocalpkg/admin/config +++ b/usrlocalpkg/admin/config @@ -1368,12 +1368,14 @@ python-3.8=python-3.8.9-1 python3.8=python-3.8 +python-3.9.7-0 + snakemake6=snakemake + python-3.9=python-3.9.12-0 python3.9 python3.9-config pip3.9 pydoc3.9 - snakemake6=snakemake python3.9=python-3.9 From 6a745b2de1c0a4e7cf44db699dcd8910552462c9 Mon Sep 17 00:00:00 2001 From: Donald Buczek Date: Thu, 19 May 2022 12:11:19 +0200 Subject: [PATCH 3/3] usrlocalpkg: Update snakemake7 Snakemake has version 7.7.0 in the new python 3.9.12 package, so prefer this newer version for the snakemake7 alias over the version in the snakemake 7.1.1 package. --- usrlocalpkg/admin/config | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/usrlocalpkg/admin/config b/usrlocalpkg/admin/config index 255a94f..a1642bd 100644 --- a/usrlocalpkg/admin/config +++ b/usrlocalpkg/admin/config @@ -1371,6 +1371,9 @@ python3.8=python-3.8 python-3.9.7-0 snakemake6=snakemake +python-3.9.12-0 + snakemake7=snakemake + python-3.9=python-3.9.12-0 python3.9 python3.9-config @@ -1427,9 +1430,6 @@ python=python-3 virtualenv virtualenv3=virtualenv -snakemake-7.1.1-0 - snakemake7=snakemake - rstudio-1.1.383-0 rstudio-1.1=rstudio