From bf0107dbb0189d3b6c32a313bfb104c6977e7359 Mon Sep 17 00:00:00 2001
From: thomas <kreitler@molgen.mpg.de>
Date: Thu, 16 Jun 2022 18:52:13 +0200
Subject: [PATCH 1/2] rstudio: create build script

cp rstudio-debpkg-1.4.1717-0.build.sh \
   rstudio-2022.02.3-492-0.build.sh
---
 rstudio-2022.02.3-492-0.build.sh | 70 ++++++++++++++++++++++++++++++++
 1 file changed, 70 insertions(+)
 create mode 100755 rstudio-2022.02.3-492-0.build.sh

diff --git a/rstudio-2022.02.3-492-0.build.sh b/rstudio-2022.02.3-492-0.build.sh
new file mode 100755
index 0000000..08e07cb
--- /dev/null
+++ b/rstudio-2022.02.3-492-0.build.sh
@@ -0,0 +1,70 @@
+#! /bin/bash
+
+# utilize the 'debian'-package from rstudio site, take for reference, or fallback
+
+PKG=rstudio-debpkg
+VERSION=1.4.1717
+BUILD=0
+
+PREFIX=/pkg/$PKG-$VERSION-$BUILD
+if [ -n "$TESTING" ]; then PREFIX=/dev/shm/$PKG-$VERSION-$BUILD ; fi
+
+set -xe
+umask 022
+
+BUILD_TMPDIR=/dev/shm/$PKG-$VERSION-$BUILD.build.tmp
+test -d $BUILD_TMPDIR && ( chmod -R u+rwx $BUILD_TMPDIR || true ; rm -rf $BUILD_TMPDIR )
+mkdir -p $BUILD_TMPDIR/home
+export TMPDIR=$BUILD_TMPDIR
+export HOME=$BUILD_TMPDIR/home
+
+#       mind the PATH ...
+# ----------------------------
+#  it should work with:
+#      prun R4 rstudio
+#      xfce launcher
+#      own R on the path
+
+mkdir -p $PREFIX
+cat >$PREFIX/profile <<-EOF
+	PATH=$PREFIX/bin:\$PATH:/usr/local/package/bin
+	if [ -d $PREFIX/.compatlibs ]; then export LD_LIBRARY_PATH=$PREFIX/.compatlibs\${LD_LIBRARY_PATH:+:}\$LD_LIBRARY_PATH ; fi
+EOF
+. $PREFIX/profile
+
+BUILD=$PREFIX/build
+
+mkdir -p $BUILD
+cd $BUILD
+
+# orig: https://download1.rstudio.org/desktop/bionic/amd64/rstudio-1.4.1717-amd64-debian.tar.gz
+BEEHIVE=https://beehive.molgen.mpg.de/4fb9f00470f0c938df9e7319c54b7b4d/rstudio-1.4.1717-amd64-debian.tar.gz
+
+test -e rstudio-$VERSION-amd64-debian.tar.gz  || wget -nv $BEEHIVE
+test -d rstudio-$VERSION  || tar -xf rstudio-$VERSION-amd64-debian.tar.gz
+
+mv -v rstudio-$VERSION/* ..
+
+cat >$PREFIX/bin/rstudio-nv <<-'EOF'
+	#! /bin/bash
+
+	# This allows using rstudio on a compute server, when the users machine
+	# has the nvidia driver loaded and rstudio gets confused.
+	# Drawback, this only works if not part of a ssh hopp along chain.
+
+	if [ -n "$SSH_CLIENT" ]; then
+	  REMOTEIP=${SSH_CLIENT%% *}
+	  MXGFX=$(ssh $REMOTEIP readlink -f /node/usr_share_mxgfx | grep nvidia)
+	  if [ -n "$MXGFX" ]; then
+	    echo "# offering $MXGFX to desktop client..."
+	    LD_LIBRARY_PATH=$MXGFX/lib${LD_LIBRARY_PATH:+:}$LD_LIBRARY_PATH
+	    export LD_LIBRARY_PATH
+	  fi
+	fi
+
+	exec rstudio "${@+$@}"
+EOF
+
+chmod +x $PREFIX/bin/rstudio-nv
+
+exit

From 74dda9afb6127fca36c3c51db3ecf75d0c975427 Mon Sep 17 00:00:00 2001
From: thomas <kreitler@molgen.mpg.de>
Date: Thu, 16 Jun 2022 18:59:05 +0200
Subject: [PATCH 2/2] rstudio: adjust version

---
 rstudio-2022.02.3-492-0.build.sh | 17 +++++++++--------
 1 file changed, 9 insertions(+), 8 deletions(-)

diff --git a/rstudio-2022.02.3-492-0.build.sh b/rstudio-2022.02.3-492-0.build.sh
index 08e07cb..909dab2 100755
--- a/rstudio-2022.02.3-492-0.build.sh
+++ b/rstudio-2022.02.3-492-0.build.sh
@@ -1,9 +1,10 @@
 #! /bin/bash
 
-# utilize the 'debian'-package from rstudio site, take for reference, or fallback
+# use the debian build from rstudio site (Ubuntu 18+/Debian 10+)
 
-PKG=rstudio-debpkg
-VERSION=1.4.1717
+PKG=rstudio
+VERSION=2022.02.3-492
+VERSIONP=${VERSION/-/+} # just brilliant !
 BUILD=0
 
 PREFIX=/pkg/$PKG-$VERSION-$BUILD
@@ -12,7 +13,7 @@ if [ -n "$TESTING" ]; then PREFIX=/dev/shm/$PKG-$VERSION-$BUILD ; fi
 set -xe
 umask 022
 
-BUILD_TMPDIR=/dev/shm/$PKG-$VERSION-$BUILD.build.tmp
+BUILD_TMPDIR=/dev/shm/$PKG-$VERSION-$BUILD.$USER.build.tmp
 test -d $BUILD_TMPDIR && ( chmod -R u+rwx $BUILD_TMPDIR || true ; rm -rf $BUILD_TMPDIR )
 mkdir -p $BUILD_TMPDIR/home
 export TMPDIR=$BUILD_TMPDIR
@@ -37,13 +38,13 @@ BUILD=$PREFIX/build
 mkdir -p $BUILD
 cd $BUILD
 
-# orig: https://download1.rstudio.org/desktop/bionic/amd64/rstudio-1.4.1717-amd64-debian.tar.gz
-BEEHIVE=https://beehive.molgen.mpg.de/4fb9f00470f0c938df9e7319c54b7b4d/rstudio-1.4.1717-amd64-debian.tar.gz
+# orig: https://download1.rstudio.org/desktop/bionic/amd64/rstudio-2022.02.3-492-amd64-debian.tar.gz
+BEEHIVE=https://beehive.molgen.mpg.de/f68c6713864cc12967a7414ab6040e1f/rstudio-2022.02.3-492-amd64-debian.tar.gz
 
 test -e rstudio-$VERSION-amd64-debian.tar.gz  || wget -nv $BEEHIVE
-test -d rstudio-$VERSION  || tar -xf rstudio-$VERSION-amd64-debian.tar.gz
+test -d rstudio-$VERSIONP  || tar -xf rstudio-$VERSION-amd64-debian.tar.gz
 
-mv -v rstudio-$VERSION/* ..
+mv -v rstudio-$VERSIONP/* ..
 
 cat >$PREFIX/bin/rstudio-nv <<-'EOF'
 	#! /bin/bash