From 961b8f5d53bf9f953c4a43fceb68d3b801f36420 Mon Sep 17 00:00:00 2001
From: david <schrader@molgen.mpg.de>
Date: Fri, 27 Mar 2020 11:46:43 +0100
Subject: [PATCH] python-3.7.6: Add boost for pycuda

---
 python-3.7.6-0.build.sh | 40 ++++++++++++++++++++++++++++++++++++++++
 1 file changed, 40 insertions(+)

diff --git a/python-3.7.6-0.build.sh b/python-3.7.6-0.build.sh
index bd3b599..aa6ed56 100755
--- a/python-3.7.6-0.build.sh
+++ b/python-3.7.6-0.build.sh
@@ -241,6 +241,46 @@ pip3 install --prefix=$PREFIX libxml2-python3 # required by several bee packages
 pip3 install --prefix=$PREFIX scour           # https://github.molgen.mpg.de/mariux64/pkg-scripts/issues/98
 pip3 install --prefix=$PREFIX multiqc
 
+#boost for pycuda
+(
+	. ${PREFIX}/profile
+	BOOST_VERSION="1.72.0 1_72_0"
+	BOOST_SRC=https://dl.bintray.com/boostorg/release/$( echo $BOOST_VERSION | cut -d" " -f1 )/source/boost_$( echo $BOOST_VERSION | cut -d" " -f2 ).tar.gz
+	PKGCFLAGS="-O2 -fPIC"
+
+	cd $BUILDDIR
+	test -e boost_$( echo $BOOST_VERSION | cut -d" " -f2 ).tar.gz || wget $BOOST_SRC
+	test -d boost-$( echo $BOOST_VERSION | cut -d" " -f1 ) || mkdir boost-$( echo $BOOST_VERSION | cut -d" " -f1 ) && tar -xf boost_$( echo $BOOST_VERSION | cut -d" " -f2 ).tar.gz -C boost-$( echo $BOOST_VERSION | cut -d" " -f1 ) --strip-components=1
+
+	cd boost-$( echo $BOOST_VERSION | cut -d" " -f1 )
+	sed -e "/using python/ s|;|: ${PREFIX}/include/python${PYTHONVER}m ;|" \
+      -i bootstrap.sh
+
+	./bootstrap.sh \
+    --with-toolset=gcc \
+    --with-icu \
+    --with-python=$PREFIX/bin/python3 \
+    --with-libraries=python,thread || exit 1
+
+  ./b2 \
+    $NUMJOBS \
+    --layout=system \
+    --build-dir=build-python3 \
+    --prefix=$PREFIX \
+    --libdir=$PREFIX/lib \
+    --build-type=minimal \
+    toolset=gcc \
+    variant=release \
+    debug-symbols=off \
+    link=shared \
+    threading=multi \
+    runtime-link=shared \
+    python=$PYTHONVER \
+    cflags="$PKGCFLAGS" \
+    cxxflags="$PKGCFLAGS" \
+    install || exit 1
+)
+
 # try to load all packages, maybe we can see installation errors
 python3 -c 'help("modules")' > /dev/null