From 3f1bd39fcb7e7586452e8d43ed5c3bfd58569a68 Mon Sep 17 00:00:00 2001
From: David Popovic <David.Popovic@med.uni-muenchen.de>
Date: Tue, 16 Aug 2022 15:39:11 +0200
Subject: [PATCH] Delete dp_results_collection_clean.m

---
 dp_results_collection_clean.m | 73 -----------------------------------
 1 file changed, 73 deletions(-)
 delete mode 100644 dp_results_collection_clean.m

diff --git a/dp_results_collection_clean.m b/dp_results_collection_clean.m
deleted file mode 100644
index 7a44edc..0000000
--- a/dp_results_collection_clean.m
+++ /dev/null
@@ -1,73 +0,0 @@
-%% DP function to analyze results in varying grid densities
-% addpath(genpath('/opt/NM/NeuroMiner_Elessar_1.10_beorn/'));
-addpath(genpath('/opt/NM/NeuroMiner_Elessar_1.11_beorn/'));
-% addpath(genpath('/opt/NM/test_versions/NeuroMiner_May16_2022/'));
-addpath('/opt/SPM/spm12_v6685_cat12_r1207/');
-addpath(genpath('/volume/DP_FEF/ScrFun/ScriptsRepository'));
-addpath(genpath('/opt/PRONIASoftware/Developpment/DataAllCron/PRONIA_JuliaCode'));
-
-results_paths = {'/volume/HCStress/Analysis/10-Jun-2022/CISS_636_IQRadd_NCV55_single_folds_bestmerge_noval_min10_2020_5000AUC_Dev_2022/final_results/result_BS.mat'};
-
-IN.atlases_chosen = {'yeo', 'buckner', 'brainnetome', 'cerebellum', 'YB17', 'YB7', 'YB8'};
-IN.atlas_directory = '/volume/HCStress/Data/MRI/Atlases';
-IN.plot_all = false;
-IN.specific = {'atlas', 'behavior', 'images'}; % 'atlas', 'behavior', 'images', 'sociodemographic', 'medication_wais', 'outcome', 'medication_wais'
-IN.SD_selection = {'BDI', 'PANSS', 'GAF', 'NEO', 'WHO', 'neurocognition'}; %'BDI', 'GAF', 'NEO', 'QOL'
-IN.type = 1; % 1:new, 2:old
-IN.analysis_origin = 1; % 1: PRONIA, 2: other
-
-for i=1:numel(results_paths)
-    
-    IN.results_path = results_paths{i};
-    load(IN.results_path)
-%     input.X = input.MRI;
-    max_iter = 1;
-    
-    if isfield(output, 'validation_results')
-        max_iter=2;
-    end
-    
-    for a=1:max_iter
-        
-        switch a
-            
-            case 1
-                IN.results_path = results_paths{i};
-                IN.results_path = strrep(IN.results_path, '.mat', '_final_vis.mat');
-                save(IN.results_path, 'input', 'output', 'setup');
-            case 2
-                IN.results_path = results_paths{i};
-                IN.results_path = strrep(IN.results_path, '.mat', '_validation_vis.mat');
-                save(IN.results_path, 'input', 'output', 'setup');
-        end
-        
-        if contains(IN.results_path, 'CTQ') & ~contains(IN.results_path, 'immune', 'IgnoreCase', true)
-            IN.overall_analysis = 'Stress';
-        elseif contains(IN.results_path, 'CISS')
-            IN.overall_analysis = 'Resilience';
-        elseif contains(IN.results_path, 'WSS')
-            IN.overall_analysis = 'Schizotypy';
-        elseif contains(IN.results_path, 'Mimics')
-            IN.overall_analysis = 'Mimics';
-        elseif contains(IN.results_path, 'immune', 'IgnoreCase', true)
-            IN.overall_analysis = 'immune';
-        elseif contains(IN.results_path, 'MDD', 'IgnoreCase', true)
-            IN.overall_analysis = 'MDD_Trauma';
-        elseif contains(IN.results_path, 'FF', 'IgnoreCase', true)
-            IN.overall_analysis = 'FF';
-        elseif contains(IN.results_path, 'COPE', 'IgnoreCase', true)
-            IN.overall_analysis = 'COPE';
-        else
-            disp('Something''s wrong!');
-        end
-        
-        dp_visualize_data_Devmod(IN);
-        
-    end
-    
-end
-
-% compute adjusted p values (FDR)
-% output = dp_fdr_posthoc_adjust(results_paths{1});
-
-