From 0418f9fc5b7846a052fc235d58abeeda16c519eb Mon Sep 17 00:00:00 2001
From: "Vera N. Karlbauer" <vera@karlbauer.org>
Date: Fri, 7 Mar 2025 10:55:07 +0100
Subject: [PATCH] Fixed package names for installation

---
 scripts/2_import_raw_DNAm_data.Rmd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/scripts/2_import_raw_DNAm_data.Rmd b/scripts/2_import_raw_DNAm_data.Rmd
index 3c84dd1..6b31569 100644
--- a/scripts/2_import_raw_DNAm_data.Rmd
+++ b/scripts/2_import_raw_DNAm_data.Rmd
@@ -29,7 +29,7 @@ if (any(installed_biocmanager_packages == FALSE)) {
 lapply(needed_biocmanager_packages, library, character.only = TRUE)
 
 if (user_choices$array_type == "v2") {
-  if (!("jokergoo/IlluminaHumanMethylationEPICv2manifest" %in% rownames(installed.packages()))) {
+  if (!("IlluminaHumanMethylationEPICv2manifest" %in% rownames(installed.packages()))) {
     BiocManager::install("jokergoo/IlluminaHumanMethylationEPICv2manifest")
   }
   if (!("IlluminaHumanMethylationEPICv2anno.20a1.hg38" %in% rownames(installed.packages()))) {