From b7e64a00bdfa6e16ca28b09d93b803612103963f Mon Sep 17 00:00:00 2001 From: "Vera N. Karlbauer" Date: Tue, 13 Aug 2024 17:49:15 +0200 Subject: [PATCH] Changed name of unfiltered annotation --- scripts/6_filtering_cpgs.Rmd | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/scripts/6_filtering_cpgs.Rmd b/scripts/6_filtering_cpgs.Rmd index 14b0004..e0870b2 100644 --- a/scripts/6_filtering_cpgs.Rmd +++ b/scripts/6_filtering_cpgs.Rmd @@ -436,7 +436,8 @@ save(Ms_clean_filtered, file = paste0(user_choices$project_name, "/processed_dat ```{r, save annotations, include=FALSE} # unfiltered -save(annotations_clean, file = paste0(user_choices$project_name, "/reports/annotations_clean.Rdata")) +annotations_clean_unfiltered <- annotations_clean +save(annotations_clean_unfiltered, file = paste0(user_choices$project_name, "/reports/annotations_clean_unfiltered.Rdata")) # filtered annotations_clean_filtered <- getAnnotation(gRatioSet_clean_filtered) save(annotations_clean_filtered, file = paste0(user_choices$project_name, "/reports/annotations_clean_filtered.Rdata"))