From ce3ed4c6e20257a13ae0f1e3c2f079be80754ada Mon Sep 17 00:00:00 2001 From: sepro Date: Tue, 12 Sep 2017 15:50:10 +0200 Subject: [PATCH] added hrr + pcc cutoff to DB --- planet/models/expression/networks.py | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/planet/models/expression/networks.py b/planet/models/expression/networks.py index 361d14e..3b22829 100644 --- a/planet/models/expression/networks.py +++ b/planet/models/expression/networks.py @@ -28,6 +28,8 @@ class ExpressionNetworkMethod(db.Model): edge_type = db.Column(db.Enum("rank", "weight", name='edge_type')) probe_count = db.Column(db.Integer) + hrr_cutoff = db.Column(db.Integer) + pcc_cutoff = db.Column(db.Float) enable_second_level = db.Column(db.Boolean) probes = db.relationship('ExpressionNetwork', @@ -489,6 +491,8 @@ def read_expression_network_lstrap(network_file, species_id, description, score_ # Add network method first network_method = ExpressionNetworkMethod(species_id, description, score_type) + network_method.hrr_cutoff = limit + network_method.pcc_cutoff = pcc_cutoff network_method.enable_second_level = enable_second_level db.session.add(network_method)