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De-TE-ctor/TE_DB/README.md
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# TE_DB | |
Fasta files with known *transposable element proteins*. Should have .fasta as their extension (all .fasta file in this | |
directory will be used to build the final blast DB) | |
## Sources | |
* maize_uniprotkb_TE.fasta: Transposable element proteins from UniProtKB with term KW-0814 annotated | |
* rice_TE_only.fasta: Transposable element proteins from the rice genome | |
* ath_TE.fasta: Translated ORFs from transposable elements from *Arabidopsis thaliana* (min. length 50 aa) | |
* tomato_ITAG3.10_TE.fasta: Transposable element proteins annotated in version 3.10 from the tomato genome | |