From 70e97aff4009bdc1a0d4d956fd79b62dd42a144a Mon Sep 17 00:00:00 2001 From: sepro Date: Wed, 10 May 2017 13:25:21 +0200 Subject: [PATCH] implemented blast --- detector.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/detector.py b/detector.py index 86be950..7c20f18 100644 --- a/detector.py +++ b/detector.py @@ -77,7 +77,7 @@ def build(path, db): @click.argument('output', type=click.Path()) def blast(fasta, db, output): """ - Runs Blast + Runs Blast. usage: detector blast FASTA DB OUTPUT @@ -86,7 +86,7 @@ def blast(fasta, db, output): click.secho("Running BLASTP... ", fg='green', bold=True) - cmd = BUILD_DB_CMD % (fasta, db, output) + cmd = RUN_BLAST_CMD % (fasta, db, output) click.echo("Executing command: %s" % cmd) subprocess.call(shlex.split(cmd))