diff --git a/docs/helper.md b/docs/helper.md index bd509ea..31096dc 100644 --- a/docs/helper.md +++ b/docs/helper.md @@ -32,7 +32,7 @@ These scripts will extract the statistics used to assess the quality of samples. Scripts to generate images similar to those presented in the publication. Example data, derived from the *Sorghum bicolor* case study, in included in the repository. -### plot_network +### plot_network.py Script that plots the co-expression neighborhood for a specific gene. A PCC cutoff of 0.7 is included by default, but users can override this setting using the --cutoff parameter. Matplotlib and networkx are required for this