Error: datetime inputs (?)

[pebert]

I set up an env as described in #7 and checked out the current master of CoMIK. Following the instructions, I get the following error with Matlab 8.6.0

>> comik_wrapper('config-comik.txt');
Starting parallel pool (parpool) using the 'local' profile ... connected to 5 workers.
Error using readFastaSequences (line 54)
Function is not defined for 'datetime' inputs.

Error in comik_main_with_weight_vector (line 120)
[nPos, omittedPosIndices, allSeqsRawPosFasta] = readFastaSequences(givenPosFastaFilename, segmentSizeInBps, givenNPos, outputFolder, debugLevel, debugMsgLocation);

Error in comik_wrapper>perform_one_outer_fold_for_comik (line 219)
    [allSeqsAsBags, allSeqsConformedSetKernel, kernelweights, thetaVals, instanceWeightsInEachBag, resultString, bestVals, test_teAUROC, test_teAUPRC, predictions] = comik_main_with_weight_vector(givenPosFastaFilename, givenNegFastaFilename,
    nPosSequences, nNegSequences, oligoLen(l), maxDist, segmentSizeInBps, nClusterVals, sigmaVals, Cs, mklNorm, nFolds, testIndices, debugLevel, debugMsgLocation, outputFolder, runSummaryFilename, whetherToPlotHeatmap, computationVersion,
    whetherToVisualizeWVector);

Error in comik_wrapper (line 129)
parfor (i=1:configParams.nOuterFolds, configParams.nOuterFolds)

+Peter

[snikumbh]

Thanks for reporting, Peter. I could reproduce this error with Matlab version 8.6.0.
Kindly pull the most recent version and try again.

[pebert]

Ok, latest master seems to be fixed - I am running CoMIK on the example dataset now...