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removed '\t' as not meaningful in markdown
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puetz committed Mar 23, 2016
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10 changes: 5 additions & 5 deletions README.md
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Expand Up @@ -64,20 +64,20 @@ for more information regarding file formats.

`-device [0,1,...]` GPU identifier, starting from 0 for first Graphics Card increasing in whole numbers

`-blockSize [2,3,...]` \t parameter for optimizing runtime. See explicit paragraph beneath
`-blockSize [2,3,...]` parameter for optimizing runtime. See explicit paragraph beneath

`-threads [1,2,...]` \t Number of threads to process results. See explicit paragraph beneath
`-threads [1,2,...]` Number of threads to process results. See explicit paragraph beneath

`-alphaPercent ]0.0;50.0[` \t Significance level for two-sided test. Allowed values: ]0.0;50.0[
`-alphaPercent ]0.0;50.0[` Significance level for two-sided test. Allowed values: ]0.0;50.0[


### OPTIONAL

`-pheno [0,1,...]` \t If your phenotype file contains multiple phenotypes, you can use this flag to specify which phenotype should be used.
`-pheno [0,1,...]` If your phenotype file contains multiple phenotypes, you can use this flag to specify which phenotype should be used.
If you skip the `-pheno` flag, the first phenotype will be used (equivalent to `-pheno 0`).
The second phenotype has index 1, the third index 2 and so forth...

`-testBlockSize 1` \t This will start a test-run with only one sub-matrix to be calculated.
`-testBlockSize 1` This will start a test-run with only one sub-matrix to be calculated.
Use this flag to reduce runtime to test for the best possible value for `-blockSize`
This will not create ANY results!

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