Fix dedup/${id}_peaks.narrowPeak filename

Adapting_new_script_for_computing_cluster.sh

@@ -149,9 +149,9 @@ execute() {
 	mapFrac=$(printf "%.4f" $(echo $map / 100 | bc -l))
 	dedup=$(printf "%.4f" $(grep -Po 'Unknown Library.*' dedup/${id}_dedupMetric.txt | awk '{print $10}'))
 	filtered=$(expr $(samtools view -c dedup/${id}_dedup.bam) / 2)
-	ripReads=$(expr $(bedtools intersect -a dedup/${id}_dedup.bam -b dedup_peaks/${id}_dedup_peaks.narrowPeak -u -ubam | samtools view -c) / 2)
+	ripReads=$(expr $(bedtools intersect -a dedup/${id}_dedup.bam -b dedup_peaks/${id}_peaks.narrowPeak -u -ubam | samtools view -c) / 2)
 	FRiP=$(printf "%.4f" $(echo $fripReads / $filtered | bc -l))
-	peaks=$(expr $(wc -l <"dedup_peaks/${id}_dedup_peaks.narrowPeak") - 1)
+	peaks=$(expr $(wc -l <"dedup_peaks/${id}_peaks.narrowPeak") - 1)
 	echo -e "$id\t$fragments\t$filtered\t$mapFrac\t$dedup\t$FRiP\t$peaks" >> cnt_gata_qc_metrics.txt
 
 	# Here I have no idea how to transfer this