Skip to content
This repository has been archived by the owner. It is now read-only.

Commit

Permalink
Update config.rst
Browse files Browse the repository at this point in the history
  • Loading branch information
ckuenne authored Jun 20, 2017
1 parent c09ef69 commit 4b44016
Showing 1 changed file with 3 additions and 0 deletions.
3 changes: 3 additions & 0 deletions docs_rst/config.rst
Original file line number Diff line number Diff line change
Expand Up @@ -81,8 +81,11 @@ Each query can specify the following keys:


- **internals**: This key represents a modifier with respect to the ``'distance``' key. This can be helpful to annotate peaks to features with a wide size range, such as genes, which would otherwise be removed due to the distance thresholds. So even if the desired feature anchor is located too far away, a feature can still be included if it is overlapped.

'center': If the center of a peak intersects with a feature region or vice versa, the ``'distance``' key filtering is disabled. This parameter ensures that the majority of the peak intersects with the feature.

'any': If a peak intersects with a feature region or vice versa, the ``'distance``' key filtering is disabled. An overlap of >= 1 nt is sufficient.

Allowed values are one of ``'F', 'False', 'N', 'No'``, 'center', or 'any'.

Default: ``'any'``
Expand Down

0 comments on commit 4b44016

Please sign in to comment.