Removed some typos in Readme

README.md

@@ -21,7 +21,7 @@ export PATH=[meme-suite instalation path]/bin:$PATH
 Every other dependency will be automatically  installed by Nextflow using conda. For that a new conda enviroment will be created, which can be found in the from Nextflow created work directory after the first pipeline run.
 It is **not** required to create and activate the enviroment from the yaml-file beforehand.
 
-**Important Note:** For conda the channel bioconda needs to be set as highest priority! This is required due to two differnt packages with the same name in different channels. For the pipeline the package jellyfish from the channel bioconda is needed and **NOT** the jellyfisch package from the channel conda-forge!
+**Important Note:** For conda the channel bioconda needs to be set as highest priority! This is required due to two different packages with the same name in different channels. For the pipeline the package jellyfish from the channel bioconda is needed and **NOT** the jellyfish package from the channel conda-forge!
 
 
 ## Quick Start
@@ -94,7 +94,7 @@ All arguments can be set in the configuration files
 For further information read the [documentation](https://github.molgen.mpg.de/loosolab/masterJLU2018/wiki).
 
 ## Known issues
-The Nextflow-script needs a conda enviroment to run. Nextflow creates the needed enviroment from the given yaml-file.
+The Nextflow-script needs a conda environment to run. Nextflow creates the needed environment from the given yaml-file.
 On some systems Nextflow exits the run with following error:
 ```
 Caused by:
@@ -103,11 +103,11 @@ Caused by:
   status : 143
   message:
 ```
-If this error occurs you have to create the enviroment before starting the pipeline.
-To create this enviroment you need the yml-file from the repository.
-Run the following commands to create the enviroment:
+If this error occurs you have to create the environment before starting the pipeline.
+To create this environment you need the yml-file from the repository.
+Run the following commands to create the environment:
 ```console
 path=[Path to given masterenv.yml file]
 conda env create --name masterenv -f $path
 ```
-When the enviroment is created, set the variable 'path_env' in the configuration file as the path to it.
+When the environment is created, set the variable 'path_env' in the configuration file as the path to it.