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deleting of unused code
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anastasiia committed Nov 21, 2018
1 parent 492d7f6 commit 8807ef6
Showing 1 changed file with 1 addition and 3 deletions.
4 changes: 1 addition & 3 deletions call_peaks.py
Original file line number Diff line number Diff line change
@@ -267,9 +267,7 @@ def find_peaks_from_bw(bed_dictionary, bw_file, window_length, step, percentage)
peak_end = int(positions[1])

scores_in_peak = np.nan_to_num(np.array(list(bw_open.values(chromosom, peak_start, peak_end)))) #save the scores to an array

peak_len = len(scores_in_peak)


peak_footprints, footprint_count = search_in_window(peak_footprints, footprint_count, chromosom, peak_start, peak_end, scores_in_peak, window_length, bed_dictionary[header], step, percentage)

for footprint_name in peak_footprints.keys():

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