Updated README.

README.md

@@ -83,15 +83,16 @@ Optional arguments:
 	--interation INT	Number of iterations done by glam2. More Interations: better results, higher runtime. (Default: 10000)
 	--tomtom_treshold float	Threshold for similarity score. (Default: 0.01)
 
-	Motif clustering:
+    Motif clustering:
 	--edge_weight INT Minimum weight of edges in motif-cluster-graph (Default: 5)
-	--motif_similarity_thresh FLOAT threshold for motif similarity score (Default: 0.00001)
+    --motif_similarity_thresh FLOAT threshold for motif similarity score (Default: 0.00001)
 
-	Creating GTF:
-	--tissues STRING Filter for tissue/category activity categorys as in JSON config (Default: None)
+    Creating GTF:
+    --tissues STRING Filter for tissue/category activity categorys as in JSON config (Default: None)
     --wd PATH current working directory for the script (default: ".")
     --dir PATH directory for saved Ensembl / UCSC file (default: "./data/")
     --out PATH directory for the output GTF (default: ".")
+    
 All arguments can be set in the configuration files.
  ```