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# masterJLU2018 | ||
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Tool for automaticly retrieving Regulatory Features based on [Ensembl Regulatory Build](http://www.ensembl.org/info/genome/funcgen/regulatory_build.html) | ||
and [UCSC-Table-Browser](https://genome.ucsc.edu/cgi-bin/hgTables). Generating a GTF-File with Activity Data for a customisable number of tissue- and celltype categories. | ||
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## Usage | ||
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python3 ./RegGTFExtractor.py organism [--tissue] | ||
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- organism = Source organism (currently supported homo_sapiens and mus_musculus) | ||
- --tissue[] = optional Parameter: List of Tissues based on ./config/celltypes_organism.json Filters the output by activity | ||
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## Dependencies | ||
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- Linux 64-bit | ||
- Python3 or newer |