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Update README.md
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renewiegandt authored Dec 10, 2018
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Expand Up @@ -42,6 +42,7 @@ When the enviroment is created, set the variable 'path_env' in the configuration
nextflow run pipeline.nf --input [BigWig-file] --bed [BED-file] --genome_fasta [FASTA-file] --jaspar_db [MEME-file]
```
## Parameters
For a detailed overview of all Parameters follow this [link](https://github.molgen.mpg.de/loosolab/masterJLU2018/wiki/Configuration).
```
Required arguments:
--input Path to BigWig-file
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